RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 ATP6V1G1O75348 118 aa12.68□□□□□ -0.38
HMGCS1-201ENST00000325110 PRAMEF12O95522 483 aa12.68□□□□□ -0.38
HMGCS1-201ENST00000325110 CPSF4O95639 269 aaKnown RBP12.68□□□□□ -0.38
HMGCS1-201ENST00000325110 ITGALP20701 1170 aa12.68□□□□□ -0.38
HMGCS1-201ENST00000325110 AGXTP21549 392 aa12.68□□□□□ -0.38
HMGCS1-201ENST00000325110 MATN1P21941 496 aa12.68□□□□□ -0.38
HMGCS1-201ENST00000325110 MZF1P28698 734 aaPredicted RBP12.68□□□□□ -0.38
HMGCS1-201ENST00000325110 CYP4F3Q08477 520 aa12.68□□□□□ -0.38
HMGCS1-201ENST00000325110 EIF4EBP2Q13542 120 aaPredicted RBP12.68□□□□□ -0.38
HMGCS1-201ENST00000325110 CTSL3PQ5NE16 218 aa12.68□□□□□ -0.38
HMGCS1-201ENST00000325110 HECTD3Q5T447 861 aa12.68□□□□□ -0.38
HMGCS1-201ENST00000325110 SULT1C3Q6IMI6 304 aa12.68□□□□□ -0.38
HMGCS1-201ENST00000325110 ZFAND4Q86XD8 727 aa12.68□□□□□ -0.38
HMGCS1-201ENST00000325110 CROCCP3Q8IVE0 287 aa12.68□□□□□ -0.38
HMGCS1-201ENST00000325110 EID3Q8N140 333 aa12.68□□□□□ -0.38
HMGCS1-201ENST00000325110 SCML4Q8N228 414 aa12.68□□□□□ -0.38
HMGCS1-201ENST00000325110 SELENOMQ8WWX9 145 aa12.68□□□□□ -0.38
HMGCS1-201ENST00000325110 TNKS2Q9H2K2 1166 aa12.68□□□□□ -0.38
HMGCS1-201ENST00000325110 ELOVL6Q9H5J4 265 aa12.68□□□□□ -0.38
HMGCS1-201ENST00000325110 HPS4Q9NQG7 708 aa12.68□□□□□ -0.38
HMGCS1-201ENST00000325110 ZIM2Q9NZV7 527 aa12.68□□□□□ -0.38
HMGCS1-201ENST00000325110 FNIP2Q9P278 1114 aa12.68□□□□□ -0.38
HMGCS1-201ENST00000325110 LOC285556D6RIA3 1793 aa12.68□□□□□ -0.38
HMGCS1-201ENST00000325110 PDCD11Q14690 1871 aaKnown RBP12.67□□□□□ -0.38
HMGCS1-201ENST00000325110 ELOVL7A1L3X0 281 aa12.67□□□□□ -0.38
HMGCS1-201ENST00000325110 SLC38A8A6NNN8 435 aa12.67□□□□□ -0.38
HMGCS1-201ENST00000325110 CFAP99D6REC4 459 aa12.67□□□□□ -0.38
HMGCS1-201ENST00000325110 E2F3O00716 465 aa12.67□□□□□ -0.38
HMGCS1-201ENST00000325110 TTKP33981 857 aa12.67□□□□□ -0.38
HMGCS1-201ENST00000325110 EMP3P54852 163 aa12.67□□□□□ -0.38
HMGCS1-201ENST00000325110 PRKCZQ05513 592 aa12.67□□□□□ -0.38
HMGCS1-201ENST00000325110 FOXM1Q08050 763 aa12.67□□□□□ -0.38
HMGCS1-201ENST00000325110 KCNAB2Q13303 367 aa12.67□□□□□ -0.38
HMGCS1-201ENST00000325110 TTC23Q5W5X9 447 aa12.67□□□□□ -0.38
HMGCS1-201ENST00000325110 DUS1LQ6P1R4 473 aaKnown RBP12.67□□□□□ -0.38
HMGCS1-201ENST00000325110 FUT10Q6P4F1 479 aa12.67□□□□□ -0.38
HMGCS1-201ENST00000325110 CRTC3Q6UUV7 619 aa12.67□□□□□ -0.38
HMGCS1-201ENST00000325110 TPGS1Q6ZTW0 290 aa12.67□□□□□ -0.38
HMGCS1-201ENST00000325110 BORCS5Q969J3 196 aa12.67□□□□□ -0.38
HMGCS1-201ENST00000325110 BIRC8Q96P09 236 aa12.67□□□□□ -0.38
HMGCS1-201ENST00000325110 RAD21L1Q9H4I0 556 aa12.67□□□□□ -0.38
HMGCS1-201ENST00000325110 RASSF1Q9NS23 344 aa12.67□□□□□ -0.38
HMGCS1-201ENST00000325110 TRPM5Q9NZQ8 1165 aa12.67□□□□□ -0.38
HMGCS1-201ENST00000325110 PTBP2Q9UKA9 531 aaKnown RBP12.67□□□□□ -0.38
HMGCS1-201ENST00000325110 MED16Q9Y2X0 877 aa12.67□□□□□ -0.38
HMGCS1-201ENST00000325110 Q9Y3F1 56 aa12.67□□□□□ -0.38
HMGCS1-201ENST00000325110 OAZ2O95190 189 aa12.67□□□□□ -0.38
HMGCS1-201ENST00000325110 ALDH3A2P51648 485 aa12.67□□□□□ -0.38
HMGCS1-201ENST00000325110 USP41Q3LFD5 358 aa12.67□□□□□ -0.38
HMGCS1-201ENST00000325110 RSPO2Q6UXX9 243 aaPredicted RBP12.67□□□□□ -0.38
HMGCS1-201ENST00000325110 KLHDC8BQ8IXV7 354 aa12.67□□□□□ -0.38
HMGCS1-201ENST00000325110 PLEKHA8Q96JA3 519 aa12.67□□□□□ -0.38
HMGCS1-201ENST00000325110 PPP3R2Q96LZ3 170 aa12.67□□□□□ -0.38
HMGCS1-201ENST00000325110 NSMCE3Q96MG7 304 aa12.67□□□□□ -0.38
HMGCS1-201ENST00000325110 MYOCQ99972 504 aa12.67□□□□□ -0.38
HMGCS1-201ENST00000325110 RUBCNLQ9H714 662 aa12.67□□□□□ -0.38
HMGCS1-201ENST00000325110 TMEM165Q9HC07 324 aa12.67□□□□□ -0.38
HMGCS1-201ENST00000325110 ABT1Q9ULW3 272 aaKnown RBP12.67□□□□□ -0.38
HMGCS1-201ENST00000325110 TNPO3Q9Y5L0 923 aaKnown RBP12.67□□□□□ -0.38
HMGCS1-201ENST00000325110 MIA3Q5JRA6 1907 aa12.67□□□□□ -0.38
HMGCS1-201ENST00000325110 KRT87PA6NCN2 255 aa12.67□□□□□ -0.38
HMGCS1-201ENST00000325110 CXCR6O00574 342 aa12.67□□□□□ -0.38
HMGCS1-201ENST00000325110 STX16O14662 325 aa12.67□□□□□ -0.38
HMGCS1-201ENST00000325110 SEPT4O43236 478 aa12.67□□□□□ -0.38
HMGCS1-201ENST00000325110 CLDN11O75508 207 aa12.67□□□□□ -0.38
HMGCS1-201ENST00000325110 SERPINA1P01009 418 aa12.67□□□□□ -0.38
HMGCS1-201ENST00000325110 AQP1P29972 269 aa12.67□□□□□ -0.38
HMGCS1-201ENST00000325110 S100A3P33764 101 aa12.67□□□□□ -0.38
HMGCS1-201ENST00000325110 CDH4P55283 916 aa12.67□□□□□ -0.38
HMGCS1-201ENST00000325110 EMX2Q04743 252 aa12.67□□□□□ -0.38
HMGCS1-201ENST00000325110 PHKG1Q16816 387 aa12.67□□□□□ -0.38
HMGCS1-201ENST00000325110 TYSND1Q2T9J0 566 aa12.67□□□□□ -0.38
HMGCS1-201ENST00000325110 PIWIL3Q7Z3Z3 882 aaKnown RBP12.67□□□□□ -0.38
HMGCS1-201ENST00000325110 RTN4RL1Q86UN2 441 aaPredicted RBP12.67□□□□□ -0.38
HMGCS1-201ENST00000325110 GPR150Q8NGU9 434 aa12.67□□□□□ -0.38
HMGCS1-201ENST00000325110 FRS2Q8WU20 508 aa12.67□□□□□ -0.38
HMGCS1-201ENST00000325110 STON2Q8WXE9 905 aa12.67□□□□□ -0.38
HMGCS1-201ENST00000325110 LRTM1Q9HBL6 345 aa12.67□□□□□ -0.38
HMGCS1-201ENST00000325110 TRNAU1APQ9NX07 287 aaKnown RBP12.67□□□□□ -0.38
HMGCS1-201ENST00000325110 DAPK2Q9UIK4 370 aa12.67□□□□□ -0.38
HMGCS1-201ENST00000325110 PDE10AQ9Y233 779 aa12.67□□□□□ -0.38
HMGCS1-201ENST00000325110 hCG_2039718K7EN88 272 aa12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 B3GALT4O96024 378 aa12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 ESR1P03372 595 aa12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 EPB42P16452 691 aa12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 HTR1EP28566 365 aa12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 FMO3P31513 532 aa12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 GNPDA1P46926 289 aa12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 SMAD3P84022 425 aaKnown RBP12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 PDCD4Q53EL6 469 aaKnown RBP12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 SNX29P2Q8IUI4 249 aa12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 COLGALT2Q8IYK4 626 aa12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 ZNF683Q8IZ20 524 aa12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 DBF4BQ8NFT6 615 aa12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 MGME1Q9BQP7 344 aa12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 EBPLQ9BY08 206 aa12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 LHPPQ9H008 270 aa12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 POPDC3Q9HBV1 291 aa12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 MYO7AQ13402 2215 aa12.66□□□□□ -0.38
HMGCS1-201ENST00000325110 LOC730098B7Z3J9 87 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms