RNA–Protein interactions for RNA: ENST00000339901.8

SECISBP2-201, Transcript of SECIS binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SECISBP2, Length 3,320 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SECISBP2-201ENST00000339901 AP1S1P61966 158 aa13.21□□□□□ -0.3
SECISBP2-201ENST00000339901 C16orf59Q7L2K0 433 aa13.21□□□□□ -0.3
SECISBP2-201ENST00000339901 NPAS4Q8IUM7 802 aa13.21□□□□□ -0.3
SECISBP2-201ENST00000339901 RBFAQ8N0V3 343 aa13.21□□□□□ -0.3
SECISBP2-201ENST00000339901 DNAJB8Q8NHS0 232 aa13.21□□□□□ -0.3
SECISBP2-201ENST00000339901 POP5Q969H6 163 aaKnown RBP13.21□□□□□ -0.3
SECISBP2-201ENST00000339901 PPP1R14BQ96C90 147 aa13.21□□□□□ -0.3
SECISBP2-201ENST00000339901 FEM1AQ9BSK4 669 aa13.21□□□□□ -0.3
SECISBP2-201ENST00000339901 FAM126AQ9BYI3 521 aaPredicted RBP13.21□□□□□ -0.3
SECISBP2-201ENST00000339901 CD244Q9BZW8 370 aa13.21□□□□□ -0.3
SECISBP2-201ENST00000339901 SARS2Q9NP81 518 aaKnown RBP13.21□□□□□ -0.3
SECISBP2-201ENST00000339901 GALNT8Q9NY28 637 aa13.21□□□□□ -0.3
SECISBP2-201ENST00000339901 VAPAQ9P0L0 249 aa13.21□□□□□ -0.3
SECISBP2-201ENST00000339901 IFT80Q9P2H3 777 aaPredicted RBP13.21□□□□□ -0.3
SECISBP2-201ENST00000339901 TRBV5-3A0A0A0MS03 114 aa13.2□□□□□ -0.3
SECISBP2-201ENST00000339901 GPR39O43194 453 aa13.2□□□□□ -0.3
SECISBP2-201ENST00000339901 HOXA2O43364 376 aa13.2□□□□□ -0.3
SECISBP2-201ENST00000339901 IL6P05231 212 aa13.2□□□□□ -0.3
SECISBP2-201ENST00000339901 IL1RNP18510 177 aa13.2□□□□□ -0.3
SECISBP2-201ENST00000339901 DGKQP52824 942 aa13.2□□□□□ -0.3
SECISBP2-201ENST00000339901 RBM48Q5RL73 367 aaKnown RBP13.2□□□□□ -0.3
SECISBP2-201ENST00000339901 GPRC6AQ5T6X5 926 aa13.2□□□□□ -0.3
SECISBP2-201ENST00000339901 SULT1C3Q6IMI6 304 aa13.2□□□□□ -0.3
SECISBP2-201ENST00000339901 LINGO4Q6UY18 593 aa13.2□□□□□ -0.3
SECISBP2-201ENST00000339901 MACC1Q6ZN28 852 aa13.2□□□□□ -0.3
SECISBP2-201ENST00000339901 SNX20Q7Z614 316 aa13.2□□□□□ -0.3
SECISBP2-201ENST00000339901 NECAB2Q7Z6G3 386 aa13.2□□□□□ -0.3
SECISBP2-201ENST00000339901 SERPINA9Q86WD7 417 aa13.2□□□□□ -0.3
SECISBP2-201ENST00000339901 CIPCQ9C0C6 399 aa13.2□□□□□ -0.3
SECISBP2-201ENST00000339901 CLPBQ9H078 707 aa13.2□□□□□ -0.3
SECISBP2-201ENST00000339901 NSUN3Q9H649 340 aaKnown RBP13.2□□□□□ -0.3
SECISBP2-201ENST00000339901 CLMPQ9H6B4 373 aa13.2□□□□□ -0.3
SECISBP2-201ENST00000339901 A0A0U1RQS6 177 aa13.2□□□□□ -0.3
SECISBP2-201ENST00000339901 THRBP10828 461 aa13.2□□□□□ -0.3
SECISBP2-201ENST00000339901 TCF3P15923 654 aa13.2□□□□□ -0.3
SECISBP2-201ENST00000339901 HOXB6P17509 224 aaKnown RBP13.2□□□□□ -0.3
SECISBP2-201ENST00000339901 DGKAP23743 735 aa13.2□□□□□ -0.3
SECISBP2-201ENST00000339901 CA5AP35218 305 aa13.2□□□□□ -0.3
SECISBP2-201ENST00000339901 RGS4P49798 205 aa13.2□□□□□ -0.3
SECISBP2-201ENST00000339901 TUBA3CQ13748 450 aa13.2□□□□□ -0.3
SECISBP2-201ENST00000339901 MYBPC3Q14896 1274 aa13.2□□□□□ -0.3
SECISBP2-201ENST00000339901 AAK1Q2M2I8 961 aa13.2□□□□□ -0.3
SECISBP2-201ENST00000339901 ELMSAN1Q6PJG2 1045 aa13.2□□□□□ -0.3
SECISBP2-201ENST00000339901 MSRB3Q8IXL7 192 aa13.2□□□□□ -0.3
SECISBP2-201ENST00000339901 USP7Q93009 1102 aa13.2□□□□□ -0.3
SECISBP2-201ENST00000339901 RHBDF1Q96CC6 855 aa13.2□□□□□ -0.3
SECISBP2-201ENST00000339901 CCDC97Q96F63 343 aaPredicted RBP13.2□□□□□ -0.3
SECISBP2-201ENST00000339901 MYO19Q96H55 970 aa13.2□□□□□ -0.3
SECISBP2-201ENST00000339901 MUS81Q96NY9 551 aa13.2□□□□□ -0.3
SECISBP2-201ENST00000339901 POLR1BQ9H9Y6 1135 aa13.2□□□□□ -0.3
SECISBP2-201ENST00000339901 CARS2Q9HA77 564 aaKnown RBP13.2□□□□□ -0.3
SECISBP2-201ENST00000339901 TRPM5Q9NZQ8 1165 aa13.2□□□□□ -0.3
SECISBP2-201ENST00000339901 DNAJB9Q9UBS3 223 aa13.2□□□□□ -0.3
SECISBP2-201ENST00000339901 EIF3LQ9Y262 564 aaKnown RBP13.2□□□□□ -0.3
SECISBP2-201ENST00000339901 PCDHB9Q9Y5E1 797 aa13.2□□□□□ -0.3
SECISBP2-201ENST00000339901 COL4A6Q14031 1691 aa13.2□□□□□ -0.3
SECISBP2-201ENST00000339901 TSPAN3O60637 253 aa13.19□□□□□ -0.3
SECISBP2-201ENST00000339901 SEC14L2O76054 403 aa13.19□□□□□ -0.3
SECISBP2-201ENST00000339901 MT-ND1P03886 318 aa13.19□□□□□ -0.3
SECISBP2-201ENST00000339901 EBLN1P0CF75 366 aa13.19□□□□□ -0.3
SECISBP2-201ENST00000339901 MBL2P11226 248 aaPredicted RBP13.19□□□□□ -0.3
SECISBP2-201ENST00000339901 MZF1P28698 734 aaPredicted RBP13.19□□□□□ -0.3
SECISBP2-201ENST00000339901 HMOX2P30519 316 aa13.19□□□□□ -0.3
SECISBP2-201ENST00000339901 PPP3CCP48454 512 aa13.19□□□□□ -0.3
SECISBP2-201ENST00000339901 NRIP1P48552 1158 aa13.19□□□□□ -0.3
SECISBP2-201ENST00000339901 CSNK1DP48730 415 aa13.19□□□□□ -0.3
SECISBP2-201ENST00000339901 CHRNB3Q05901 458 aa13.19□□□□□ -0.3
SECISBP2-201ENST00000339901 EPS8Q12929 822 aa13.19□□□□□ -0.3
SECISBP2-201ENST00000339901 NFATC2Q13469 925 aa13.19□□□□□ -0.3
SECISBP2-201ENST00000339901 RUNDC3AQ59EK9 446 aa13.19□□□□□ -0.3
SECISBP2-201ENST00000339901 TTC23LQ6PF05 361 aa13.19□□□□□ -0.3
SECISBP2-201ENST00000339901 ITIH5Q86UX2 942 aa13.19□□□□□ -0.3
SECISBP2-201ENST00000339901 SVOPLQ8N434 492 aa13.19□□□□□ -0.3
SECISBP2-201ENST00000339901 FNDC8Q8TC99 324 aa13.19□□□□□ -0.3
SECISBP2-201ENST00000339901 LKAAEAR1Q8TD35 194 aa13.19□□□□□ -0.3
SECISBP2-201ENST00000339901 SLC22A17Q8WUG5 538 aa13.19□□□□□ -0.3
SECISBP2-201ENST00000339901 GPR63Q9BZJ6 419 aa13.19□□□□□ -0.3
SECISBP2-201ENST00000339901 AFF4Q9UHB7 1163 aaKnown RBP13.19□□□□□ -0.3
SECISBP2-201ENST00000339901 PLXNB3Q9ULL4 1909 aa13.19□□□□□ -0.3
SECISBP2-201ENST00000339901 OBSL1O75147 1896 aa13.19□□□□□ -0.3
SECISBP2-201ENST00000339901 A0A1W2PQ45 241 aaPredicted RBP13.19□□□□□ -0.3
SECISBP2-201ENST00000339901 A0A1W2PQY0 241 aa13.19□□□□□ -0.3
SECISBP2-201ENST00000339901 SH3PXD2BA1X283 911 aa13.19□□□□□ -0.3
SECISBP2-201ENST00000339901 DFNA5O60443 496 aa13.19□□□□□ -0.3
SECISBP2-201ENST00000339901 GREM1O60565 184 aa13.19□□□□□ -0.3
SECISBP2-201ENST00000339901 SEC24AO95486 1093 aa13.19□□□□□ -0.3
SECISBP2-201ENST00000339901 ACRV1P26436 265 aa13.19□□□□□ -0.3
SECISBP2-201ENST00000339901 SHMT2P34897 504 aa13.19□□□□□ -0.3
SECISBP2-201ENST00000339901 POLR2IP36954 125 aaKnown RBP13.19□□□□□ -0.3
SECISBP2-201ENST00000339901 STT3AP46977 705 aa13.19□□□□□ -0.3
SECISBP2-201ENST00000339901 HNRNPFP52597 415 aaKnown RBP13.19□□□□□ -0.3
SECISBP2-201ENST00000339901 TMBIM6P55061 237 aa13.19□□□□□ -0.3
SECISBP2-201ENST00000339901 RHOAP61586 193 aa13.19□□□□□ -0.3
SECISBP2-201ENST00000339901 CDKL4Q5MAI5 379 aa13.19□□□□□ -0.3
SECISBP2-201ENST00000339901 ARMC12Q5T9G4 340 aa13.19□□□□□ -0.3
SECISBP2-201ENST00000339901 PTRHD1Q6GMV3 140 aaKnown RBP13.19□□□□□ -0.3
SECISBP2-201ENST00000339901 TMEM214Q6NUQ4 689 aaKnown RBP13.19□□□□□ -0.3
SECISBP2-201ENST00000339901 KLHL35Q6PF15 583 aa13.19□□□□□ -0.3
SECISBP2-201ENST00000339901 OR2T12Q8NG77 320 aa13.19□□□□□ -0.3
SECISBP2-201ENST00000339901 ZBTB18Q99592 522 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms