RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 FERD3LQ96RJ6 166 aa18.74■□□□□ 0.59
SYNE4-202ENST00000340477 CARD6Q9BX69 1037 aa18.74■□□□□ 0.59
SYNE4-202ENST00000340477 OR52A5Q9H2C5 316 aa18.74■□□□□ 0.59
SYNE4-202ENST00000340477 KLHL3Q9UH77 587 aa18.74■□□□□ 0.59
SYNE4-202ENST00000340477 MN1Q10571 1320 aaPredicted RBP18.74■□□□□ 0.59
SYNE4-202ENST00000340477 FAM187AA6NFU0 413 aa18.73■□□□□ 0.59
SYNE4-202ENST00000340477 AGRPO00253 132 aa18.73■□□□□ 0.59
SYNE4-202ENST00000340477 KPNA5O15131 536 aa18.73■□□□□ 0.59
SYNE4-202ENST00000340477 KDM1AO60341 852 aa18.73■□□□□ 0.59
SYNE4-202ENST00000340477 SEC31AO94979 1220 aaKnown RBP18.73■□□□□ 0.59
SYNE4-202ENST00000340477 RPS3P23396 243 aaKnown RBP eCLIP18.73■□□□□ 0.59
SYNE4-202ENST00000340477 ARNTP27540 789 aa18.73■□□□□ 0.59
SYNE4-202ENST00000340477 ARL4CP56559 192 aa18.73■□□□□ 0.59
SYNE4-202ENST00000340477 C2orf54Q08AI8 447 aa18.73■□□□□ 0.59
SYNE4-202ENST00000340477 CALCOCO2Q13137 446 aa18.73■□□□□ 0.59
SYNE4-202ENST00000340477 C16orf72Q14CZ0 275 aa18.73■□□□□ 0.59
SYNE4-202ENST00000340477 BRD3Q15059 726 aa18.73■□□□□ 0.59
SYNE4-202ENST00000340477 HIF1AQ16665 826 aa18.73■□□□□ 0.59
SYNE4-202ENST00000340477 TYSND1Q2T9J0 566 aa18.73■□□□□ 0.59
SYNE4-202ENST00000340477 BBS9Q3SYG4 887 aa18.73■□□□□ 0.59
SYNE4-202ENST00000340477 ZNF470Q6ECI4 717 aa18.73■□□□□ 0.59
SYNE4-202ENST00000340477 IRGCQ6NXR0 463 aa18.73■□□□□ 0.59
SYNE4-202ENST00000340477 DUS1LQ6P1R4 473 aaKnown RBP18.73■□□□□ 0.59
SYNE4-202ENST00000340477 ZNF574Q6ZN55 896 aaPredicted RBP18.73■□□□□ 0.59
SYNE4-202ENST00000340477 LRRC69Q6ZNQ3 347 aa18.73■□□□□ 0.59
SYNE4-202ENST00000340477 OOSP2Q86WS3 158 aa18.73■□□□□ 0.59
SYNE4-202ENST00000340477 ASZ1Q8WWH4 475 aa18.73■□□□□ 0.59
SYNE4-202ENST00000340477 ZNF592Q92610 1267 aa18.73■□□□□ 0.59
SYNE4-202ENST00000340477 SIGLEC10Q96LC7 697 aa18.73■□□□□ 0.59
SYNE4-202ENST00000340477 SLC46A1Q96NT5 459 aa18.73■□□□□ 0.59
SYNE4-202ENST00000340477 FAM167BQ9BTA0 163 aa18.73■□□□□ 0.59
SYNE4-202ENST00000340477 KIR3DX1Q9H7L2 352 aa18.73■□□□□ 0.59
SYNE4-202ENST00000340477 MVB12BQ9H7P6 319 aa18.73■□□□□ 0.59
SYNE4-202ENST00000340477 C20orf96Q9NUD7 363 aaPredicted RBP18.73■□□□□ 0.59
SYNE4-202ENST00000340477 INTS10Q9NVR2 710 aaKnown RBP18.73■□□□□ 0.59
SYNE4-202ENST00000340477 TMEM9Q9P0T7 183 aa18.73■□□□□ 0.59
SYNE4-202ENST00000340477 RAXQ9Y2V3 346 aa18.73■□□□□ 0.59
SYNE4-202ENST00000340477 APC2O95996 2303 aa18.72■□□□□ 0.59
SYNE4-202ENST00000340477 EPG5Q9HCE0 2579 aa18.72■□□□□ 0.59
SYNE4-202ENST00000340477 PRAMEF33A0A0G2JMD5 474 aa18.72■□□□□ 0.59
SYNE4-202ENST00000340477 RASSF9O75901 435 aa18.72■□□□□ 0.59
SYNE4-202ENST00000340477 URI1O94763 535 aaPredicted RBP18.72■□□□□ 0.59
SYNE4-202ENST00000340477 CAPNS1P04632 268 aa18.72■□□□□ 0.59
SYNE4-202ENST00000340477 HGFP14210 728 aa18.72■□□□□ 0.59
SYNE4-202ENST00000340477 ITGB6P18564 788 aa18.72■□□□□ 0.59
SYNE4-202ENST00000340477 ARCN1P48444 511 aaKnown RBP18.72■□□□□ 0.59
SYNE4-202ENST00000340477 ITGA8P53708 1063 aa18.72■□□□□ 0.59
SYNE4-202ENST00000340477 MAPK10P53779 464 aa18.72■□□□□ 0.59
SYNE4-202ENST00000340477 CFHR1Q03591 330 aa18.72■□□□□ 0.59
SYNE4-202ENST00000340477 DHX9Q08211 1270 aaKnown RBP18.72■□□□□ 0.59
SYNE4-202ENST00000340477 PRKAA1Q13131 559 aa18.72■□□□□ 0.59
SYNE4-202ENST00000340477 CILP2Q8IUL8 1156 aa18.72■□□□□ 0.59
SYNE4-202ENST00000340477 ACVR1CQ8NER5 493 aa18.72■□□□□ 0.59
SYNE4-202ENST00000340477 SNIP1Q8TAD8 396 aaKnown RBP18.72■□□□□ 0.59
SYNE4-202ENST00000340477 RSC1A1Q92681 617 aa18.72■□□□□ 0.59
SYNE4-202ENST00000340477 TFGQ92734 400 aaPredicted RBP18.72■□□□□ 0.59
SYNE4-202ENST00000340477 DCBLD2Q96PD2 775 aa18.72■□□□□ 0.59
SYNE4-202ENST00000340477 TGM7Q96PF1 710 aa18.72■□□□□ 0.59
SYNE4-202ENST00000340477 CCDC68Q9H2F9 335 aa18.72■□□□□ 0.59
SYNE4-202ENST00000340477 TRIT1Q9H3H1 467 aaKnown RBP18.72■□□□□ 0.59
SYNE4-202ENST00000340477 SLC24A2Q9UI40 661 aa18.72■□□□□ 0.59
SYNE4-202ENST00000340477 ASF1AQ9Y294 204 aa18.72■□□□□ 0.59
SYNE4-202ENST00000340477 A8MU76 341 aa18.71■□□□□ 0.59
SYNE4-202ENST00000340477 TOX3O15405 576 aaPredicted RBP18.71■□□□□ 0.59
SYNE4-202ENST00000340477 CAPN5O15484 640 aaPredicted RBP18.71■□□□□ 0.59
SYNE4-202ENST00000340477 ESR1P03372 595 aa18.71■□□□□ 0.59
SYNE4-202ENST00000340477 RPN2P04844 631 aa18.71■□□□□ 0.59
SYNE4-202ENST00000340477 IVDP26440 423 aa18.71■□□□□ 0.59
SYNE4-202ENST00000340477 PDHA2P29803 388 aa18.71■□□□□ 0.59
SYNE4-202ENST00000340477 CSE1LP55060 971 aaKnown RBP18.71■□□□□ 0.59
SYNE4-202ENST00000340477 HSPA14Q0VDF9 509 aa18.71■□□□□ 0.59
SYNE4-202ENST00000340477 CRYMQ14894 314 aa18.71■□□□□ 0.59
SYNE4-202ENST00000340477 ZNF658BQ4V348 819 aaPredicted RBP18.71■□□□□ 0.59
SYNE4-202ENST00000340477 SPANXN3Q5MJ09 141 aa18.71■□□□□ 0.59
SYNE4-202ENST00000340477 HIBCHQ6NVY1 386 aaPredicted RBP18.71■□□□□ 0.59
SYNE4-202ENST00000340477 OTOAQ7RTW8 1153 aa18.71■□□□□ 0.59
SYNE4-202ENST00000340477 FAM129CQ86XR2 697 aa18.71■□□□□ 0.59
SYNE4-202ENST00000340477 ZNF248Q8NDW4 579 aa18.71■□□□□ 0.59
SYNE4-202ENST00000340477 LCN9Q8WX39 176 aa18.71■□□□□ 0.59
SYNE4-202ENST00000340477 LPGAT1Q92604 370 aa18.71■□□□□ 0.59
SYNE4-202ENST00000340477 LRRC39Q96DD0 335 aa18.71■□□□□ 0.59
SYNE4-202ENST00000340477 FCRL3Q96P31 734 aaPredicted RBP18.71■□□□□ 0.59
SYNE4-202ENST00000340477 EBNA1BP2Q99848 306 aaKnown RBP18.71■□□□□ 0.59
SYNE4-202ENST00000340477 TRIM56Q9BRZ2 755 aaKnown RBP18.71■□□□□ 0.59
SYNE4-202ENST00000340477 RAB33BQ9H082 229 aa18.71■□□□□ 0.59
SYNE4-202ENST00000340477 RAB17Q9H0T7 212 aa18.71■□□□□ 0.59
SYNE4-202ENST00000340477 P2RY12Q9H244 342 aa18.71■□□□□ 0.59
SYNE4-202ENST00000340477 ASCL3Q9NQ33 180 aa18.71■□□□□ 0.59
SYNE4-202ENST00000340477 OGFRQ9NZT2 677 aa18.71■□□□□ 0.59
SYNE4-202ENST00000340477 PDP2Q9P2J9 529 aa18.71■□□□□ 0.59
SYNE4-202ENST00000340477 CDC23Q9UJX2 597 aa18.71■□□□□ 0.59
SYNE4-202ENST00000340477 UTP11Q9Y3A2 253 aaKnown RBP18.71■□□□□ 0.59
SYNE4-202ENST00000340477 USP24Q9UPU5 2620 aa18.71■□□□□ 0.59
SYNE4-202ENST00000340477 ANKRD11Q6UB99 2663 aaPredicted RBP18.71■□□□□ 0.59
SYNE4-202ENST00000340477 ZCWPW2A0A1B0GU75 182 aa18.7■□□□□ 0.58
SYNE4-202ENST00000340477 A0A1W2PNU3 283 aaPredicted RBP18.7■□□□□ 0.58
SYNE4-202ENST00000340477 SLC5A10A0PJK1 596 aa18.7■□□□□ 0.58
SYNE4-202ENST00000340477 SRRM3A6NNA2 597 aaPredicted RBP18.7■□□□□ 0.58
SYNE4-202ENST00000340477 E5RI56 91 aa18.7■□□□□ 0.58
SYNE4-202ENST00000340477 MATN2O00339 956 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms