RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 RAB15P59190 212 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 ZNF33AQ06730 810 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 CDK5R2Q13319 367 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 TUBA3CQ13748 450 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 MFSD10Q14728 455 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 NPTX1Q15818 432 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 SOWAHCQ53LP3 525 aaPredicted RBP9.98□□□□□ -0.81
PTPRA-203ENST00000356147 COLEC12Q5KU26 742 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 CCDC117Q8IWD4 279 aaPredicted RBP9.98□□□□□ -0.81
PTPRA-203ENST00000356147 MFSD4AQ8N468 514 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 GOLM1Q8NBJ4 401 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 GPRC5AQ8NFJ5 357 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 STARD8Q92502 1023 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 MAGED4Q96JG8 741 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 ASB2Q96Q27 587 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 SCUBE2Q9NQ36 999 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 SMPD4Q9NXE4 827 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 SCHIP1Q9P0W5 487 aaPredicted RBP9.98□□□□□ -0.81
PTPRA-203ENST00000356147 B3GNT3Q9Y2A9 372 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 NEUROG3Q9Y4Z2 214 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 ZSWIM8A7E2V4 1837 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 A0A0D9SEW6 157 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 SMIM35A0A1B0GVV1 85 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 BCKDKO14874 412 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 CHRNA1P02708 482 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 MT-ND2P03891 347 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 GRK4P32298 578 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 DCTP40126 519 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 MASP1P48740 699 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 PHKG1Q16816 387 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 GPSM1Q86YR5 675 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 LEMD2Q8NC56 503 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 KLHDC9Q8NEP7 349 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 OR4F6Q8NGB9 312 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 NETO1Q8TDF5 533 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 RPRD1AQ96P16 312 aaPredicted RBP9.98□□□□□ -0.81
PTPRA-203ENST00000356147 SPON2Q9BUD6 331 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 EHD1Q9H4M9 534 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 ZNF408Q9H9D4 720 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 CSNK1G1Q9HCP0 422 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 ABCC13Q9NSE7 274 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.98□□□□□ -0.81
PTPRA-203ENST00000356147 PCDHB14Q9Y5E9 798 aa9.98□□□□□ -0.81
PTPRA-203ENST00000356147 UPK3BL1B0FP48 263 aa9.97□□□□□ -0.81
PTPRA-203ENST00000356147 UPK3BL2E5RIL1 263 aa9.97□□□□□ -0.81
PTPRA-203ENST00000356147 E2F3O00716 465 aa9.97□□□□□ -0.81
PTPRA-203ENST00000356147 TNPO2O14787 897 aaKnown RBP9.97□□□□□ -0.81
PTPRA-203ENST00000356147 ZNF682O95780 498 aa9.97□□□□□ -0.81
PTPRA-203ENST00000356147 DLGAP3O95886 979 aa9.97□□□□□ -0.81
PTPRA-203ENST00000356147 SERPINA1P01009 418 aa9.97□□□□□ -0.81
PTPRA-203ENST00000356147 BMP1P13497 986 aa9.97□□□□□ -0.81
PTPRA-203ENST00000356147 CD6P30203 668 aa9.97□□□□□ -0.81
PTPRA-203ENST00000356147 RGRP47804 291 aa9.97□□□□□ -0.81
PTPRA-203ENST00000356147 GJA8P48165 433 aa9.97□□□□□ -0.81
PTPRA-203ENST00000356147 NEK2P51955 445 aa9.97□□□□□ -0.81
PTPRA-203ENST00000356147 ZNF235Q14590 738 aa9.97□□□□□ -0.81
PTPRA-203ENST00000356147 CBX2Q14781 532 aaPredicted RBP9.97□□□□□ -0.81
PTPRA-203ENST00000356147 MS4A13Q5J8X5 152 aa9.97□□□□□ -0.81
PTPRA-203ENST00000356147 FBXL22Q6P050 247 aa9.97□□□□□ -0.81
PTPRA-203ENST00000356147 PLEKHG7Q6ZR37 379 aa9.97□□□□□ -0.81
PTPRA-203ENST00000356147 CYP4Z1Q86W10 505 aa9.97□□□□□ -0.81
PTPRA-203ENST00000356147 SCAIQ8N9R8 606 aa9.97□□□□□ -0.81
PTPRA-203ENST00000356147 OR56A4Q8NGH8 313 aa9.97□□□□□ -0.81
PTPRA-203ENST00000356147 RHEBL1Q8TAI7 183 aa9.97□□□□□ -0.81
PTPRA-203ENST00000356147 DACH2Q96NX9 599 aa9.97□□□□□ -0.81
PTPRA-203ENST00000356147 BRINP2Q9C0B6 783 aa9.97□□□□□ -0.81
PTPRA-203ENST00000356147 FAM105AQ9NUU6 356 aa9.97□□□□□ -0.81
PTPRA-203ENST00000356147 SLC25A37Q9NYZ2 338 aa9.97□□□□□ -0.81
PTPRA-203ENST00000356147 DNAJB9Q9UBS3 223 aa9.97□□□□□ -0.81
PTPRA-203ENST00000356147 INTS6Q9UL03 887 aaKnown RBP9.97□□□□□ -0.81
PTPRA-203ENST00000356147 ATP11BQ9Y2G3 1177 aa9.97□□□□□ -0.81
PTPRA-203ENST00000356147 BRCA1P38398 1863 aaKnown RBP9.97□□□□□ -0.81
PTPRA-203ENST00000356147 CXCR6O00574 342 aa9.97□□□□□ -0.81
PTPRA-203ENST00000356147 SCAMP3O14828 347 aaKnown RBP9.97□□□□□ -0.81
PTPRA-203ENST00000356147 UGT2B4P06133 528 aa9.97□□□□□ -0.81
PTPRA-203ENST00000356147 SPNP16150 400 aa9.97□□□□□ -0.81
PTPRA-203ENST00000356147 OR1E1P30953 314 aa9.97□□□□□ -0.81
PTPRA-203ENST00000356147 CYP4F3Q08477 520 aa9.97□□□□□ -0.81
PTPRA-203ENST00000356147 PON2Q15165 354 aa9.97□□□□□ -0.81
PTPRA-203ENST00000356147 ZRANB3Q5FWF4 1079 aa9.97□□□□□ -0.81
PTPRA-203ENST00000356147 COQ5Q5HYK3 327 aa9.97□□□□□ -0.81
PTPRA-203ENST00000356147 BRMS1LQ5PSV4 323 aa9.97□□□□□ -0.81
PTPRA-203ENST00000356147 SPATC1Q76KD6 591 aa9.97□□□□□ -0.81
PTPRA-203ENST00000356147 CEP68Q76N32 757 aa9.97□□□□□ -0.81
PTPRA-203ENST00000356147 NANOGNBQ7Z5D8 188 aa9.97□□□□□ -0.81
PTPRA-203ENST00000356147 NECAB2Q7Z6G3 386 aa9.97□□□□□ -0.81
PTPRA-203ENST00000356147 B3GNT8Q7Z7M8 397 aa9.97□□□□□ -0.81
PTPRA-203ENST00000356147 P2RY8Q86VZ1 359 aa9.97□□□□□ -0.81
PTPRA-203ENST00000356147 DCP2Q8IU60 420 aaKnown RBP9.97□□□□□ -0.81
PTPRA-203ENST00000356147 TTC9BQ8N6N2 239 aa9.97□□□□□ -0.81
PTPRA-203ENST00000356147 FAM83FQ8NEG4 500 aaPredicted RBP9.97□□□□□ -0.81
PTPRA-203ENST00000356147 NPLOC4Q8TAT6 608 aa9.97□□□□□ -0.81
PTPRA-203ENST00000356147 PYCR2Q96C36 320 aa9.97□□□□□ -0.81
PTPRA-203ENST00000356147 CNDP2Q96KP4 475 aaKnown RBP9.97□□□□□ -0.81
PTPRA-203ENST00000356147 SLX1AQ9BQ83 275 aa9.97□□□□□ -0.81
PTPRA-203ENST00000356147 WDR12Q9GZL7 423 aaKnown RBP9.97□□□□□ -0.81
PTPRA-203ENST00000356147 C6orf62Q9GZU0 229 aaPredicted RBP9.97□□□□□ -0.81
PTPRA-203ENST00000356147 MUC13Q9H3R2 512 aa9.97□□□□□ -0.81
PTPRA-203ENST00000356147 RNF167Q9H6Y7 350 aa9.97□□□□□ -0.81
PTPRA-203ENST00000356147 C8orf4Q9NR00 106 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms