RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 ACAT2Q9BWD1 397 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 CEP41Q9BYV8 373 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 TRIM8Q9BZR9 551 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 MMP27Q9H306 513 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 TOR3AQ9H497 397 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 NGRNQ9NPE2 291 aaKnown RBP5.51□□□□□ -1.53
CSDE1-202ENST00000339438 HPS4Q9NQG7 708 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 GIMAP4Q9NUV9 329 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 TMEM39AQ9NV64 488 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 TBX20Q9UMR3 447 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 MAGED2Q9UNF1 606 aaPredicted RBP5.51□□□□□ -1.53
CSDE1-202ENST00000339438 AURKCQ9UQB9 309 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 CLDN24A6NM45 220 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 TOR1AO14656 332 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 PDPK1O15530 556 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 KCNN4O15554 427 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 AKR7A2O43488 359 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 RECQL4O94761 1208 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 KRT7P08729 469 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 CSF2RAP15509 400 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 CHRM3P20309 590 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 EEF1B2P24534 225 aaKnown RBP5.51□□□□□ -1.53
CSDE1-202ENST00000339438 MIPP30301 263 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 LRPAP1P30533 357 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 GRK5P34947 590 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 MAP2K4P45985 399 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 NPTX2P47972 431 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 LIMK2P53671 638 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 STX5Q13190 355 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 EMC2Q15006 297 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 TBRG1Q3YBR2 411 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 PTPN20Q4JDL3 420 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 ZNF691Q5VV52 312 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 IER5Q5VY09 327 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 DBX2Q6ZNG2 339 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 LARP4Q71RC2 724 aaKnown RBP eCLIP5.51□□□□□ -1.532e-8■■■□□ 15.4
CSDE1-202ENST00000339438 PLPP6Q8IY26 295 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 RNF149Q8NC42 400 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 OR52H1Q8NGJ2 320 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 AURKBQ96GD4 344 aaPredicted RBP5.51□□□□□ -1.53
CSDE1-202ENST00000339438 KLHL15Q96M94 604 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 NODALQ96S42 347 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 CARS2Q9HA77 564 aaKnown RBP5.51□□□□□ -1.53
CSDE1-202ENST00000339438 NMRAL1Q9HBL8 299 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 RPRD1BQ9NQG5 326 aaKnown RBP5.51□□□□□ -1.53
CSDE1-202ENST00000339438 STAP1Q9ULZ2 295 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 NEUROG3Q9Y4Z2 214 aa5.51□□□□□ -1.53
CSDE1-202ENST00000339438 ITPR1Q14643 2758 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 CCDC154A6NI56 674 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 ZNF487B1APH4 448 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 SLCO1B7G3V0H7 640 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 MRASO14807 208 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 DLX3O60479 287 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 GREM1O60565 184 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 OR7A10O76100 309 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 LSM8O95777 96 aaKnown RBP5.5□□□□□ -1.53
CSDE1-202ENST00000339438 HLA-DRAP01903 254 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 ALBP02768 609 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 CALB1P05937 261 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 SNRPB2P08579 225 aaKnown RBP5.5□□□□□ -1.53
CSDE1-202ENST00000339438 ZNF45Q02386 682 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 FAPQ12884 760 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 CAPSQ13938 189 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 SQLEQ14534 574 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 CLCA4Q14CN2 919 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 ZNF404Q494X3 552 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 GRTP1Q5TC63 336 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 ANKS3Q6ZW76 656 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 TMEM173Q86WV6 379 aaPredicted RBP5.5□□□□□ -1.53
CSDE1-202ENST00000339438 CCDC103Q8IW40 242 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 TCTE3Q8IZS6 198 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 PCSK9Q8NBP7 692 aaKnown RBP5.5□□□□□ -1.53
CSDE1-202ENST00000339438 PROX1Q92786 737 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 ISG20Q96AZ6 181 aaKnown RBP5.5□□□□□ -1.53
CSDE1-202ENST00000339438 RNF157Q96PX1 679 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 GAD1Q99259 594 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 SETD4Q9NVD3 440 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 MIOSQ9NXC5 875 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 TAS2R9Q9NYW1 312 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 GLTPQ9NZD2 209 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 CCDC167Q9P0B6 97 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.5□□□□□ -1.53
CSDE1-202ENST00000339438 TRAPPC4Q9Y296 219 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 PCDHGB6Q9Y5F9 930 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 ZCWPW2A0A1B0GU75 182 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 LINC01553A4QN01 128 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 PDZK1P1A8MUH7 402 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 FAM25EA8MYX2 175 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 FAM25AB3EWG3 89 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 FAM25CB3EWG5 89 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 FAM25GB3EWG6 89 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 H3BMM5 538 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 PDGFAP04085 211 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 C2P06681 752 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 ERVK-10P10266 1014 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 IL7P13232 177 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 CAPN3P20807 821 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 TGM2P21980 687 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 IL12AP29459 219 aa5.5□□□□□ -1.53
CSDE1-202ENST00000339438 TYK2P29597 1187 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms