RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 JAK1P23458 1154 aa11.41□□□□□ -0.58
SYNE1-204ENST00000367248 AVPR1BP47901 424 aa11.41□□□□□ -0.58
SYNE1-204ENST00000367248 RPL26P61254 145 aaKnown RBP11.41□□□□□ -0.58
SYNE1-204ENST00000367248 SLC43A3Q8NBI5 491 aa11.41□□□□□ -0.58
SYNE1-204ENST00000367248 HOPXQ9BPY8 73 aaPredicted RBP11.41□□□□□ -0.58
SYNE1-204ENST00000367248 ZSCAN5AQ9BUG6 496 aa11.41□□□□□ -0.58
SYNE1-204ENST00000367248 RPL26L1Q9UNX3 145 aaKnown RBP11.41□□□□□ -0.58
SYNE1-204ENST00000367248 HCN4Q9Y3Q4 1203 aa11.41□□□□□ -0.58
SYNE1-204ENST00000367248 RGPD8O14715 1765 aaPredicted RBP11.41□□□□□ -0.58
SYNE1-204ENST00000367248 SUV39H1O43463 412 aa11.41□□□□□ -0.58
SYNE1-204ENST00000367248 UROSP10746 265 aa11.41□□□□□ -0.58
SYNE1-204ENST00000367248 PCSK2P16519 638 aa11.41□□□□□ -0.58
SYNE1-204ENST00000367248 HOXC12P31275 282 aa11.41□□□□□ -0.58
SYNE1-204ENST00000367248 DEFB103AP81534 67 aa11.41□□□□□ -0.58
SYNE1-204ENST00000367248 CST9Q5W186 159 aa11.41□□□□□ -0.58
SYNE1-204ENST00000367248 GK5Q6ZS86 529 aa11.41□□□□□ -0.58
SYNE1-204ENST00000367248 TRIM74Q86UV6 250 aa11.41□□□□□ -0.58
SYNE1-204ENST00000367248 RNASE11Q8TAA1 199 aaKnown RBP11.41□□□□□ -0.58
SYNE1-204ENST00000367248 MAGEL2Q9UJ55 1249 aa11.41□□□□□ -0.58
SYNE1-204ENST00000367248 ANKRD66B4E2M5 251 aa11.41□□□□□ -0.58
SYNE1-204ENST00000367248 TPD52L2O43399 206 aaKnown RBP11.41□□□□□ -0.58
SYNE1-204ENST00000367248 OAZ2O95190 189 aa11.41□□□□□ -0.58
SYNE1-204ENST00000367248 F7P08709 466 aaPredicted RBP11.41□□□□□ -0.58
SYNE1-204ENST00000367248 VIPR1P32241 457 aa11.41□□□□□ -0.58
SYNE1-204ENST00000367248 SIRPB2Q5JXA9 342 aa11.41□□□□□ -0.58
SYNE1-204ENST00000367248 C1orf220Q5T0J3 134 aa11.41□□□□□ -0.58
SYNE1-204ENST00000367248 TXNDC5Q8NBS9 432 aaKnown RBP11.41□□□□□ -0.58
SYNE1-204ENST00000367248 OR52L1Q8NGH7 329 aa11.41□□□□□ -0.58
SYNE1-204ENST00000367248 PHF10Q8WUB8 498 aaKnown RBP11.41□□□□□ -0.58
SYNE1-204ENST00000367248 TLCD1Q96CP7 247 aa11.41□□□□□ -0.58
SYNE1-204ENST00000367248 SLC2A13Q96QE2 648 aa11.41□□□□□ -0.58
SYNE1-204ENST00000367248 MIPEPQ99797 713 aa11.41□□□□□ -0.58
SYNE1-204ENST00000367248 MRPS30Q9NP92 439 aaKnown RBP11.41□□□□□ -0.58
SYNE1-204ENST00000367248 FLRT1Q9NZU1 646 aa11.41□□□□□ -0.58
SYNE1-204ENST00000367248 MTRRQ9UBK8 725 aa11.41□□□□□ -0.58
SYNE1-204ENST00000367248 RGS17Q9UGC6 210 aaPredicted RBP11.41□□□□□ -0.58
SYNE1-204ENST00000367248 HCN2Q9UL51 889 aa11.41□□□□□ -0.58
SYNE1-204ENST00000367248 PLGP00747 810 aaPredicted RBP11.41□□□□□ -0.58
SYNE1-204ENST00000367248 BNC1Q01954 994 aa11.41□□□□□ -0.58
SYNE1-204ENST00000367248 SGCBQ16585 318 aa11.41□□□□□ -0.58
SYNE1-204ENST00000367248 ISLR2Q6UXK2 745 aa11.41□□□□□ -0.58
SYNE1-204ENST00000367248 GLIS1Q8NBF1 620 aa11.41□□□□□ -0.58
SYNE1-204ENST00000367248 MAGEE2Q8TD90 523 aaPredicted RBP11.41□□□□□ -0.58
SYNE1-204ENST00000367248 AFDNP55196 1824 aaKnown RBP11.41□□□□□ -0.58
SYNE1-204ENST00000367248 C2orf80Q0P641 193 aa11.41□□□□□ -0.58
SYNE1-204ENST00000367248 PAQR3Q6TCH7 311 aa11.41□□□□□ -0.58
SYNE1-204ENST00000367248 CLNKQ7Z7G1 428 aa11.41□□□□□ -0.58
SYNE1-204ENST00000367248 EBPLQ9BY08 206 aa11.41□□□□□ -0.58
SYNE1-204ENST00000367248 C3orf18Q9UK00 162 aa11.41□□□□□ -0.58
SYNE1-204ENST00000367248 DMTF1Q9Y222 760 aa11.41□□□□□ -0.58
SYNE1-204ENST00000367248 ENTPD5O75356 428 aa11.4□□□□□ -0.58
SYNE1-204ENST00000367248 PRPS2P11908 318 aa11.4□□□□□ -0.58
SYNE1-204ENST00000367248 EPCAMP16422 314 aa11.4□□□□□ -0.58
SYNE1-204ENST00000367248 SLC6A2P23975 617 aa11.4□□□□□ -0.58
SYNE1-204ENST00000367248 TAS2R50P59544 299 aa11.4□□□□□ -0.58
SYNE1-204ENST00000367248 C16orf72Q14CZ0 275 aa11.4□□□□□ -0.58
SYNE1-204ENST00000367248 EIF3MQ7L2H7 374 aaKnown RBP11.4□□□□□ -0.58
SYNE1-204ENST00000367248 C1orf74Q96LT6 269 aa11.4□□□□□ -0.58
SYNE1-204ENST00000367248 DDX28Q9NUL7 540 aaKnown RBP11.4□□□□□ -0.58
SYNE1-204ENST00000367248 CAB39Q9Y376 341 aaPredicted RBP11.4□□□□□ -0.58
SYNE1-204ENST00000367248 PCDHGB3Q9Y5G1 929 aa11.4□□□□□ -0.58
SYNE1-204ENST00000367248 NIPSNAP2O75323 286 aa11.4□□□□□ -0.58
SYNE1-204ENST00000367248 PROZP22891 400 aa11.4□□□□□ -0.58
SYNE1-204ENST00000367248 NDUFS1P28331 727 aa11.4□□□□□ -0.58
SYNE1-204ENST00000367248 IL12BP29460 328 aa11.4□□□□□ -0.58
SYNE1-204ENST00000367248 KCNJ2P63252 427 aa11.4□□□□□ -0.58
SYNE1-204ENST00000367248 CHRNA6Q15825 494 aa11.4□□□□□ -0.58
SYNE1-204ENST00000367248 ARHGAP36Q6ZRI8 547 aa11.4□□□□□ -0.58
SYNE1-204ENST00000367248 C14orf80Q86SX3 495 aa11.4□□□□□ -0.58
SYNE1-204ENST00000367248 PEBP4Q96S96 227 aa11.4□□□□□ -0.58
SYNE1-204ENST00000367248 ITM2CQ9NQX7 267 aa11.4□□□□□ -0.58
SYNE1-204ENST00000367248 ARL8BQ9NVJ2 186 aa11.4□□□□□ -0.58
SYNE1-204ENST00000367248 MYRFQ9Y2G1 1151 aa11.4□□□□□ -0.58
SYNE1-204ENST00000367248 TCRBV7S3A2A0A539 114 aa11.4□□□□□ -0.58
SYNE1-204ENST00000367248 GNB5O14775 395 aa11.4□□□□□ -0.58
SYNE1-204ENST00000367248 KLK3P07288 261 aaPredicted RBP11.4□□□□□ -0.58
SYNE1-204ENST00000367248 MAPK12P53778 367 aa11.4□□□□□ -0.58
SYNE1-204ENST00000367248 PITX1P78337 314 aaPredicted RBP11.4□□□□□ -0.58
SYNE1-204ENST00000367248 HSPB3Q12988 150 aa11.4□□□□□ -0.58
SYNE1-204ENST00000367248 KCNJ11Q14654 390 aa11.4□□□□□ -0.58
SYNE1-204ENST00000367248 MRPL10Q7Z7H8 261 aaKnown RBP11.4□□□□□ -0.58
SYNE1-204ENST00000367248 RTKNQ9BST9 563 aa11.4□□□□□ -0.58
SYNE1-204ENST00000367248 FNDC11Q9BVV2 318 aa11.4□□□□□ -0.58
SYNE1-204ENST00000367248 STRA6Q9BX79 667 aa11.4□□□□□ -0.58
SYNE1-204ENST00000367248 FZD3Q9NPG1 666 aa11.4□□□□□ -0.58
SYNE1-204ENST00000367248 B4GALT6Q9UBX8 382 aa11.4□□□□□ -0.58
SYNE1-204ENST00000367248 FTSJ1Q9UET6 329 aa11.4□□□□□ -0.58
SYNE1-204ENST00000367248 HEBP2Q9Y5Z4 205 aa11.4□□□□□ -0.58
SYNE1-204ENST00000367248 IQCMA0A1B0GVH7 501 aa11.4□□□□□ -0.58
SYNE1-204ENST00000367248 ZNF487B1APH4 448 aa11.4□□□□□ -0.58
SYNE1-204ENST00000367248 PEX12O00623 359 aa11.4□□□□□ -0.58
SYNE1-204ENST00000367248 MYL12BO14950 172 aa11.4□□□□□ -0.58
SYNE1-204ENST00000367248 TP73O15350 636 aa11.4□□□□□ -0.58
SYNE1-204ENST00000367248 MYL12AP19105 171 aa11.4□□□□□ -0.58
SYNE1-204ENST00000367248 RORBQ92753 470 aa11.4□□□□□ -0.58
SYNE1-204ENST00000367248 PPM1MQ96MI6 270 aa11.4□□□□□ -0.58
SYNE1-204ENST00000367248 CD207Q9UJ71 328 aa11.4□□□□□ -0.58
SYNE1-204ENST00000367248 PLAGL1Q9UM63 463 aa11.4□□□□□ -0.58
SYNE1-204ENST00000367248 PHF24Q9UPV7 400 aa11.4□□□□□ -0.58
SYNE1-204ENST00000367248 MFHAS1Q9Y4C4 1052 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms