RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 PIAS1O75925 651 aa13.15□□□□□ -0.3
RAPGEF1-201ENST00000372189 ADH5P11766 374 aa13.15□□□□□ -0.3
RAPGEF1-201ENST00000372189 EPORP19235 508 aa13.15□□□□□ -0.3
RAPGEF1-201ENST00000372189 CCR3P51677 355 aa13.15□□□□□ -0.3
RAPGEF1-201ENST00000372189 BHLHB9Q6PI77 547 aa13.15□□□□□ -0.3
RAPGEF1-201ENST00000372189 PARGQ86W56 976 aa13.15□□□□□ -0.3
RAPGEF1-201ENST00000372189 ARMC8Q8IUR7 673 aa13.15□□□□□ -0.3
RAPGEF1-201ENST00000372189 ARL5BQ96KC2 179 aa13.15□□□□□ -0.3
RAPGEF1-201ENST00000372189 RPL10LQ96L21 214 aaKnown RBP13.15□□□□□ -0.3
RAPGEF1-201ENST00000372189 SAMD11Q96NU1 681 aa13.15□□□□□ -0.3
RAPGEF1-201ENST00000372189 CACNG4Q9UBN1 327 aa13.15□□□□□ -0.3
RAPGEF1-201ENST00000372189 IRAK2O43187 625 aa13.15□□□□□ -0.3
RAPGEF1-201ENST00000372189 UMPSP11172 480 aa13.15□□□□□ -0.3
RAPGEF1-201ENST00000372189 GNSP15586 552 aa13.15□□□□□ -0.3
RAPGEF1-201ENST00000372189 IL32P24001 234 aa13.15□□□□□ -0.3
RAPGEF1-201ENST00000372189 CBLBQ13191 982 aa13.15□□□□□ -0.3
RAPGEF1-201ENST00000372189 CLCA4Q14CN2 919 aa13.15□□□□□ -0.3
RAPGEF1-201ENST00000372189 PON2Q15165 354 aa13.15□□□□□ -0.3
RAPGEF1-201ENST00000372189 LDLRAD1Q5T700 205 aa13.15□□□□□ -0.3
RAPGEF1-201ENST00000372189 SPATA19Q7Z5L4 167 aa13.15□□□□□ -0.3
RAPGEF1-201ENST00000372189 DENND2DQ9H6A0 471 aaPredicted RBP13.15□□□□□ -0.3
RAPGEF1-201ENST00000372189 TRNAU1APQ9NX07 287 aaKnown RBP13.15□□□□□ -0.3
RAPGEF1-201ENST00000372189 EGFL7Q9UHF1 273 aa13.15□□□□□ -0.3
RAPGEF1-201ENST00000372189 SERPINA3P01011 423 aa13.15□□□□□ -0.3
RAPGEF1-201ENST00000372189 LINC00032P0C843 101 aa13.15□□□□□ -0.3
RAPGEF1-201ENST00000372189 ALPPL2P10696 532 aa13.15□□□□□ -0.3
RAPGEF1-201ENST00000372189 HNRNPLP14866 589 aaKnown RBP eCLIP13.15□□□□□ -0.35e-9■■■□□ 17.5
RAPGEF1-201ENST00000372189 KCNE1P15382 129 aa13.15□□□□□ -0.3
RAPGEF1-201ENST00000372189 CSKP41240 450 aa13.15□□□□□ -0.3
RAPGEF1-201ENST00000372189 SF1Q15637 639 aaKnown RBP13.15□□□□□ -0.3
RAPGEF1-201ENST00000372189 FBXO42Q6P3S6 717 aa13.15□□□□□ -0.3
RAPGEF1-201ENST00000372189 DAW1Q8N136 415 aa13.15□□□□□ -0.3
RAPGEF1-201ENST00000372189 SYNPOQ8N3V7 929 aa13.15□□□□□ -0.3
RAPGEF1-201ENST00000372189 OR2T34Q8NGX1 318 aa13.15□□□□□ -0.3
RAPGEF1-201ENST00000372189 OR2T3Q8NH03 318 aa13.15□□□□□ -0.3
RAPGEF1-201ENST00000372189 CD101Q93033 1021 aa13.15□□□□□ -0.3
RAPGEF1-201ENST00000372189 SLC9A7Q96T83 725 aa13.15□□□□□ -0.3
RAPGEF1-201ENST00000372189 ZSCAN5AQ9BUG6 496 aa13.15□□□□□ -0.3
RAPGEF1-201ENST00000372189 SPATA5L1Q9BVQ7 753 aa13.15□□□□□ -0.3
RAPGEF1-201ENST00000372189 PTGFRNQ9P2B2 879 aa13.15□□□□□ -0.3
RAPGEF1-201ENST00000372189 SH3BGRL2Q9UJC5 107 aa13.15□□□□□ -0.3
RAPGEF1-201ENST00000372189 SLC22A3O75751 556 aa13.15□□□□□ -0.3
RAPGEF1-201ENST00000372189 OR6A2O95222 327 aa13.15□□□□□ -0.3
RAPGEF1-201ENST00000372189 IL4RP24394 825 aa13.15□□□□□ -0.3
RAPGEF1-201ENST00000372189 ARL3P36405 182 aa13.15□□□□□ -0.3
RAPGEF1-201ENST00000372189 CDKN2BP42772 138 aa13.15□□□□□ -0.3
RAPGEF1-201ENST00000372189 PDGFRLQ15198 375 aa13.15□□□□□ -0.3
RAPGEF1-201ENST00000372189 FAM76BQ5HYJ3 339 aa13.15□□□□□ -0.3
RAPGEF1-201ENST00000372189 OR52L1Q8NGH7 329 aa13.15□□□□□ -0.3
RAPGEF1-201ENST00000372189 PHF10Q8WUB8 498 aaKnown RBP13.15□□□□□ -0.3
RAPGEF1-201ENST00000372189 NPEPPSL1A6NEC2 478 aa13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 RHPN2P1A8MT19 583 aa13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 E2F3O00716 465 aa13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 CCNKO75909 580 aa13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 UGT2B15P54855 530 aa13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 CYP4F2P78329 520 aa13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 CYP4F3Q08477 520 aa13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 C6orf52Q5T4I8 152 aa13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 CDYL2Q8N8U2 506 aa13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 GTPBP3Q969Y2 492 aaKnown RBP13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 RAD9AQ99638 391 aa13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 VPS25Q9BRG1 176 aa13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 TTLL2Q9BWV7 592 aa13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 ARHGAP39Q9C0H5 1083 aa13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 FBXO46Q6PJ61 603 aaPredicted RBP13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 CERS6Q6ZMG9 384 aa13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 ZC3H7AQ8IWR0 971 aaKnown RBP13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 PSMG2Q969U7 264 aa13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 HAPLN3Q96S86 360 aa13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 INTS10Q9NVR2 710 aaKnown RBP13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 MRPS33Q9Y291 106 aaKnown RBP13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 PCDHGC4Q9Y5F7 938 aa13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 ZNF780BQ9Y6R6 833 aa13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 TRBV23OR9-2A0A075B6M9 112 aa13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 M0R2N6 131 aa13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 AGPSO00116 658 aa13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 ADAMTS3O15072 1205 aa13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 TIE1P35590 1138 aa13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 HGSNATQ68CP4 663 aa13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 TAPT1Q6NXT6 567 aa13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 ADGRD1Q6QNK2 874 aa13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 CHSY3Q70JA7 882 aa13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 PGAM4Q8N0Y7 254 aa13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 CLEC4CQ8WTT0 213 aa13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 TCEAL3Q969E4 200 aa13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 OSBPL7Q9BZF2 842 aa13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 TRAF6Q9Y4K3 522 aa13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 LYVE1Q9Y5Y7 322 aa13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 LOC110117498-PIK3R3F6TDL0 507 aa13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 SERPINA1P01009 418 aa13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 PKMP14618 531 aaKnown RBP13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 MAT2AP31153 395 aaKnown RBP13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 CAPGP40121 348 aa13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 SPIBQ01892 262 aa13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 TRIM32Q13049 653 aa13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 DLG2Q15700 870 aa13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 TCEAL5Q5H9L2 206 aa13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 GK5Q6ZS86 529 aa13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 CUZD1Q86UP6 607 aa13.14□□□□□ -0.31
RAPGEF1-201ENST00000372189 POF1BQ8WVV4 589 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms