RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.42■□□□□ 0.384e-7■■■■■ 30.7
RTN4-204ENST00000357732 ACTR8Q9H981 624 aa17.42■□□□□ 0.38
RTN4-204ENST00000357732 ADGRE2Q9UHX3 823 aa17.42■□□□□ 0.38
RTN4-204ENST00000357732 RGS14O43566 566 aa17.42■□□□□ 0.38
RTN4-204ENST00000357732 UGT2B11O75310 529 aa17.42■□□□□ 0.38
RTN4-204ENST00000357732 NIPSNAP2O75323 286 aa17.42■□□□□ 0.38
RTN4-204ENST00000357732 CELF2O95319 508 aaKnown RBP17.42■□□□□ 0.38
RTN4-204ENST00000357732 MC4RP32245 332 aa17.42■□□□□ 0.38
RTN4-204ENST00000357732 ZNF691Q5VV52 312 aa17.42■□□□□ 0.38
RTN4-204ENST00000357732 GOLGA7Q7Z5G4 137 aa17.42■□□□□ 0.38
RTN4-204ENST00000357732 ZNF598Q86UK7 904 aaKnown RBP17.42■□□□□ 0.38
RTN4-204ENST00000357732 IGFN1Q86VF2 1251 aa17.42■□□□□ 0.38
RTN4-204ENST00000357732 CIR1Q86X95 450 aaPredicted RBP17.42■□□□□ 0.38
RTN4-204ENST00000357732 MIB1Q86YT6 1006 aa17.42■□□□□ 0.38
RTN4-204ENST00000357732 HIPK1Q86Z02 1210 aa17.42■□□□□ 0.38
RTN4-204ENST00000357732 ZCCHC7Q8N3Z6 543 aaKnown RBP17.42■□□□□ 0.38
RTN4-204ENST00000357732 GTF2H4Q92759 462 aa17.42■□□□□ 0.38
RTN4-204ENST00000357732 NODALQ96S42 347 aa17.42■□□□□ 0.38
RTN4-204ENST00000357732 NEURL2Q9BR09 285 aa17.42■□□□□ 0.38
RTN4-204ENST00000357732 MROQ9BYG7 248 aa17.42■□□□□ 0.38
RTN4-204ENST00000357732 AMBRA1Q9C0C7 1298 aa17.42■□□□□ 0.38
RTN4-204ENST00000357732 WARS2Q9UGM6 360 aaKnown RBP17.42■□□□□ 0.38
RTN4-204ENST00000357732 ORC6Q9Y5N6 252 aa17.42■□□□□ 0.38
RTN4-204ENST00000357732 CORINQ9Y5Q5 1042 aa17.42■□□□□ 0.38
RTN4-204ENST00000357732 SLC28A1O00337 649 aa17.41■□□□□ 0.38
RTN4-204ENST00000357732 GNGT2O14610 69 aa17.41■□□□□ 0.38
RTN4-204ENST00000357732 SLC22A1O15245 554 aa17.41■□□□□ 0.38
RTN4-204ENST00000357732 BCAS1O75363 584 aaPredicted RBP17.41■□□□□ 0.38
RTN4-204ENST00000357732 WDR47O94967 919 aa17.41■□□□□ 0.38
RTN4-204ENST00000357732 HTR1AP08908 422 aa17.41■□□□□ 0.38
RTN4-204ENST00000357732 ITGAMP11215 1152 aa17.41■□□□□ 0.38
RTN4-204ENST00000357732 SOX11P35716 441 aa17.41■□□□□ 0.38
RTN4-204ENST00000357732 ISL1P61371 349 aa17.41■□□□□ 0.38
RTN4-204ENST00000357732 GTF2H2Q13888 395 aa17.41■□□□□ 0.38
RTN4-204ENST00000357732 ATG9BQ674R7 924 aa17.41■□□□□ 0.38
RTN4-204ENST00000357732 GTF2H2CQ6P1K8 395 aa17.41■□□□□ 0.38
RTN4-204ENST00000357732 SLC16A12Q6ZSM3 486 aa17.41■□□□□ 0.38
RTN4-204ENST00000357732 GPR149Q86SP6 731 aa17.41■□□□□ 0.38
RTN4-204ENST00000357732 C2orf69Q8N8R5 385 aa17.41■□□□□ 0.38
RTN4-204ENST00000357732 OR4F6Q8NGB9 312 aa17.41■□□□□ 0.38
RTN4-204ENST00000357732 FIG4Q92562 907 aa17.41■□□□□ 0.38
RTN4-204ENST00000357732 SH3YL1Q96HL8 342 aaPredicted RBP17.41■□□□□ 0.38
RTN4-204ENST00000357732 NSMCE3Q96MG7 304 aa17.41■□□□□ 0.38
RTN4-204ENST00000357732 ATAD3AQ9NVI7 634 aa17.41■□□□□ 0.38
RTN4-204ENST00000357732 VAPAQ9P0L0 249 aa17.41■□□□□ 0.38
RTN4-204ENST00000357732 LIMD1Q9UGP4 676 aa17.41■□□□□ 0.38
RTN4-204ENST00000357732 DHRS7Q9Y394 339 aa17.41■□□□□ 0.38
RTN4-204ENST00000357732 CCL27Q9Y4X3 112 aa17.41■□□□□ 0.38
RTN4-204ENST00000357732 POLR3HQ9Y535 204 aaPredicted RBP17.41■□□□□ 0.38
RTN4-204ENST00000357732 HSPE1-MOB4S4R3N1 261 aa17.41■□□□□ 0.38
RTN4-204ENST00000357732 TTC3P53804 2025 aa17.41■□□□□ 0.38
RTN4-204ENST00000357732 LOC100130705A0A1B0GUX0 176 aa17.4■□□□□ 0.38
RTN4-204ENST00000357732 SLC1A7O00341 560 aa17.4■□□□□ 0.38
RTN4-204ENST00000357732 OR7A17O14581 309 aa17.4■□□□□ 0.38
RTN4-204ENST00000357732 RAD51BO15315 384 aa17.4■□□□□ 0.38
RTN4-204ENST00000357732 KDELR3O43731 214 aa17.4■□□□□ 0.38
RTN4-204ENST00000357732 B4GALT3O60512 393 aa17.4■□□□□ 0.38
RTN4-204ENST00000357732 MRPS14O60783 128 aaKnown RBP17.4■□□□□ 0.38
RTN4-204ENST00000357732 COQ9O75208 318 aa17.4■□□□□ 0.38
RTN4-204ENST00000357732 ALOX5P09917 674 aa17.4■□□□□ 0.38
RTN4-204ENST00000357732 PCNAP12004 261 aa17.4■□□□□ 0.38
RTN4-204ENST00000357732 IL7RP16871 459 aa17.4■□□□□ 0.38
RTN4-204ENST00000357732 CD47Q08722 323 aa17.4■□□□□ 0.38
RTN4-204ENST00000357732 KCNAB2Q13303 367 aa17.4■□□□□ 0.38
RTN4-204ENST00000357732 ATP1A4Q13733 1029 aa17.4■□□□□ 0.38
RTN4-204ENST00000357732 OXA1LQ15070 435 aa17.4■□□□□ 0.38
RTN4-204ENST00000357732 TAF1CQ15572 869 aaPredicted RBP17.4■□□□□ 0.38
RTN4-204ENST00000357732 MAPKAPK3Q16644 382 aa17.4■□□□□ 0.38
RTN4-204ENST00000357732 NADSYN1Q6IA69 706 aa17.4■□□□□ 0.38
RTN4-204ENST00000357732 PSAPL1Q6NUJ1 521 aa17.4■□□□□ 0.38
RTN4-204ENST00000357732 FAM43BQ6ZT52 329 aaPredicted RBP17.4■□□□□ 0.38
RTN4-204ENST00000357732 SETD9Q8NE22 299 aa17.4■□□□□ 0.38
RTN4-204ENST00000357732 SCUBE2Q9NQ36 999 aa17.4■□□□□ 0.38
RTN4-204ENST00000357732 NECTIN3Q9NQS3 549 aa17.4■□□□□ 0.38
RTN4-204ENST00000357732 ASB1Q9Y576 335 aa17.4■□□□□ 0.38
RTN4-204ENST00000357732 GREB1Q4ZG55 1949 aa17.4■□□□□ 0.38
RTN4-204ENST00000357732 FAM220BPB1ANY3 271 aa17.4■□□□□ 0.38
RTN4-204ENST00000357732 J3QRK9 145 aa17.4■□□□□ 0.38
RTN4-204ENST00000357732 SYN3O14994 580 aa17.4■□□□□ 0.38
RTN4-204ENST00000357732 RECQL5O94762 991 aaPredicted RBP17.4■□□□□ 0.38
RTN4-204ENST00000357732 ARHGEF15O94989 841 aa17.4■□□□□ 0.38
RTN4-204ENST00000357732 GABARAPO95166 117 aa17.4■□□□□ 0.38
RTN4-204ENST00000357732 PRLP01236 227 aa17.4■□□□□ 0.38
RTN4-204ENST00000357732 PCMT1P22061 227 aa17.4■□□□□ 0.38
RTN4-204ENST00000357732 PSMD7P51665 324 aa17.4■□□□□ 0.38
RTN4-204ENST00000357732 CLCN7P51798 805 aa17.4■□□□□ 0.38
RTN4-204ENST00000357732 CDH4P55283 916 aa17.4■□□□□ 0.38
RTN4-204ENST00000357732 TRIM16LQ309B1 348 aa17.4■□□□□ 0.38
RTN4-204ENST00000357732 EGFLAMQ63HQ2 1017 aa17.4■□□□□ 0.38
RTN4-204ENST00000357732 PIANPQ8IYJ0 282 aa17.4■□□□□ 0.38
RTN4-204ENST00000357732 FBXL8Q96CD0 374 aa17.4■□□□□ 0.38
RTN4-204ENST00000357732 CDK5RAP1Q96SZ6 601 aaKnown RBP17.4■□□□□ 0.38
RTN4-204ENST00000357732 P2RY12Q9H244 342 aa17.4■□□□□ 0.38
RTN4-204ENST00000357732 TRIT1Q9H3H1 467 aaKnown RBP17.4■□□□□ 0.38
RTN4-204ENST00000357732 DCAF13Q9NV06 445 aaKnown RBP17.4■□□□□ 0.38
RTN4-204ENST00000357732 ERVW-1Q9UQF0 538 aa17.4■□□□□ 0.38
RTN4-204ENST00000357732 ZNF99A8MXY4 864 aaPredicted RBP17.39■□□□□ 0.38
RTN4-204ENST00000357732 CXCR6O00574 342 aa17.39■□□□□ 0.38
RTN4-204ENST00000357732 TBX18O95935 607 aa17.39■□□□□ 0.38
RTN4-204ENST00000357732 GLUD1P00367 558 aa17.39■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms