RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 STEAP4Q687X5 459 aa14.74□□□□□ -0.05
SMPDL3A-201ENST00000368440 PTRHD1Q6GMV3 140 aaKnown RBP14.74□□□□□ -0.05
SMPDL3A-201ENST00000368440 WDR93Q6P2C0 686 aa14.74□□□□□ -0.05
SMPDL3A-201ENST00000368440 TMEM26Q6ZUK4 368 aa14.74□□□□□ -0.05
SMPDL3A-201ENST00000368440 ZBED8Q8IZ13 594 aa14.74□□□□□ -0.05
SMPDL3A-201ENST00000368440 WDR48Q8TAF3 677 aa14.74□□□□□ -0.05
SMPDL3A-201ENST00000368440 ZBTB9Q96C00 473 aa14.74□□□□□ -0.05
SMPDL3A-201ENST00000368440 CERS2Q96G23 380 aa14.74□□□□□ -0.05
SMPDL3A-201ENST00000368440 DEPDC7Q96QD5 511 aa14.74□□□□□ -0.05
SMPDL3A-201ENST00000368440 TCF12Q99081 682 aa14.74□□□□□ -0.05
SMPDL3A-201ENST00000368440 GNPTGQ9UJJ9 305 aa14.74□□□□□ -0.05
SMPDL3A-201ENST00000368440 ENTPD2Q9Y5L3 495 aa14.74□□□□□ -0.05
SMPDL3A-201ENST00000368440 UNC13CQ8NB66 2214 aa14.73□□□□□ -0.05
SMPDL3A-201ENST00000368440 ASPMQ8IZT6 3477 aa14.73□□□□□ -0.05
SMPDL3A-201ENST00000368440 LIN7AO14910 233 aaPredicted RBP14.73□□□□□ -0.05
SMPDL3A-201ENST00000368440 NIPSNAP2O75323 286 aa14.73□□□□□ -0.05
SMPDL3A-201ENST00000368440 GSTM1P09488 218 aa14.73□□□□□ -0.05
SMPDL3A-201ENST00000368440 MAPK9P45984 424 aa14.73□□□□□ -0.05
SMPDL3A-201ENST00000368440 CARSP49589 748 aaKnown RBP14.73□□□□□ -0.05
SMPDL3A-201ENST00000368440 GSTM4Q03013 218 aa14.73□□□□□ -0.05
SMPDL3A-201ENST00000368440 MAP9Q49MG5 647 aa14.73□□□□□ -0.05
SMPDL3A-201ENST00000368440 RNF187Q5TA31 235 aaPredicted RBP14.73□□□□□ -0.05
SMPDL3A-201ENST00000368440 VRK3Q8IV63 474 aa14.73□□□□□ -0.05
SMPDL3A-201ENST00000368440 IFT20Q8IY31 132 aa14.73□□□□□ -0.05
SMPDL3A-201ENST00000368440 SEC14L1Q92503 715 aa14.73□□□□□ -0.05
SMPDL3A-201ENST00000368440 SH3KBP1Q96B97 665 aa14.73□□□□□ -0.05
SMPDL3A-201ENST00000368440 FAM136AQ96C01 138 aa14.73□□□□□ -0.05
SMPDL3A-201ENST00000368440 TMEM121BQ9BXQ6 578 aaPredicted RBP14.73□□□□□ -0.05
SMPDL3A-201ENST00000368440 SAYSD1Q9NPB0 183 aa14.73□□□□□ -0.05
SMPDL3A-201ENST00000368440 INTS10Q9NVR2 710 aaKnown RBP14.73□□□□□ -0.05
SMPDL3A-201ENST00000368440 TMEM9Q9P0T7 183 aa14.73□□□□□ -0.05
SMPDL3A-201ENST00000368440 FBXO5Q9UKT4 447 aa14.73□□□□□ -0.05
SMPDL3A-201ENST00000368440 CDYLQ9Y232 598 aa14.73□□□□□ -0.05
SMPDL3A-201ENST00000368440 CCDC151A5D8V7 595 aa14.72□□□□□ -0.05
SMPDL3A-201ENST00000368440 LILRA5A6NI73 299 aa14.72□□□□□ -0.05
SMPDL3A-201ENST00000368440 ERLIN1O75477 346 aa14.72□□□□□ -0.05
SMPDL3A-201ENST00000368440 HOXB3P14651 431 aaPredicted RBP14.72□□□□□ -0.05
SMPDL3A-201ENST00000368440 MCM3P25205 808 aa14.72□□□□□ -0.05
SMPDL3A-201ENST00000368440 RPA4Q13156 261 aa14.72□□□□□ -0.05
SMPDL3A-201ENST00000368440 SYTL3Q4VX76 610 aa14.72□□□□□ -0.05
SMPDL3A-201ENST00000368440 ZNF549Q6P9A3 640 aa14.72□□□□□ -0.05
SMPDL3A-201ENST00000368440 ZNF574Q6ZN55 896 aaPredicted RBP14.72□□□□□ -0.05
SMPDL3A-201ENST00000368440 LRRC6Q86X45 466 aa14.72□□□□□ -0.05
SMPDL3A-201ENST00000368440 CACTIN-AS1Q8N1I8 211 aa14.72□□□□□ -0.05
SMPDL3A-201ENST00000368440 AVL9Q8NBF6 648 aa14.72□□□□□ -0.05
SMPDL3A-201ENST00000368440 GATA6Q92908 595 aa14.72□□□□□ -0.05
SMPDL3A-201ENST00000368440 ATXN7L3BQ96GX2 97 aa14.72□□□□□ -0.05
SMPDL3A-201ENST00000368440 FAM167BQ9BTA0 163 aa14.72□□□□□ -0.05
SMPDL3A-201ENST00000368440 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.72□□□□□ -0.05
SMPDL3A-201ENST00000368440 OGFRQ9NZT2 677 aa14.72□□□□□ -0.05
SMPDL3A-201ENST00000368440 GALPQ9UBC7 116 aa14.72□□□□□ -0.05
SMPDL3A-201ENST00000368440 KIF26BQ2KJY2 2108 aa14.72□□□□□ -0.05
SMPDL3A-201ENST00000368440 A0A1W2PNU3 283 aaPredicted RBP14.72□□□□□ -0.05
SMPDL3A-201ENST00000368440 PMS2P1A4D2B8 440 aa14.72□□□□□ -0.05
SMPDL3A-201ENST00000368440 HAUS5O94927 633 aa14.72□□□□□ -0.05
SMPDL3A-201ENST00000368440 CPNE6O95741 557 aa14.72□□□□□ -0.05
SMPDL3A-201ENST00000368440 MPSTP25325 297 aa14.72□□□□□ -0.05
SMPDL3A-201ENST00000368440 AOAHP28039 575 aa14.72□□□□□ -0.05
SMPDL3A-201ENST00000368440 PPM1FP49593 454 aaPredicted RBP14.72□□□□□ -0.05
SMPDL3A-201ENST00000368440 ADARP55265 1226 aaKnown RBP14.72□□□□□ -0.05
SMPDL3A-201ENST00000368440 HSPA14Q0VDF9 509 aa14.72□□□□□ -0.05
SMPDL3A-201ENST00000368440 CNSTQ6PJW8 725 aa14.72□□□□□ -0.05
SMPDL3A-201ENST00000368440 CAPN12Q6ZSI9 719 aa14.72□□□□□ -0.05
SMPDL3A-201ENST00000368440 PDZD3Q86UT5 571 aa14.72□□□□□ -0.05
SMPDL3A-201ENST00000368440 SLITRK4Q8IW52 837 aa14.72□□□□□ -0.05
SMPDL3A-201ENST00000368440 LMNTD2Q8IXW0 634 aa14.72□□□□□ -0.05
SMPDL3A-201ENST00000368440 C2CD4AQ8NCU7 369 aaPredicted RBP14.72□□□□□ -0.05
SMPDL3A-201ENST00000368440 PHC3Q8NDX5 983 aa14.72□□□□□ -0.05
SMPDL3A-201ENST00000368440 CALML6Q8TD86 181 aa14.72□□□□□ -0.05
SMPDL3A-201ENST00000368440 NRTNQ99748 197 aa14.72□□□□□ -0.05
SMPDL3A-201ENST00000368440 SEMA6CQ9H3T2 930 aa14.72□□□□□ -0.05
SMPDL3A-201ENST00000368440 UCK1Q9HA47 277 aa14.72□□□□□ -0.05
SMPDL3A-201ENST00000368440 ZDHHC18Q9NUE0 388 aa14.72□□□□□ -0.05
SMPDL3A-201ENST00000368440 ZNF446Q9NWS9 450 aa14.72□□□□□ -0.05
SMPDL3A-201ENST00000368440 NFU1Q9UMS0 254 aa14.72□□□□□ -0.05
SMPDL3A-201ENST00000368440 CEP295Q9C0D2 2601 aa14.71□□□□□ -0.05
SMPDL3A-201ENST00000368440 AGRPO00253 132 aa14.71□□□□□ -0.05
SMPDL3A-201ENST00000368440 PFDN6O15212 129 aa14.71□□□□□ -0.05
SMPDL3A-201ENST00000368440 GPC4O75487 556 aa14.71□□□□□ -0.05
SMPDL3A-201ENST00000368440 ESR1P03372 595 aa14.71□□□□□ -0.05
SMPDL3A-201ENST00000368440 PKMP14618 531 aaKnown RBP14.71□□□□□ -0.05
SMPDL3A-201ENST00000368440 TYRP1P17643 537 aa14.71□□□□□ -0.05
SMPDL3A-201ENST00000368440 GABRB3P28472 473 aa14.71□□□□□ -0.05
SMPDL3A-201ENST00000368440 ABCG1P45844 678 aa14.71□□□□□ -0.05
SMPDL3A-201ENST00000368440 EPHA4P54764 986 aa14.71□□□□□ -0.05
SMPDL3A-201ENST00000368440 GPLD1P80108 840 aa14.71□□□□□ -0.05
SMPDL3A-201ENST00000368440 CAV1Q03135 178 aa14.71□□□□□ -0.05
SMPDL3A-201ENST00000368440 PIM3Q86V86 326 aa14.71□□□□□ -0.05
SMPDL3A-201ENST00000368440 CCDC25Q86WR0 208 aa14.71□□□□□ -0.05
SMPDL3A-201ENST00000368440 CNTN4Q8IWV2 1026 aa14.71□□□□□ -0.05
SMPDL3A-201ENST00000368440 OR10G6Q8NH81 332 aa14.71□□□□□ -0.05
SMPDL3A-201ENST00000368440 RSC1A1Q92681 617 aa14.71□□□□□ -0.05
SMPDL3A-201ENST00000368440 AHCYL2Q96HN2 611 aaKnown RBP14.71□□□□□ -0.05
SMPDL3A-201ENST00000368440 TSSK1BQ9BXA7 367 aa14.71□□□□□ -0.05
SMPDL3A-201ENST00000368440 PPANQ9NQ55 473 aaKnown RBP14.71□□□□□ -0.05
SMPDL3A-201ENST00000368440 MED16Q9Y2X0 877 aa14.71□□□□□ -0.05
SMPDL3A-201ENST00000368440 TRABD2BA6NFA1 517 aa14.7□□□□□ -0.06
SMPDL3A-201ENST00000368440 C1QTNF9BB2RNN3 333 aa14.7□□□□□ -0.06
SMPDL3A-201ENST00000368440 F8W8V4 182 aa14.7□□□□□ -0.06
SMPDL3A-201ENST00000368440 IFRD1O00458 451 aaPredicted RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms