RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 ZNF662Q6ZS27 426 aa16.29■□□□□ 0.2
PDLIM7-201ENST00000355572 LDB1Q86U70 411 aaPredicted RBP16.29■□□□□ 0.2
PDLIM7-201ENST00000355572 SPNS2Q8IVW8 549 aa16.29■□□□□ 0.2
PDLIM7-201ENST00000355572 HDAC10Q969S8 669 aa16.29■□□□□ 0.2
PDLIM7-201ENST00000355572 XKR8Q9H6D3 395 aa16.29■□□□□ 0.2
PDLIM7-201ENST00000355572 HRASLS2Q9NWW9 162 aa16.29■□□□□ 0.2
PDLIM7-201ENST00000355572 SMARCAL1Q9NZC9 954 aa16.29■□□□□ 0.2
PDLIM7-201ENST00000355572 TNRC6AQ8NDV7 1962 aaKnown RBP16.29■□□□□ 0.2
PDLIM7-201ENST00000355572 TCRBV7S3A2A0A539 114 aa16.28■□□□□ 0.2
PDLIM7-201ENST00000355572 PSMD3O43242 534 aa16.28■□□□□ 0.2
PDLIM7-201ENST00000355572 SPAG6O75602 509 aa16.28■□□□□ 0.2
PDLIM7-201ENST00000355572 FURINP09958 794 aa16.28■□□□□ 0.2
PDLIM7-201ENST00000355572 SLC35G4P0C7Q5 338 aa16.28■□□□□ 0.2
PDLIM7-201ENST00000355572 PRKAR1AP10644 381 aa16.28■□□□□ 0.2
PDLIM7-201ENST00000355572 STIP1P31948 543 aaKnown RBP16.28■□□□□ 0.2
PDLIM7-201ENST00000355572 FDFT1P37268 417 aa16.28■□□□□ 0.2
PDLIM7-201ENST00000355572 ACVR1Q04771 509 aa16.28■□□□□ 0.2
PDLIM7-201ENST00000355572 CDH17Q12864 832 aa16.28■□□□□ 0.2
PDLIM7-201ENST00000355572 GPR19Q15760 415 aa16.28■□□□□ 0.2
PDLIM7-201ENST00000355572 PWWP2BQ6NUJ5 590 aa16.28■□□□□ 0.2
PDLIM7-201ENST00000355572 LMNTD1Q8N9Z9 388 aa16.28■□□□□ 0.2
PDLIM7-201ENST00000355572 OR4E2Q8NGC2 313 aa16.28■□□□□ 0.2
PDLIM7-201ENST00000355572 ZDHHC12Q96GR4 267 aa16.28■□□□□ 0.2
PDLIM7-201ENST00000355572 SLC45A3Q96JT2 553 aa16.28■□□□□ 0.2
PDLIM7-201ENST00000355572 CCM2Q9BSQ5 444 aa16.28■□□□□ 0.2
PDLIM7-201ENST00000355572 ULBP3Q9BZM4 244 aa16.28■□□□□ 0.2
PDLIM7-201ENST00000355572 MARCH4Q9P2E8 410 aaPredicted RBP16.28■□□□□ 0.2
PDLIM7-201ENST00000355572 RPS6KL1Q9Y6S9 549 aa16.28■□□□□ 0.2
PDLIM7-201ENST00000355572 GCN1Q92616 2671 aaKnown RBP16.28■□□□□ 0.2
PDLIM7-201ENST00000355572 C17orf113A0A1B0GUU1 675 aa16.27■□□□□ 0.2
PDLIM7-201ENST00000355572 GOLGA6L3A6NEY3 463 aa16.27■□□□□ 0.2
PDLIM7-201ENST00000355572 BHMG1C9JSJ3 638 aaPredicted RBP16.27■□□□□ 0.2
PDLIM7-201ENST00000355572 BTN3A1O00481 513 aa16.27■□□□□ 0.2
PDLIM7-201ENST00000355572 FGGP02679 453 aa16.27■□□□□ 0.2
PDLIM7-201ENST00000355572 CCDC175P0C221 793 aa16.27■□□□□ 0.2
PDLIM7-201ENST00000355572 RALBP11234 206 aa16.27■□□□□ 0.2
PDLIM7-201ENST00000355572 PVRP15151 417 aa16.27■□□□□ 0.2
PDLIM7-201ENST00000355572 MAP4P27816 1152 aaKnown RBP16.27■□□□□ 0.2
PDLIM7-201ENST00000355572 ABHD18Q0P651 414 aa16.27■□□□□ 0.2
PDLIM7-201ENST00000355572 GSE1Q14687 1217 aa16.27■□□□□ 0.2
PDLIM7-201ENST00000355572 DNTTIP2Q5QJE6 756 aaKnown RBP16.27■□□□□ 0.2
PDLIM7-201ENST00000355572 TMEM135Q86UB9 458 aa16.27■□□□□ 0.2
PDLIM7-201ENST00000355572 RASGRP3Q8IV61 690 aa16.27■□□□□ 0.2
PDLIM7-201ENST00000355572 DNAAF3Q8N9W5 541 aa16.27■□□□□ 0.2
PDLIM7-201ENST00000355572 OR52E1Q8NGJ3 308 aa16.27■□□□□ 0.2
PDLIM7-201ENST00000355572 FERD3LQ96RJ6 166 aa16.27■□□□□ 0.2
PDLIM7-201ENST00000355572 RANBP9Q96S59 729 aa16.27■□□□□ 0.2
PDLIM7-201ENST00000355572 ZPBPQ9BS86 351 aa16.27■□□□□ 0.2
PDLIM7-201ENST00000355572 HGH1Q9BTY7 390 aa16.27■□□□□ 0.2
PDLIM7-201ENST00000355572 GPN2Q9H9Y4 310 aaPredicted RBP16.27■□□□□ 0.2
PDLIM7-201ENST00000355572 TCAF1Q9Y4C2 921 aa16.27■□□□□ 0.2
PDLIM7-201ENST00000355572 ZNF462Q96JM2 2506 aa16.27■□□□□ 0.2
PDLIM7-201ENST00000355572 MED13Q9UHV7 2174 aa16.26■□□□□ 0.19
PDLIM7-201ENST00000355572 SLC5A10A0PJK1 596 aa16.26■□□□□ 0.19
PDLIM7-201ENST00000355572 TLCD2A6NGC4 264 aa16.26■□□□□ 0.19
PDLIM7-201ENST00000355572 IQCF5A8MTL0 148 aa16.26■□□□□ 0.19
PDLIM7-201ENST00000355572 CFAP99D6REC4 459 aa16.26■□□□□ 0.19
PDLIM7-201ENST00000355572 HCRTR1O43613 425 aa16.26■□□□□ 0.19
PDLIM7-201ENST00000355572 ZNF189O75820 626 aaPredicted RBP16.26■□□□□ 0.19
PDLIM7-201ENST00000355572 ITGB2P05107 769 aa16.26■□□□□ 0.19
PDLIM7-201ENST00000355572 APRTP07741 180 aa16.26■□□□□ 0.19
PDLIM7-201ENST00000355572 ACADLP28330 430 aa16.26■□□□□ 0.19
PDLIM7-201ENST00000355572 TERF1P54274 439 aa16.26■□□□□ 0.19
PDLIM7-201ENST00000355572 CDC20Q12834 499 aa16.26■□□□□ 0.19
PDLIM7-201ENST00000355572 NFATC3Q12968 1075 aa16.26■□□□□ 0.19
PDLIM7-201ENST00000355572 PRKG2Q13237 762 aa16.26■□□□□ 0.19
PDLIM7-201ENST00000355572 TUBB3Q13509 450 aa16.26■□□□□ 0.19
PDLIM7-201ENST00000355572 BOP1Q14137 746 aaKnown RBP16.26■□□□□ 0.19
PDLIM7-201ENST00000355572 CCNG2Q16589 344 aa16.26■□□□□ 0.19
PDLIM7-201ENST00000355572 LCN10Q6JVE6 187 aa16.26■□□□□ 0.19
PDLIM7-201ENST00000355572 FAM199XQ6PEV8 388 aaPredicted RBP16.26■□□□□ 0.19
PDLIM7-201ENST00000355572 PPP1R21Q6ZMI0 780 aa16.26■□□□□ 0.19
PDLIM7-201ENST00000355572 LINC00523Q86TU6 105 aa16.26■□□□□ 0.19
PDLIM7-201ENST00000355572 OOSP2Q86WS3 158 aa16.26■□□□□ 0.19
PDLIM7-201ENST00000355572 VRK3Q8IV63 474 aa16.26■□□□□ 0.19
PDLIM7-201ENST00000355572 D2HGDHQ8N465 521 aa16.26■□□□□ 0.19
PDLIM7-201ENST00000355572 PRELID2Q8N945 189 aa16.26■□□□□ 0.19
PDLIM7-201ENST00000355572 SIDT2Q8NBJ9 832 aaKnown RBP16.26■□□□□ 0.19
PDLIM7-201ENST00000355572 SLC38A9Q8NBW4 561 aa16.26■□□□□ 0.19
PDLIM7-201ENST00000355572 OR5AR1Q8NGP9 310 aa16.26■□□□□ 0.19
PDLIM7-201ENST00000355572 STARD8Q92502 1023 aa16.26■□□□□ 0.19
PDLIM7-201ENST00000355572 FRMD8P1Q9BZ68 369 aaPredicted RBP16.26■□□□□ 0.19
PDLIM7-201ENST00000355572 KLHL25Q9H0H3 589 aa16.26■□□□□ 0.19
PDLIM7-201ENST00000355572 CHRAC1Q9NRG0 131 aa16.26■□□□□ 0.19
PDLIM7-201ENST00000355572 LNPEPQ9UIQ6 1025 aa16.26■□□□□ 0.19
PDLIM7-201ENST00000355572 CROTQ9UKG9 612 aa16.26■□□□□ 0.19
PDLIM7-201ENST00000355572 POMT2Q9UKY4 750 aa16.26■□□□□ 0.19
PDLIM7-201ENST00000355572 ICKQ9UPZ9 632 aa16.26■□□□□ 0.19
PDLIM7-201ENST00000355572 PPP2R2CQ9Y2T4 447 aa16.26■□□□□ 0.19
PDLIM7-201ENST00000355572 SLC9B1P1A6NJY1 282 aa16.25■□□□□ 0.19
PDLIM7-201ENST00000355572 ERI2A8K979 691 aaKnown RBP16.25■□□□□ 0.19
PDLIM7-201ENST00000355572 GOLGA6L6A8MZA4 724 aa16.25■□□□□ 0.19
PDLIM7-201ENST00000355572 B8ZZF3 427 aa16.25■□□□□ 0.19
PDLIM7-201ENST00000355572 NTRK1P04629 796 aa16.25■□□□□ 0.19
PDLIM7-201ENST00000355572 F7P08709 466 aaPredicted RBP16.25■□□□□ 0.19
PDLIM7-201ENST00000355572 ST6GAL1P15907 406 aa16.25■□□□□ 0.19
PDLIM7-201ENST00000355572 ARNTP27540 789 aa16.25■□□□□ 0.19
PDLIM7-201ENST00000355572 NMBRP28336 390 aa16.25■□□□□ 0.19
PDLIM7-201ENST00000355572 CSE1LP55060 971 aaKnown RBP16.25■□□□□ 0.19
PDLIM7-201ENST00000355572 ABRQ12979 859 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms