RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 FERD3LQ96RJ6 166 aa12.92□□□□□ -0.34
TUBD1-202ENST00000340993 CDC42EP4Q9H3Q1 356 aaKnown RBP12.92□□□□□ -0.34
TUBD1-202ENST00000340993 INTS10Q9NVR2 710 aaKnown RBP12.92□□□□□ -0.34
TUBD1-202ENST00000340993 KCNK4Q9NYG8 393 aa12.92□□□□□ -0.34
TUBD1-202ENST00000340993 NINJ2Q9NZG7 142 aa12.92□□□□□ -0.34
TUBD1-202ENST00000340993 MED19A0JLT2 244 aaPredicted RBP12.91□□□□□ -0.34
TUBD1-202ENST00000340993 PRR19A6NJB7 356 aa12.91□□□□□ -0.34
TUBD1-202ENST00000340993 IFRD1O00458 451 aaPredicted RBP12.91□□□□□ -0.34
TUBD1-202ENST00000340993 INSM1Q01101 510 aaPredicted RBP12.91□□□□□ -0.34
TUBD1-202ENST00000340993 DMPKQ09013 629 aa12.91□□□□□ -0.34
TUBD1-202ENST00000340993 GPR18Q14330 331 aa12.91□□□□□ -0.34
TUBD1-202ENST00000340993 ZNF460Q14592 562 aa12.91□□□□□ -0.34
TUBD1-202ENST00000340993 NAA30Q147X3 362 aaPredicted RBP12.91□□□□□ -0.34
TUBD1-202ENST00000340993 MAP9Q49MG5 647 aa12.91□□□□□ -0.34
TUBD1-202ENST00000340993 SPRED1Q7Z699 444 aa12.91□□□□□ -0.34
TUBD1-202ENST00000340993 OR5AR1Q8NGP9 310 aa12.91□□□□□ -0.34
TUBD1-202ENST00000340993 GIMAP7Q8NHV1 300 aa12.91□□□□□ -0.34
TUBD1-202ENST00000340993 NAT6Q93015 286 aa12.91□□□□□ -0.34
TUBD1-202ENST00000340993 AHCYL2Q96HN2 611 aaKnown RBP12.91□□□□□ -0.34
TUBD1-202ENST00000340993 ELMO2Q96JJ3 720 aa12.91□□□□□ -0.34
TUBD1-202ENST00000340993 GPR21Q99679 349 aa12.91□□□□□ -0.34
TUBD1-202ENST00000340993 NUDT22Q9BRQ3 303 aa12.91□□□□□ -0.34
TUBD1-202ENST00000340993 TSSK1BQ9BXA7 367 aa12.91□□□□□ -0.34
TUBD1-202ENST00000340993 OR52A5Q9H2C5 316 aa12.91□□□□□ -0.34
TUBD1-202ENST00000340993 STN1Q9H668 368 aaKnown RBP12.91□□□□□ -0.34
TUBD1-202ENST00000340993 XKR8Q9H6D3 395 aa12.91□□□□□ -0.34
TUBD1-202ENST00000340993 ANKZF1Q9H8Y5 726 aa12.91□□□□□ -0.34
TUBD1-202ENST00000340993 EVA1BQ9NVM1 165 aa12.91□□□□□ -0.34
TUBD1-202ENST00000340993 TMEM9Q9P0T7 183 aa12.91□□□□□ -0.34
TUBD1-202ENST00000340993 DNMT3AQ9Y6K1 912 aaPredicted RBP12.91□□□□□ -0.34
TUBD1-202ENST00000340993 A0A1W2PQM1 296 aa12.9□□□□□ -0.34
TUBD1-202ENST00000340993 OPA1O60313 960 aa12.9□□□□□ -0.34
TUBD1-202ENST00000340993 APOA4P06727 396 aa12.9□□□□□ -0.34
TUBD1-202ENST00000340993 MTHFD1P11586 935 aaKnown RBP12.9□□□□□ -0.34
TUBD1-202ENST00000340993 RPS3P23396 243 aaKnown RBP eCLIP12.9□□□□□ -0.34
TUBD1-202ENST00000340993 MCM3P25205 808 aa12.9□□□□□ -0.34
TUBD1-202ENST00000340993 AOAHP28039 575 aa12.9□□□□□ -0.34
TUBD1-202ENST00000340993 CD151P48509 253 aa12.9□□□□□ -0.34
TUBD1-202ENST00000340993 CDKN2DP55273 166 aa12.9□□□□□ -0.34
TUBD1-202ENST00000340993 UBE2IP63279 158 aaKnown RBP12.9□□□□□ -0.34
TUBD1-202ENST00000340993 TMED2Q15363 201 aa12.9□□□□□ -0.34
TUBD1-202ENST00000340993 KBTBD12Q3ZCT8 623 aa12.9□□□□□ -0.34
TUBD1-202ENST00000340993 ZNF658BQ4V348 819 aaPredicted RBP12.9□□□□□ -0.34
TUBD1-202ENST00000340993 ACSBG2Q5FVE4 666 aa12.9□□□□□ -0.34
TUBD1-202ENST00000340993 ZNF449Q6P9G9 518 aa12.9□□□□□ -0.34
TUBD1-202ENST00000340993 FOXR1Q6PIV2 292 aa12.9□□□□□ -0.34
TUBD1-202ENST00000340993 TMPRSS9Q7Z410 1059 aa12.9□□□□□ -0.34
TUBD1-202ENST00000340993 GLRX5Q86SX6 157 aa12.9□□□□□ -0.34
TUBD1-202ENST00000340993 OR10G6Q8NH81 332 aa12.9□□□□□ -0.34
TUBD1-202ENST00000340993 NCSTNQ92542 709 aa12.9□□□□□ -0.34
TUBD1-202ENST00000340993 RNF31Q96EP0 1072 aa12.9□□□□□ -0.34
TUBD1-202ENST00000340993 PANX3Q96QZ0 392 aa12.9□□□□□ -0.34
TUBD1-202ENST00000340993 TCF12Q99081 682 aa12.9□□□□□ -0.34
TUBD1-202ENST00000340993 UNKQ9C0B0 810 aaKnown RBP12.9□□□□□ -0.34
TUBD1-202ENST00000340993 NCKIPSDQ9NZQ3 722 aa12.9□□□□□ -0.34
TUBD1-202ENST00000340993 KLK13Q9UKR3 277 aa12.9□□□□□ -0.34
TUBD1-202ENST00000340993 ACSL5Q9ULC5 683 aa12.9□□□□□ -0.34
TUBD1-202ENST00000340993 ASF1AQ9Y294 204 aa12.9□□□□□ -0.34
TUBD1-202ENST00000340993 NFS1Q9Y697 457 aa12.9□□□□□ -0.34
TUBD1-202ENST00000340993 SNRNP200O75643 2136 aaKnown RBP12.9□□□□□ -0.34
TUBD1-202ENST00000340993 KIR2DS5A0A0G2JLQ3 304 aa12.89□□□□□ -0.35
TUBD1-202ENST00000340993 A0A0G2JNG1 304 aa12.89□□□□□ -0.35
TUBD1-202ENST00000340993 SLC5A10A0PJK1 596 aa12.89□□□□□ -0.35
TUBD1-202ENST00000340993 KIR2DS3K7RE56 304 aa12.89□□□□□ -0.35
TUBD1-202ENST00000340993 QSOX1O00391 747 aa12.89□□□□□ -0.35
TUBD1-202ENST00000340993 B4GAT1O43505 415 aa12.89□□□□□ -0.35
TUBD1-202ENST00000340993 NUDT21O43809 227 aaKnown RBP12.89□□□□□ -0.35
TUBD1-202ENST00000340993 ESR1P03372 595 aa12.89□□□□□ -0.35
TUBD1-202ENST00000340993 SLC2A4P14672 509 aa12.89□□□□□ -0.35
TUBD1-202ENST00000340993 BDKRB1P46663 353 aa12.89□□□□□ -0.35
TUBD1-202ENST00000340993 LEPRP48357 1165 aaKnown RBP12.89□□□□□ -0.35
TUBD1-202ENST00000340993 SPIDRQ14159 915 aa12.89□□□□□ -0.35
TUBD1-202ENST00000340993 KIR2DS5Q14953 304 aa12.89□□□□□ -0.35
TUBD1-202ENST00000340993 ERCC6LQ2NKX8 1250 aa12.89□□□□□ -0.35
TUBD1-202ENST00000340993 ABRAXAS1Q6UWZ7 409 aa12.89□□□□□ -0.35
TUBD1-202ENST00000340993 B3GNT8Q7Z7M8 397 aa12.89□□□□□ -0.35
TUBD1-202ENST00000340993 TAX1BP1Q86VP1 789 aa12.89□□□□□ -0.35
TUBD1-202ENST00000340993 CPNE9Q8IYJ1 553 aa12.89□□□□□ -0.35
TUBD1-202ENST00000340993 C2orf73Q8N5S3 287 aaPredicted RBP12.89□□□□□ -0.35
TUBD1-202ENST00000340993 RCBTB1Q8NDN9 531 aa12.89□□□□□ -0.35
TUBD1-202ENST00000340993 ZBTB9Q96C00 473 aa12.89□□□□□ -0.35
TUBD1-202ENST00000340993 GFM1Q96RP9 751 aaKnown RBP12.89□□□□□ -0.35
TUBD1-202ENST00000340993 AARSD1Q9BTE6 412 aaKnown RBP12.89□□□□□ -0.35
TUBD1-202ENST00000340993 LRRN3Q9H3W5 708 aa12.89□□□□□ -0.35
TUBD1-202ENST00000340993 CAB39LQ9H9S4 337 aa12.89□□□□□ -0.35
TUBD1-202ENST00000340993 MOCS1Q9NZB8 636 aa12.89□□□□□ -0.35
TUBD1-202ENST00000340993 TXNDC16Q9P2K2 825 aa12.89□□□□□ -0.35
TUBD1-202ENST00000340993 VPS9D1Q9Y2B5 631 aa12.89□□□□□ -0.35
TUBD1-202ENST00000340993 MED16Q9Y2X0 877 aa12.89□□□□□ -0.35
TUBD1-202ENST00000340993 PCDHB1Q9Y5F3 818 aa12.89□□□□□ -0.35
TUBD1-202ENST00000340993 CHD8Q9HCK8 2581 aa12.89□□□□□ -0.35
TUBD1-202ENST00000340993 C17orf113A0A1B0GUU1 675 aa12.89□□□□□ -0.35
TUBD1-202ENST00000340993 A8MU76 341 aa12.89□□□□□ -0.35
TUBD1-202ENST00000340993 LIN7AO14910 233 aaPredicted RBP12.89□□□□□ -0.35
TUBD1-202ENST00000340993 JUPP14923 745 aa12.89□□□□□ -0.35
TUBD1-202ENST00000340993 AMD1P17707 334 aa12.89□□□□□ -0.35
TUBD1-202ENST00000340993 CSF2RBP32927 897 aa12.89□□□□□ -0.35
TUBD1-202ENST00000340993 GMPRP36959 345 aa12.89□□□□□ -0.35
TUBD1-202ENST00000340993 PPP1CAP62136 330 aa12.89□□□□□ -0.35
TUBD1-202ENST00000340993 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms