RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 OR56B2PQ8NGI1 322 aa17.41■□□□□ 0.38
SMAD4-201ENST00000342988 HTR3EA5X5Y0 456 aa17.4■□□□□ 0.38
SMAD4-201ENST00000342988 TSPAN15O95858 294 aa17.4■□□□□ 0.38
SMAD4-201ENST00000342988 ICAM1P05362 532 aa17.4■□□□□ 0.38
SMAD4-201ENST00000342988 ALPPL2P10696 532 aa17.4■□□□□ 0.38
SMAD4-201ENST00000342988 TCEA1P23193 301 aaKnown RBP17.4■□□□□ 0.38
SMAD4-201ENST00000342988 TSNAXQ99598 290 aaKnown RBP17.4■□□□□ 0.38
SMAD4-201ENST00000342988 SPIN1Q9Y657 262 aaPredicted RBP17.4■□□□□ 0.38
SMAD4-201ENST00000342988 A8MXE2 369 aa17.4■□□□□ 0.38
SMAD4-201ENST00000342988 PRKCHP24723 683 aa17.4■□□□□ 0.38
SMAD4-201ENST00000342988 CD83Q01151 205 aa17.4■□□□□ 0.38
SMAD4-201ENST00000342988 MLC1Q15049 377 aa17.4■□□□□ 0.38
SMAD4-201ENST00000342988 DQX1Q8TE96 717 aaKnown RBP17.4■□□□□ 0.38
SMAD4-201ENST00000342988 PDLIM2Q96JY6 352 aa17.4■□□□□ 0.38
SMAD4-201ENST00000342988 ETNK2Q9NVF9 386 aa17.4■□□□□ 0.38
SMAD4-201ENST00000342988 EGFL7Q9UHF1 273 aa17.4■□□□□ 0.38
SMAD4-201ENST00000342988 A8MX80 341 aa17.4■□□□□ 0.38
SMAD4-201ENST00000342988 AHCYP23526 432 aa17.4■□□□□ 0.38
SMAD4-201ENST00000342988 RORAP35398 523 aa17.4■□□□□ 0.38
SMAD4-201ENST00000342988 NDST1P52848 882 aa17.4■□□□□ 0.38
SMAD4-201ENST00000342988 SNTA1Q13424 505 aa17.4■□□□□ 0.38
SMAD4-201ENST00000342988 TNS4Q8IZW8 715 aa17.4■□□□□ 0.38
SMAD4-201ENST00000342988 ZNF611Q8N823 705 aa17.4■□□□□ 0.38
SMAD4-201ENST00000342988 HTATIP2Q9BUP3 242 aa17.4■□□□□ 0.38
SMAD4-201ENST00000342988 CPS1P31327 1500 aa17.4■□□□□ 0.38
SMAD4-201ENST00000342988 CYB5BO43169 146 aa17.4■□□□□ 0.38
SMAD4-201ENST00000342988 GRIK2Q13002 908 aa17.4■□□□□ 0.38
SMAD4-201ENST00000342988 ZNF676Q8N7Q3 588 aa17.4■□□□□ 0.38
SMAD4-201ENST00000342988 PROKR2Q8NFJ6 384 aa17.4■□□□□ 0.38
SMAD4-201ENST00000342988 IFT27Q9BW83 186 aa17.4■□□□□ 0.38
SMAD4-201ENST00000342988 LDAHQ9H6V9 325 aa17.4■□□□□ 0.38
SMAD4-201ENST00000342988 MRPL17Q9NRX2 175 aaKnown RBP17.4■□□□□ 0.38
SMAD4-201ENST00000342988 TGFB3P10600 412 aa17.4■□□□□ 0.38
SMAD4-201ENST00000342988 GNG2P59768 71 aa17.4■□□□□ 0.38
SMAD4-201ENST00000342988 MXD1Q05195 221 aa17.4■□□□□ 0.38
SMAD4-201ENST00000342988 DUPD1Q68J44 220 aa17.4■□□□□ 0.38
SMAD4-201ENST00000342988 C16orf86Q6ZW13 317 aa17.4■□□□□ 0.38
SMAD4-201ENST00000342988 GALNT15Q8N3T1 639 aa17.4■□□□□ 0.38
SMAD4-201ENST00000342988 CHPT1Q8WUD6 406 aa17.4■□□□□ 0.38
SMAD4-201ENST00000342988 PDE10AQ9Y233 779 aa17.4■□□□□ 0.38
SMAD4-201ENST00000342988 VTNP04004 478 aa17.4■□□□□ 0.38
SMAD4-201ENST00000342988 FGF1P05230 155 aa17.4■□□□□ 0.38
SMAD4-201ENST00000342988 BTG3Q14201 252 aaPredicted RBP17.4■□□□□ 0.38
SMAD4-201ENST00000342988 PDK4Q16654 411 aa17.4■□□□□ 0.38
SMAD4-201ENST00000342988 ZNF773Q6PK81 442 aa17.4■□□□□ 0.38
SMAD4-201ENST00000342988 ZNF410Q86VK4 478 aa17.4■□□□□ 0.38
SMAD4-201ENST00000342988 CPSF7Q8N684 471 aaKnown RBP17.4■□□□□ 0.38
SMAD4-201ENST00000342988 ZNF283Q8N7M2 679 aa17.4■□□□□ 0.38
SMAD4-201ENST00000342988 GALNT11Q8NCW6 608 aa17.4■□□□□ 0.38
SMAD4-201ENST00000342988 KCNF1Q9H3M0 494 aa17.4■□□□□ 0.38
SMAD4-201ENST00000342988 ZNRF3Q9ULT6 936 aa17.4■□□□□ 0.38
SMAD4-201ENST00000342988 USP20Q9Y2K6 914 aa17.4■□□□□ 0.38
SMAD4-201ENST00000342988 PCDHB11Q9Y5F2 797 aa17.4■□□□□ 0.38
SMAD4-201ENST00000342988 AGAP5A6NIR3 686 aa17.39■□□□□ 0.38
SMAD4-201ENST00000342988 CYP11B2P19099 503 aa17.39■□□□□ 0.38
SMAD4-201ENST00000342988 ADRA1DP25100 572 aa17.39■□□□□ 0.38
SMAD4-201ENST00000342988 AZGP1P25311 298 aaKnown RBP17.39■□□□□ 0.38
SMAD4-201ENST00000342988 HCAR3P49019 387 aa17.39■□□□□ 0.38
SMAD4-201ENST00000342988 PSEN2P49810 448 aa17.39■□□□□ 0.38
SMAD4-201ENST00000342988 RIN1Q13671 783 aa17.39■□□□□ 0.38
SMAD4-201ENST00000342988 ZNF431Q8TF32 576 aaPredicted RBP17.39■□□□□ 0.38
SMAD4-201ENST00000342988 GRIN3BO60391 1043 aa17.39■□□□□ 0.37
SMAD4-201ENST00000342988 SPTBP11277 2137 aa17.39■□□□□ 0.37
SMAD4-201ENST00000342988 MAGEA3P43357 314 aa17.39■□□□□ 0.37
SMAD4-201ENST00000342988 FAAP100Q0VG06 881 aa17.39■□□□□ 0.37
SMAD4-201ENST00000342988 ARSHQ5FYA8 562 aa17.39■□□□□ 0.37
SMAD4-201ENST00000342988 ZSCAN1Q8NBB4 408 aa17.39■□□□□ 0.37
SMAD4-201ENST00000342988 ELP5Q8TE02 316 aa17.39■□□□□ 0.37
SMAD4-201ENST00000342988 EFCAB6Q5THR3 1501 aa17.39■□□□□ 0.37
SMAD4-201ENST00000342988 GKN3PP0CG01 181 aa17.39■□□□□ 0.37
SMAD4-201ENST00000342988 ITPKAP23677 461 aa17.39■□□□□ 0.37
SMAD4-201ENST00000342988 SLC6A3Q01959 620 aa17.39■□□□□ 0.37
SMAD4-201ENST00000342988 SEC23BQ15437 767 aa17.39■□□□□ 0.37
SMAD4-201ENST00000342988 IQCCQ4KMZ1 466 aa17.39■□□□□ 0.37
SMAD4-201ENST00000342988 ZNF318Q5VUA4 2279 aa17.39■□□□□ 0.37
SMAD4-201ENST00000342988 LILRB5O75023 590 aa17.39■□□□□ 0.37
SMAD4-201ENST00000342988 RPA4Q13156 261 aa17.39■□□□□ 0.37
SMAD4-201ENST00000342988 AKR1C8PQ5T2L2 129 aa17.39■□□□□ 0.37
SMAD4-201ENST00000342988 LRRN1Q6UXK5 716 aa17.39■□□□□ 0.37
SMAD4-201ENST00000342988 TMED4Q7Z7H5 227 aa17.39■□□□□ 0.37
SMAD4-201ENST00000342988 BPIFB1Q8TDL5 484 aa17.39■□□□□ 0.37
SMAD4-201ENST00000342988 MAP4K5Q9Y4K4 846 aa17.39■□□□□ 0.37
SMAD4-201ENST00000342988 PCDHB1Q9Y5F3 818 aa17.39■□□□□ 0.37
SMAD4-201ENST00000342988 ISPDA4D126 451 aa17.39■□□□□ 0.37
SMAD4-201ENST00000342988 CLDN9O95484 217 aa17.39■□□□□ 0.37
SMAD4-201ENST00000342988 DPYSL3Q14195 570 aa17.39■□□□□ 0.37
SMAD4-201ENST00000342988 CPSF6Q16630 551 aaKnown RBP eCLIP17.39■□□□□ 0.37
SMAD4-201ENST00000342988 SCUBE3Q8IX30 993 aa17.39■□□□□ 0.37
SMAD4-201ENST00000342988 ZBED6CLQ96FA7 236 aaPredicted RBP17.39■□□□□ 0.37
SMAD4-201ENST00000342988 TCEAL7Q9BRU2 100 aa17.39■□□□□ 0.37
SMAD4-201ENST00000342988 SEMA4AQ9H3S1 761 aa17.39■□□□□ 0.37
SMAD4-201ENST00000342988 PCTPQ9UKL6 214 aa17.39■□□□□ 0.37
SMAD4-201ENST00000342988 OVOS2A0A0G2JMS6 1433 aa17.39■□□□□ 0.37
SMAD4-201ENST00000342988 OVOS2A0A0J9YW53 1432 aa17.39■□□□□ 0.37
SMAD4-201ENST00000342988 OVOS2Q6IE36 1432 aa17.39■□□□□ 0.37
SMAD4-201ENST00000342988 E7EQ34 232 aa17.39■□□□□ 0.37
SMAD4-201ENST00000342988 LAMTOR4Q0VGL1 99 aa17.39■□□□□ 0.37
SMAD4-201ENST00000342988 C1orf94Q6P1W5 598 aa17.39■□□□□ 0.37
SMAD4-201ENST00000342988 CACUL1Q86Y37 369 aa17.39■□□□□ 0.37
SMAD4-201ENST00000342988 DENND1AQ8TEH3 1009 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms