RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 LETMD1Q6P1Q0 360 aa24.52■■□□□ 1.52
CTSA-203ENST00000372459 SKA2Q8WVK7 121 aaPredicted RBP24.52■■□□□ 1.52
CTSA-203ENST00000372459 DTD2Q96FN9 168 aa24.52■■□□□ 1.52
CTSA-203ENST00000372459 SERPINI1Q99574 410 aa24.52■■□□□ 1.52
CTSA-203ENST00000372459 SLC25A23Q9BV35 468 aa24.52■■□□□ 1.52
CTSA-203ENST00000372459 TRIM54Q9BYV2 358 aa24.52■■□□□ 1.52
CTSA-203ENST00000372459 THAP10Q9P2Z0 257 aaPredicted RBP24.52■■□□□ 1.52
CTSA-203ENST00000372459 SPINT1O43278 529 aa24.51■■□□□ 1.51
CTSA-203ENST00000372459 KRT36O76013 467 aa24.51■■□□□ 1.51
CTSA-203ENST00000372459 RCN1Q15293 331 aa24.51■■□□□ 1.51
CTSA-203ENST00000372459 CCDC6Q16204 474 aa24.51■■□□□ 1.51
CTSA-203ENST00000372459 OGFOD2Q6N063 350 aa24.51■■□□□ 1.51
CTSA-203ENST00000372459 UBE2R2Q712K3 238 aaPredicted RBP24.51■■□□□ 1.51
CTSA-203ENST00000372459 CYP2U1Q7Z449 544 aa24.51■■□□□ 1.51
CTSA-203ENST00000372459 SPATA19Q7Z5L4 167 aa24.51■■□□□ 1.51
CTSA-203ENST00000372459 DSG4Q86SJ6 1040 aa24.51■■□□□ 1.51
CTSA-203ENST00000372459 DCBLD1Q8N8Z6 715 aa24.51■■□□□ 1.51
CTSA-203ENST00000372459 ELMO1Q92556 727 aa24.51■■□□□ 1.51
CTSA-203ENST00000372459 NPAS2Q99743 824 aa24.51■■□□□ 1.51
CTSA-203ENST00000372459 SLC12A9Q9BXP2 914 aa24.51■■□□□ 1.51
CTSA-203ENST00000372459 RIC8BQ9NVN3 520 aa24.51■■□□□ 1.51
CTSA-203ENST00000372459 GIMAP2Q9UG22 337 aa24.51■■□□□ 1.51
CTSA-203ENST00000372459 SGTAO43765 313 aa24.51■■□□□ 1.51
CTSA-203ENST00000372459 KAT7O95251 611 aa24.51■■□□□ 1.51
CTSA-203ENST00000372459 PRR35P0CG20 571 aa24.51■■□□□ 1.51
CTSA-203ENST00000372459 ADRB3P13945 408 aa24.51■■□□□ 1.51
CTSA-203ENST00000372459 GPX3P22352 226 aa24.51■■□□□ 1.51
CTSA-203ENST00000372459 IL12RB1P42701 662 aa24.51■■□□□ 1.51
CTSA-203ENST00000372459 CDKL1Q00532 357 aa24.51■■□□□ 1.51
CTSA-203ENST00000372459 GSTA3Q16772 222 aa24.51■■□□□ 1.51
CTSA-203ENST00000372459 MMEL1Q495T6 779 aa24.51■■□□□ 1.51
CTSA-203ENST00000372459 CES5AQ6NT32 575 aa24.51■■□□□ 1.51
CTSA-203ENST00000372459 OR4F6Q8NGB9 312 aa24.51■■□□□ 1.51
CTSA-203ENST00000372459 METTL6Q8TCB7 284 aa24.51■■□□□ 1.51
CTSA-203ENST00000372459 DNAJC9Q8WXX5 260 aa24.51■■□□□ 1.51
CTSA-203ENST00000372459 ELSPBP1Q96BH3 223 aa24.51■■□□□ 1.51
CTSA-203ENST00000372459 KXD1Q9BQD3 176 aa24.51■■□□□ 1.51
CTSA-203ENST00000372459 WDR41Q9HAD4 459 aa24.51■■□□□ 1.51
CTSA-203ENST00000372459 PARVBQ9HBI1 364 aa24.51■■□□□ 1.51
CTSA-203ENST00000372459 ARL15Q9NXU5 204 aa24.51■■□□□ 1.51
CTSA-203ENST00000372459 PDE10AQ9Y233 779 aa24.51■■□□□ 1.51
CTSA-203ENST00000372459 DOCK8Q8NF50 2099 aa24.5■■□□□ 1.51
CTSA-203ENST00000372459 C1QTNF3-AMACRE9PGA6 284 aa24.5■■□□□ 1.51
CTSA-203ENST00000372459 K7EPI3 171 aa24.5■■□□□ 1.51
CTSA-203ENST00000372459 AREL1O15033 823 aa24.5■■□□□ 1.51
CTSA-203ENST00000372459 SMNDC1O75940 238 aaKnown RBP eCLIP24.5■■□□□ 1.51
CTSA-203ENST00000372459 CAPN1P07384 714 aa24.5■■□□□ 1.51
CTSA-203ENST00000372459 SP140Q13342 867 aa24.5■■□□□ 1.51
CTSA-203ENST00000372459 PAOXQ6QHF9 649 aa24.5■■□□□ 1.51
CTSA-203ENST00000372459 BNC2Q6ZN30 1099 aaPredicted RBP24.5■■□□□ 1.51
CTSA-203ENST00000372459 NEK10Q6ZWH5 1172 aa24.5■■□□□ 1.51
CTSA-203ENST00000372459 MILR1Q7Z6M3 343 aa24.5■■□□□ 1.51
CTSA-203ENST00000372459 MIER2Q8N344 545 aa24.5■■□□□ 1.51
CTSA-203ENST00000372459 ASZ1Q8WWH4 475 aa24.5■■□□□ 1.51
CTSA-203ENST00000372459 ASB11Q8WXH4 323 aa24.5■■□□□ 1.51
CTSA-203ENST00000372459 ACOX2Q99424 681 aa24.5■■□□□ 1.51
CTSA-203ENST00000372459 GDF15Q99988 308 aa24.5■■□□□ 1.51
CTSA-203ENST00000372459 STX18Q9P2W9 335 aaKnown RBP24.5■■□□□ 1.51
CTSA-203ENST00000372459 ST14Q9Y5Y6 855 aa24.5■■□□□ 1.51
CTSA-203ENST00000372459 PABPN1LA6NDY0 278 aaKnown RBP24.49■■□□□ 1.51
CTSA-203ENST00000372459 OR2AG2A6NM03 316 aa24.49■■□□□ 1.51
CTSA-203ENST00000372459 SLC16A5O15375 505 aa24.49■■□□□ 1.51
CTSA-203ENST00000372459 HIST1H2AGP0C0S8 130 aaPredicted RBP24.49■■□□□ 1.51
CTSA-203ENST00000372459 IDO1P14902 403 aa24.49■■□□□ 1.51
CTSA-203ENST00000372459 HIST1H2ADP20671 130 aa24.49■■□□□ 1.51
CTSA-203ENST00000372459 TRAF3Q13114 568 aa24.49■■□□□ 1.51
CTSA-203ENST00000372459 ZNF648Q5T619 568 aaPredicted RBP24.49■■□□□ 1.51
CTSA-203ENST00000372459 TTC23LQ6PF05 361 aa24.49■■□□□ 1.51
CTSA-203ENST00000372459 HPS6Q86YV9 775 aa24.49■■□□□ 1.51
CTSA-203ENST00000372459 VRK3Q8IV63 474 aa24.49■■□□□ 1.51
CTSA-203ENST00000372459 HIST1H2AHQ96KK5 128 aa24.49■■□□□ 1.51
CTSA-203ENST00000372459 HIST1H2AJQ99878 128 aa24.49■■□□□ 1.51
CTSA-203ENST00000372459 H2AFJQ9BTM1 129 aa24.49■■□□□ 1.51
CTSA-203ENST00000372459 NVLO15381 856 aaKnown RBP24.49■■□□□ 1.51
CTSA-203ENST00000372459 STK16O75716 305 aa24.49■■□□□ 1.51
CTSA-203ENST00000372459 EPHX1P07099 455 aa24.49■■□□□ 1.51
CTSA-203ENST00000372459 GRIA2P42262 883 aa24.49■■□□□ 1.51
CTSA-203ENST00000372459 GDF5P43026 501 aa24.49■■□□□ 1.51
CTSA-203ENST00000372459 SLC34A1Q06495 639 aa24.49■■□□□ 1.51
CTSA-203ENST00000372459 REP15Q6BDI9 236 aa24.49■■□□□ 1.51
CTSA-203ENST00000372459 NUDT18Q6ZVK8 323 aa24.49■■□□□ 1.51
CTSA-203ENST00000372459 ERN2Q76MJ5 926 aaKnown RBP24.49■■□□□ 1.51
CTSA-203ENST00000372459 TCAIMQ8N3R3 496 aa24.49■■□□□ 1.51
CTSA-203ENST00000372459 OR9I1Q8NGQ6 314 aa24.49■■□□□ 1.51
CTSA-203ENST00000372459 CCDC124Q96CT7 223 aaKnown RBP24.49■■□□□ 1.51
CTSA-203ENST00000372459 CYP2A7P20853 494 aa24.48■■□□□ 1.51
CTSA-203ENST00000372459 GDI1P31150 447 aa24.48■■□□□ 1.51
CTSA-203ENST00000372459 PIK3CGP48736 1102 aa24.48■■□□□ 1.51
CTSA-203ENST00000372459 TMEM115Q12893 351 aaPredicted RBP24.48■■□□□ 1.51
CTSA-203ENST00000372459 RPS6KA2Q15349 733 aa24.48■■□□□ 1.51
CTSA-203ENST00000372459 MUM1Q2TAK8 710 aa24.48■■□□□ 1.51
CTSA-203ENST00000372459 MBOAT1Q6ZNC8 495 aa24.48■■□□□ 1.51
CTSA-203ENST00000372459 ZNF765Q7L2R6 523 aa24.48■■□□□ 1.51
CTSA-203ENST00000372459 MYLK4Q86YV6 388 aaPredicted RBP24.48■■□□□ 1.51
CTSA-203ENST00000372459 MMAAQ8IVH4 418 aaKnown RBP24.48■■□□□ 1.51
CTSA-203ENST00000372459 BEND7Q8N7W2 519 aaPredicted RBP24.48■■□□□ 1.51
CTSA-203ENST00000372459 NUS1Q96E22 293 aa24.48■■□□□ 1.51
CTSA-203ENST00000372459 CDRT15Q96T59 188 aa24.48■■□□□ 1.51
CTSA-203ENST00000372459 NMRK1Q9NWW6 199 aa24.48■■□□□ 1.51
CTSA-203ENST00000372459 POMPQ9Y244 141 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms