RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 ISCA2Q86U28 154 aa18.6■□□□□ 0.57
CHMP4A-201ENST00000347519 TMEM151AQ8N4L1 468 aa18.6■□□□□ 0.57
CHMP4A-201ENST00000347519 SPDYE1Q8NFV5 336 aaPredicted RBP18.6■□□□□ 0.57
CHMP4A-201ENST00000347519 TCP10LQ8TDR4 215 aa18.6■□□□□ 0.57
CHMP4A-201ENST00000347519 TMEM159Q96B96 161 aa18.6■□□□□ 0.57
CHMP4A-201ENST00000347519 ALKBH8Q96BT7 664 aaKnown RBP18.6■□□□□ 0.57
CHMP4A-201ENST00000347519 RMDN2Q96LZ7 410 aa18.6■□□□□ 0.57
CHMP4A-201ENST00000347519 LRRC61Q9BV99 259 aa18.6■□□□□ 0.57
CHMP4A-201ENST00000347519 OSGEPL1Q9H4B0 414 aa18.6■□□□□ 0.57
CHMP4A-201ENST00000347519 SSU72Q9NP77 194 aaKnown RBP18.6■□□□□ 0.57
CHMP4A-201ENST00000347519 TRNAU1APQ9NX07 287 aaKnown RBP18.6■□□□□ 0.57
CHMP4A-201ENST00000347519 SUSD2Q9UGT4 822 aa18.6■□□□□ 0.57
CHMP4A-201ENST00000347519 DCDC2Q9UHG0 476 aa18.6■□□□□ 0.57
CHMP4A-201ENST00000347519 ADAMTS6Q9UKP5 1117 aa18.6■□□□□ 0.57
CHMP4A-201ENST00000347519 PSMD13Q9UNM6 376 aa18.6■□□□□ 0.57
CHMP4A-201ENST00000347519 WDR37Q9Y2I8 494 aa18.6■□□□□ 0.57
CHMP4A-201ENST00000347519 PCDH15Q96QU1 1955 aa18.6■□□□□ 0.57
CHMP4A-201ENST00000347519 CACNA1EQ15878 2313 aa18.6■□□□□ 0.57
CHMP4A-201ENST00000347519 PIEZO1Q92508 2521 aa18.59■□□□□ 0.57
CHMP4A-201ENST00000347519 TMEM120BA0PK00 339 aa18.59■□□□□ 0.57
CHMP4A-201ENST00000347519 PRPF4O43172 522 aaKnown RBP eCLIP18.59■□□□□ 0.574e-7■□□□□ 10.7
CHMP4A-201ENST00000347519 EPN2O95208 641 aa18.59■□□□□ 0.57
CHMP4A-201ENST00000347519 GSTA1P08263 222 aa18.59■□□□□ 0.57
CHMP4A-201ENST00000347519 MPC1LP0DKB6 136 aa18.59■□□□□ 0.57
CHMP4A-201ENST00000347519 TFEBP19484 476 aa18.59■□□□□ 0.57
CHMP4A-201ENST00000347519 RPL10P27635 214 aaKnown RBP18.59■□□□□ 0.57
CHMP4A-201ENST00000347519 RGS4P49798 205 aa18.59■□□□□ 0.57
CHMP4A-201ENST00000347519 IRX4P78413 519 aa18.59■□□□□ 0.57
CHMP4A-201ENST00000347519 ABRQ12979 859 aa18.59■□□□□ 0.57
CHMP4A-201ENST00000347519 GPS2Q13227 327 aa18.59■□□□□ 0.57
CHMP4A-201ENST00000347519 SHBQ15464 509 aa18.59■□□□□ 0.57
CHMP4A-201ENST00000347519 TSNQ15631 228 aaKnown RBP18.59■□□□□ 0.57
CHMP4A-201ENST00000347519 SEPT7Q16181 437 aaKnown RBP18.59■□□□□ 0.57
CHMP4A-201ENST00000347519 CCDC6Q16204 474 aa18.59■□□□□ 0.57
CHMP4A-201ENST00000347519 TECRLQ5HYJ1 363 aa18.59■□□□□ 0.57
CHMP4A-201ENST00000347519 LRRC8EQ6NSJ5 796 aa18.59■□□□□ 0.57
CHMP4A-201ENST00000347519 CCDC91Q7Z6B0 441 aa18.59■□□□□ 0.57
CHMP4A-201ENST00000347519 RASGRP3Q8IV61 690 aa18.59■□□□□ 0.57
CHMP4A-201ENST00000347519 MDM1Q8TC05 714 aa18.59■□□□□ 0.57
CHMP4A-201ENST00000347519 GPBAR1Q8TDU6 330 aa18.59■□□□□ 0.57
CHMP4A-201ENST00000347519 DLG3Q92796 817 aa18.59■□□□□ 0.57
CHMP4A-201ENST00000347519 SELENOSQ9BQE4 189 aa18.59■□□□□ 0.57
CHMP4A-201ENST00000347519 WWP1Q9H0M0 922 aa18.59■□□□□ 0.57
CHMP4A-201ENST00000347519 SMOC1Q9H4F8 434 aa18.59■□□□□ 0.57
CHMP4A-201ENST00000347519 ALG9Q9H6U8 611 aa18.59■□□□□ 0.57
CHMP4A-201ENST00000347519 PRDM8Q9NQV8 689 aa18.59■□□□□ 0.57
CHMP4A-201ENST00000347519 TBC1D29Q9UFV1 150 aa18.59■□□□□ 0.57
CHMP4A-201ENST00000347519 APOBEC3BQ9UH17 382 aaKnown RBP18.59■□□□□ 0.57
CHMP4A-201ENST00000347519 PLLPQ9Y342 182 aa18.59■□□□□ 0.57
CHMP4A-201ENST00000347519 ARHGEF17Q96PE2 2063 aaPredicted RBP18.59■□□□□ 0.57
CHMP4A-201ENST00000347519 H3BM21 787 aa18.58■□□□□ 0.57
CHMP4A-201ENST00000347519 SNX2O60749 519 aa18.58■□□□□ 0.57
CHMP4A-201ENST00000347519 KCNJ13O60928 360 aa18.58■□□□□ 0.57
CHMP4A-201ENST00000347519 PROCP04070 461 aa18.58■□□□□ 0.57
CHMP4A-201ENST00000347519 ENO3P13929 434 aaPredicted RBP18.58■□□□□ 0.57
CHMP4A-201ENST00000347519 ACADLP28330 430 aa18.58■□□□□ 0.57
CHMP4A-201ENST00000347519 OAS2P29728 719 aaKnown RBP18.58■□□□□ 0.57
CHMP4A-201ENST00000347519 ACTR1BP42025 376 aa18.58■□□□□ 0.57
CHMP4A-201ENST00000347519 CCT5P48643 541 aa18.58■□□□□ 0.57
CHMP4A-201ENST00000347519 CLCNKAP51800 687 aa18.58■□□□□ 0.57
CHMP4A-201ENST00000347519 ACTR1AP61163 376 aa18.58■□□□□ 0.57
CHMP4A-201ENST00000347519 DUOXA1Q1HG43 343 aa18.58■□□□□ 0.57
CHMP4A-201ENST00000347519 FAM83EQ2M2I3 478 aa18.58■□□□□ 0.57
CHMP4A-201ENST00000347519 PRRT3Q5FWE3 981 aa18.58■□□□□ 0.57
CHMP4A-201ENST00000347519 AGAP9Q5VTM2 703 aa18.58■□□□□ 0.57
CHMP4A-201ENST00000347519 SLC30A9Q6PML9 568 aa18.58■□□□□ 0.57
CHMP4A-201ENST00000347519 MYO1HQ8N1T3 1032 aa18.58■□□□□ 0.57
CHMP4A-201ENST00000347519 FSTL5Q8N475 847 aaPredicted RBP18.58■□□□□ 0.57
CHMP4A-201ENST00000347519 ANKRD42Q8N9B4 389 aa18.58■□□□□ 0.57
CHMP4A-201ENST00000347519 DENND1AQ8TEH3 1009 aa18.58■□□□□ 0.57
CHMP4A-201ENST00000347519 SKA1Q96BD8 255 aa18.58■□□□□ 0.57
CHMP4A-201ENST00000347519 SCYL1Q96KG9 808 aa18.58■□□□□ 0.57
CHMP4A-201ENST00000347519 PKNOX2Q96KN3 472 aa18.58■□□□□ 0.57
CHMP4A-201ENST00000347519 ZDHHC5Q9C0B5 715 aa18.58■□□□□ 0.57
CHMP4A-201ENST00000347519 ARRDC1-AS1Q9H2J1 176 aa18.58■□□□□ 0.57
CHMP4A-201ENST00000347519 NMRAL1Q9HBL8 299 aa18.58■□□□□ 0.57
CHMP4A-201ENST00000347519 CAPN10Q9HC96 672 aa18.58■□□□□ 0.57
CHMP4A-201ENST00000347519 MLXIPLQ9NP71 852 aa18.58■□□□□ 0.57
CHMP4A-201ENST00000347519 SCHIP1Q9P0W5 487 aaPredicted RBP18.58■□□□□ 0.57
CHMP4A-201ENST00000347519 KRT87PA6NCN2 255 aa18.57■□□□□ 0.56
CHMP4A-201ENST00000347519 TK2O00142 265 aa18.57■□□□□ 0.56
CHMP4A-201ENST00000347519 EIF3FO00303 357 aaPredicted RBP18.57■□□□□ 0.56
CHMP4A-201ENST00000347519 BTN3A1O00481 513 aa18.57■□□□□ 0.56
CHMP4A-201ENST00000347519 PLIN3O60664 434 aa18.57■□□□□ 0.56
CHMP4A-201ENST00000347519 CFIP05156 583 aa18.57■□□□□ 0.56
CHMP4A-201ENST00000347519 ATP6V0D1P61421 351 aa18.57■□□□□ 0.56
CHMP4A-201ENST00000347519 PPP2R2AP63151 447 aa18.57■□□□□ 0.56
CHMP4A-201ENST00000347519 GRIK2Q13002 908 aa18.57■□□□□ 0.56
CHMP4A-201ENST00000347519 RPA4Q13156 261 aa18.57■□□□□ 0.56
CHMP4A-201ENST00000347519 LRP8Q14114 963 aa18.57■□□□□ 0.56
CHMP4A-201ENST00000347519 CLCA4Q14CN2 919 aa18.57■□□□□ 0.56
CHMP4A-201ENST00000347519 TSNAXIP1Q2TAA8 658 aa18.57■□□□□ 0.56
CHMP4A-201ENST00000347519 CAPRIN2Q6IMN6 1127 aaKnown RBP18.57■□□□□ 0.56
CHMP4A-201ENST00000347519 LVRNQ6Q4G3 990 aa18.57■□□□□ 0.56
CHMP4A-201ENST00000347519 SBSNQ6UWP8 590 aa18.57■□□□□ 0.56
CHMP4A-201ENST00000347519 NEK10Q6ZWH5 1172 aa18.57■□□□□ 0.56
CHMP4A-201ENST00000347519 SFTPA2Q8IWL1 248 aa18.57■□□□□ 0.56
CHMP4A-201ENST00000347519 CFAP61Q8NHU2 1237 aa18.57■□□□□ 0.56
CHMP4A-201ENST00000347519 KIAA1191Q96A73 305 aa18.57■□□□□ 0.56
CHMP4A-201ENST00000347519 FAM111AQ96PZ2 611 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms