RNA–Protein interactions for RNA: ENST00000361675.6

CALD1-201, Transcript of caldesmon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALD1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-201ENST00000361675 KCNH7Q9NS40 1196 aa8.97□□□□□ -0.97
CALD1-201ENST00000361675 TOPORSQ9NS56 1045 aaPredicted RBP8.97□□□□□ -0.97
CALD1-201ENST00000361675 SMPD3Q9NY59 655 aaPredicted RBP8.97□□□□□ -0.97
CALD1-201ENST00000361675 TMPRSS11EQ9UL52 423 aa8.97□□□□□ -0.97
CALD1-201ENST00000361675 SHOC2Q9UQ13 582 aa8.97□□□□□ -0.97
CALD1-201ENST00000361675 ENTPD4Q9Y227 616 aa8.97□□□□□ -0.97
CALD1-201ENST00000361675 RUVBL1Q9Y265 456 aaKnown RBP8.97□□□□□ -0.97
CALD1-201ENST00000361675 FADS2O95864 444 aaKnown RBP8.97□□□□□ -0.97
CALD1-201ENST00000361675 ADH1CP00326 375 aa8.97□□□□□ -0.97
CALD1-201ENST00000361675 CCR1P32246 355 aa8.97□□□□□ -0.97
CALD1-201ENST00000361675 NUDT1P36639 197 aa8.97□□□□□ -0.97
CALD1-201ENST00000361675 HCAR3P49019 387 aa8.97□□□□□ -0.97
CALD1-201ENST00000361675 SLC7A2P52569 658 aa8.97□□□□□ -0.97
CALD1-201ENST00000361675 KCNAB2Q13303 367 aa8.97□□□□□ -0.97
CALD1-201ENST00000361675 CAMK2DQ13557 499 aa8.97□□□□□ -0.97
CALD1-201ENST00000361675 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.97□□□□□ -0.976e-7■■■□□ 18.3
CALD1-201ENST00000361675 BCL7AQ4VC05 210 aa8.97□□□□□ -0.97
CALD1-201ENST00000361675 XKR3Q5GH77 459 aa8.97□□□□□ -0.97
CALD1-201ENST00000361675 LIN9Q5TKA1 542 aa8.97□□□□□ -0.97
CALD1-201ENST00000361675 CHMP1BQ7LBR1 199 aa8.97□□□□□ -0.97
CALD1-201ENST00000361675 LINC00523Q86TU6 105 aa8.97□□□□□ -0.97
CALD1-201ENST00000361675 RBM23Q86U06 439 aaKnown RBP8.97□□□□□ -0.97
CALD1-201ENST00000361675 COMMD7Q86VX2 200 aa8.97□□□□□ -0.97
CALD1-201ENST00000361675 SLC22A15Q8IZD6 547 aa8.97□□□□□ -0.97
CALD1-201ENST00000361675 PGAM4Q8N0Y7 254 aa8.97□□□□□ -0.97
CALD1-201ENST00000361675 NAXEQ8NCW5 288 aa8.97□□□□□ -0.97
CALD1-201ENST00000361675 LURAP1Q96LR2 239 aa8.97□□□□□ -0.97
CALD1-201ENST00000361675 LXNQ9BS40 222 aa8.97□□□□□ -0.97
CALD1-201ENST00000361675 RANBP3Q9H6Z4 567 aaPredicted RBP8.97□□□□□ -0.97
CALD1-201ENST00000361675 EXOSC4Q9NPD3 245 aaKnown RBP8.97□□□□□ -0.97
CALD1-201ENST00000361675 RAB6BQ9NRW1 208 aa8.97□□□□□ -0.97
CALD1-201ENST00000361675 GMPR2Q9P2T1 348 aaKnown RBP8.97□□□□□ -0.97
CALD1-201ENST00000361675 DNMT3BQ9UBC3 853 aaKnown RBP8.97□□□□□ -0.97
CALD1-201ENST00000361675 RPH3ALQ9UNE2 315 aa8.97□□□□□ -0.97
CALD1-201ENST00000361675 A0A0B4J269 797 aa8.97□□□□□ -0.97
CALD1-201ENST00000361675 C9JVG2 144 aa8.97□□□□□ -0.97
CALD1-201ENST00000361675 ACOX3O15254 700 aa8.97□□□□□ -0.97
CALD1-201ENST00000361675 TBC1D4O60343 1298 aa8.97□□□□□ -0.97
CALD1-201ENST00000361675 FZD6O60353 706 aa8.97□□□□□ -0.97
CALD1-201ENST00000361675 RECQL5O94762 991 aaPredicted RBP8.97□□□□□ -0.97
CALD1-201ENST00000361675 PRKAR1AP10644 381 aa8.97□□□□□ -0.97
CALD1-201ENST00000361675 CDH5P33151 784 aaPredicted RBP8.97□□□□□ -0.97
CALD1-201ENST00000361675 RPS9P46781 194 aaKnown RBP8.97□□□□□ -0.97
CALD1-201ENST00000361675 SOX10P56693 466 aa8.97□□□□□ -0.97
CALD1-201ENST00000361675 SLAMF1Q13291 335 aa8.97□□□□□ -0.97
CALD1-201ENST00000361675 MEP1AQ16819 746 aa8.97□□□□□ -0.97
CALD1-201ENST00000361675 GFOD2Q3B7J2 385 aa8.97□□□□□ -0.97
CALD1-201ENST00000361675 ZNF568Q3ZCX4 644 aa8.97□□□□□ -0.97
CALD1-201ENST00000361675 INTS11Q5TA45 600 aaKnown RBP8.97□□□□□ -0.97
CALD1-201ENST00000361675 LHFPL2Q6ZUX7 228 aa8.97□□□□□ -0.97
CALD1-201ENST00000361675 NRARPQ7Z6K4 114 aa8.97□□□□□ -0.97
CALD1-201ENST00000361675 TPRA1Q86W33 373 aa8.97□□□□□ -0.97
CALD1-201ENST00000361675 KRT73Q86Y46 540 aa8.97□□□□□ -0.97
CALD1-201ENST00000361675 LRRN4Q8WUT4 740 aa8.97□□□□□ -0.97
CALD1-201ENST00000361675 RPL3LQ92901 407 aaKnown RBP8.97□□□□□ -0.97
CALD1-201ENST00000361675 MTERF3Q96E29 417 aa8.97□□□□□ -0.97
CALD1-201ENST00000361675 ZDHHC12Q96GR4 267 aa8.97□□□□□ -0.97
CALD1-201ENST00000361675 BCL2L14Q9BZR8 327 aa8.97□□□□□ -0.97
CALD1-201ENST00000361675 PPIL3Q9H2H8 161 aaKnown RBP8.97□□□□□ -0.97
CALD1-201ENST00000361675 RERGLQ9H628 205 aa8.97□□□□□ -0.97
CALD1-201ENST00000361675 WDR26Q9H7D7 661 aa8.97□□□□□ -0.97
CALD1-201ENST00000361675 SSU72Q9NP77 194 aaKnown RBP8.97□□□□□ -0.97
CALD1-201ENST00000361675 AKIP1Q9NQ31 210 aa8.97□□□□□ -0.97
CALD1-201ENST00000361675 ZNF175Q9Y473 711 aa8.97□□□□□ -0.97
CALD1-201ENST00000361675 CACNG2Q9Y698 323 aa8.97□□□□□ -0.97
CALD1-201ENST00000361675 DHRS12A0PJE2 317 aa8.96□□□□□ -0.97
CALD1-201ENST00000361675 SGCEO43556 437 aa8.96□□□□□ -0.97
CALD1-201ENST00000361675 ASGR1P07306 291 aa8.96□□□□□ -0.97
CALD1-201ENST00000361675 NPR3P17342 541 aa8.96□□□□□ -0.97
CALD1-201ENST00000361675 CSKP41240 450 aa8.96□□□□□ -0.97
CALD1-201ENST00000361675 TAS2R40P59535 323 aa8.96□□□□□ -0.97
CALD1-201ENST00000361675 BST2Q10589 180 aaKnown RBP8.96□□□□□ -0.97
CALD1-201ENST00000361675 TSTA3Q13630 321 aaPredicted RBP8.96□□□□□ -0.97
CALD1-201ENST00000361675 HIST2H2ACQ16777 129 aaPredicted RBP8.96□□□□□ -0.97
CALD1-201ENST00000361675 KIF19Q2TAC6 998 aa8.96□□□□□ -0.97
CALD1-201ENST00000361675 ARMCX4Q5H9R4 360 aa8.96□□□□□ -0.97
CALD1-201ENST00000361675 NHSL2Q5HYW2 709 aa8.96□□□□□ -0.97
CALD1-201ENST00000361675 TPRG1LQ5T0D9 272 aa8.96□□□□□ -0.97
CALD1-201ENST00000361675 ATF7IP2Q5U623 682 aa8.96□□□□□ -0.97
CALD1-201ENST00000361675 CES4AQ5XG92 561 aa8.96□□□□□ -0.97
CALD1-201ENST00000361675 PAMR1Q6UXH9 720 aa8.96□□□□□ -0.97
CALD1-201ENST00000361675 GDPD3Q7L5L3 318 aa8.96□□□□□ -0.97
CALD1-201ENST00000361675 DPP9Q86TI2 863 aa8.96□□□□□ -0.97
CALD1-201ENST00000361675 RFX6Q8HWS3 928 aa8.96□□□□□ -0.97
CALD1-201ENST00000361675 MPP5Q8N3R9 675 aa8.96□□□□□ -0.97
CALD1-201ENST00000361675 OR9A1PQ8NGU1 263 aa8.96□□□□□ -0.97
CALD1-201ENST00000361675 NANPQ8TBE9 248 aa8.96□□□□□ -0.97
CALD1-201ENST00000361675 PPP1R13LQ8WUF5 828 aa8.96□□□□□ -0.97
CALD1-201ENST00000361675 UPF1Q92900 1129 aaKnown RBP eCLIP8.96□□□□□ -0.97
CALD1-201ENST00000361675 LPPQ93052 612 aa8.96□□□□□ -0.97
CALD1-201ENST00000361675 TEKT5Q96M29 485 aa8.96□□□□□ -0.97
CALD1-201ENST00000361675 TCF25Q9BQ70 676 aa8.96□□□□□ -0.97
CALD1-201ENST00000361675 RIMS4Q9H426 269 aaPredicted RBP8.96□□□□□ -0.97
CALD1-201ENST00000361675 SPON1Q9HCB6 807 aa8.96□□□□□ -0.97
CALD1-201ENST00000361675 ZNF358Q9NW07 568 aa8.96□□□□□ -0.97
CALD1-201ENST00000361675 BRCA2P51587 3418 aa8.96□□□□□ -0.98
CALD1-201ENST00000361675 CXorf49A8MYA2 514 aaPredicted RBP8.96□□□□□ -0.98
CALD1-201ENST00000361675 STX7O15400 261 aaKnown RBP8.96□□□□□ -0.98
CALD1-201ENST00000361675 PLA2G6O60733 806 aa8.96□□□□□ -0.98
CALD1-201ENST00000361675 ABCB7O75027 752 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms