RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 RAD1O60671 282 aa14.22□□□□□ -0.13
PPP1CA-201ENST00000312989 TIAF1O95411 115 aa14.22□□□□□ -0.13
PPP1CA-201ENST00000312989 PRB1P04280 392 aa14.22□□□□□ -0.13
PPP1CA-201ENST00000312989 NELFEP18615 380 aaKnown RBP14.22□□□□□ -0.13
PPP1CA-201ENST00000312989 NMBRP28336 390 aa14.22□□□□□ -0.13
PPP1CA-201ENST00000312989 CD151P48509 253 aa14.22□□□□□ -0.13
PPP1CA-201ENST00000312989 SEPHS1P49903 392 aa14.22□□□□□ -0.13
PPP1CA-201ENST00000312989 BASP1P80723 227 aaKnown RBP14.22□□□□□ -0.13
PPP1CA-201ENST00000312989 RHDQ02161 417 aa14.22□□□□□ -0.13
PPP1CA-201ENST00000312989 RPA4Q13156 261 aa14.22□□□□□ -0.13
PPP1CA-201ENST00000312989 BOP1Q14137 746 aaKnown RBP14.22□□□□□ -0.13
PPP1CA-201ENST00000312989 TRIP13Q15645 432 aaPredicted RBP14.22□□□□□ -0.13
PPP1CA-201ENST00000312989 PCID2Q5JVF3 399 aa14.22□□□□□ -0.13
PPP1CA-201ENST00000312989 LRRC8BQ6P9F7 803 aa14.22□□□□□ -0.13
PPP1CA-201ENST00000312989 NAPRTQ6XQN6 538 aa14.22□□□□□ -0.13
PPP1CA-201ENST00000312989 LDB1Q86U70 411 aaPredicted RBP14.22□□□□□ -0.13
PPP1CA-201ENST00000312989 LSM14AQ8ND56 463 aaKnown RBP14.22□□□□□ -0.13
PPP1CA-201ENST00000312989 OR4L1Q8NH43 312 aa14.22□□□□□ -0.13
PPP1CA-201ENST00000312989 MAP3K3Q99759 626 aa14.22□□□□□ -0.13
PPP1CA-201ENST00000312989 KIFC1Q9BW19 673 aa14.22□□□□□ -0.13
PPP1CA-201ENST00000312989 AP1M1Q9BXS5 423 aa14.22□□□□□ -0.13
PPP1CA-201ENST00000312989 SYBUQ9NX95 663 aa14.22□□□□□ -0.13
PPP1CA-201ENST00000312989 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.22□□□□□ -0.13
PPP1CA-201ENST00000312989 BTN3A3O00478 584 aa14.21□□□□□ -0.14
PPP1CA-201ENST00000312989 STK17BO94768 372 aa14.21□□□□□ -0.14
PPP1CA-201ENST00000312989 GSTM1P09488 218 aa14.21□□□□□ -0.14
PPP1CA-201ENST00000312989 FGF5P12034 268 aa14.21□□□□□ -0.14
PPP1CA-201ENST00000312989 LIFP15018 202 aa14.21□□□□□ -0.14
PPP1CA-201ENST00000312989 FOLR1P15328 257 aa14.21□□□□□ -0.14
PPP1CA-201ENST00000312989 LMAN1P49257 510 aa14.21□□□□□ -0.14
PPP1CA-201ENST00000312989 KPNA2P52292 529 aaKnown RBP14.21□□□□□ -0.14
PPP1CA-201ENST00000312989 SESN2P58004 480 aaPredicted RBP14.21□□□□□ -0.14
PPP1CA-201ENST00000312989 GSTM4Q03013 218 aa14.21□□□□□ -0.14
PPP1CA-201ENST00000312989 LINC00303Q3SY05 128 aa14.21□□□□□ -0.14
PPP1CA-201ENST00000312989 CACHD1Q5VU97 1274 aa14.21□□□□□ -0.14
PPP1CA-201ENST00000312989 IRGCQ6NXR0 463 aa14.21□□□□□ -0.14
PPP1CA-201ENST00000312989 CEACAM20Q6UY09 585 aa14.21□□□□□ -0.14
PPP1CA-201ENST00000312989 C4orf22Q6V702 233 aa14.21□□□□□ -0.14
PPP1CA-201ENST00000312989 NLRP9Q7RTR0 991 aa14.21□□□□□ -0.14
PPP1CA-201ENST00000312989 CAND1Q86VP6 1230 aaKnown RBP14.21□□□□□ -0.14
PPP1CA-201ENST00000312989 MPP5Q8N3R9 675 aa14.21□□□□□ -0.14
PPP1CA-201ENST00000312989 ACTRT1Q8TDG2 376 aa14.21□□□□□ -0.14
PPP1CA-201ENST00000312989 CPT1BQ92523 772 aa14.21□□□□□ -0.14
PPP1CA-201ENST00000312989 MFSD3Q96ES6 412 aa14.21□□□□□ -0.14
PPP1CA-201ENST00000312989 ZDHHC12Q96GR4 267 aa14.21□□□□□ -0.14
PPP1CA-201ENST00000312989 PBKQ96KB5 322 aa14.21□□□□□ -0.14
PPP1CA-201ENST00000312989 OSBPL9Q96SU4 736 aa14.21□□□□□ -0.14
PPP1CA-201ENST00000312989 TRIM56Q9BRZ2 755 aaKnown RBP14.21□□□□□ -0.14
PPP1CA-201ENST00000312989 SLC12A9Q9BXP2 914 aa14.21□□□□□ -0.14
PPP1CA-201ENST00000312989 P2RY12Q9H244 342 aa14.21□□□□□ -0.14
PPP1CA-201ENST00000312989 HOMER3Q9NSC5 361 aa14.21□□□□□ -0.14
PPP1CA-201ENST00000312989 HRASLS2Q9NWW9 162 aa14.21□□□□□ -0.14
PPP1CA-201ENST00000312989 BOD1L1Q8NFC6 3051 aa14.2□□□□□ -0.14
PPP1CA-201ENST00000312989 LOC101059948A0A1B0GTJ6 334 aa14.2□□□□□ -0.14
PPP1CA-201ENST00000312989 TK2O00142 265 aa14.2□□□□□ -0.14
PPP1CA-201ENST00000312989 LIN7AO14910 233 aaPredicted RBP14.2□□□□□ -0.14
PPP1CA-201ENST00000312989 ZNF185O15231 689 aa14.2□□□□□ -0.14
PPP1CA-201ENST00000312989 AVILO75366 819 aa14.2□□□□□ -0.14
PPP1CA-201ENST00000312989 MGAT1P26572 445 aa14.2□□□□□ -0.14
PPP1CA-201ENST00000312989 CCR7P32248 378 aa14.2□□□□□ -0.14
PPP1CA-201ENST00000312989 COILP38432 576 aaPredicted RBP14.2□□□□□ -0.14
PPP1CA-201ENST00000312989 MAGEA3P43357 314 aa14.2□□□□□ -0.14
PPP1CA-201ENST00000312989 ARCN1P48444 511 aaKnown RBP14.2□□□□□ -0.14
PPP1CA-201ENST00000312989 LAMB3Q13751 1172 aa14.2□□□□□ -0.14
PPP1CA-201ENST00000312989 KCNAB1Q14722 419 aa14.2□□□□□ -0.14
PPP1CA-201ENST00000312989 MANEAQ5SRI9 462 aa14.2□□□□□ -0.14
PPP1CA-201ENST00000312989 FBXO38Q6PIJ6 1188 aa14.2□□□□□ -0.14
PPP1CA-201ENST00000312989 VRK3Q8IV63 474 aa14.2□□□□□ -0.14
PPP1CA-201ENST00000312989 PHC3Q8NDX5 983 aa14.2□□□□□ -0.14
PPP1CA-201ENST00000312989 ACVR1CQ8NER5 493 aa14.2□□□□□ -0.14
PPP1CA-201ENST00000312989 PPHLN1Q8NEY8 458 aaKnown RBP14.2□□□□□ -0.14
PPP1CA-201ENST00000312989 OR52E1Q8NGJ3 308 aa14.2□□□□□ -0.14
PPP1CA-201ENST00000312989 FLVCR1-AS1Q8TAF5 88 aa14.2□□□□□ -0.14
PPP1CA-201ENST00000312989 SLC39A7Q92504 469 aa14.2□□□□□ -0.14
PPP1CA-201ENST00000312989 UBXN4Q92575 508 aa14.2□□□□□ -0.14
PPP1CA-201ENST00000312989 RNF31Q96EP0 1072 aa14.2□□□□□ -0.14
PPP1CA-201ENST00000312989 WBP1Q96G27 269 aa14.2□□□□□ -0.14
PPP1CA-201ENST00000312989 OR6C1Q96RD1 312 aa14.2□□□□□ -0.14
PPP1CA-201ENST00000312989 CD180Q99467 661 aa14.2□□□□□ -0.14
PPP1CA-201ENST00000312989 ZPBPQ9BS86 351 aa14.2□□□□□ -0.14
PPP1CA-201ENST00000312989 MENTQ9BUN1 341 aa14.2□□□□□ -0.14
PPP1CA-201ENST00000312989 IL22Q9GZX6 179 aa14.2□□□□□ -0.14
PPP1CA-201ENST00000312989 TFB2MQ9H5Q4 396 aaKnown RBP14.2□□□□□ -0.14
PPP1CA-201ENST00000312989 MRM3Q9HC36 420 aaKnown RBP14.2□□□□□ -0.14
PPP1CA-201ENST00000312989 POMT2Q9UKY4 750 aa14.2□□□□□ -0.14
PPP1CA-201ENST00000312989 SNX12Q9UMY4 172 aa14.2□□□□□ -0.14
PPP1CA-201ENST00000312989 OR6C74A6NCV1 312 aa14.19□□□□□ -0.14
PPP1CA-201ENST00000312989 TLCD2A6NGC4 264 aa14.19□□□□□ -0.14
PPP1CA-201ENST00000312989 IQCF5A8MTL0 148 aa14.19□□□□□ -0.14
PPP1CA-201ENST00000312989 BTN3A1O00481 513 aa14.19□□□□□ -0.14
PPP1CA-201ENST00000312989 POLR1CO15160 346 aaPredicted RBP14.19□□□□□ -0.14
PPP1CA-201ENST00000312989 NRDCO43847 1150 aa14.19□□□□□ -0.14
PPP1CA-201ENST00000312989 GPC4O75487 556 aa14.19□□□□□ -0.14
PPP1CA-201ENST00000312989 RASSF9O75901 435 aa14.19□□□□□ -0.14
PPP1CA-201ENST00000312989 F8A1P23610 371 aa14.19□□□□□ -0.14
PPP1CA-201ENST00000312989 NDUFS1P28331 727 aa14.19□□□□□ -0.14
PPP1CA-201ENST00000312989 NPY2RP49146 381 aa14.19□□□□□ -0.14
PPP1CA-201ENST00000312989 PPM1FP49593 454 aaPredicted RBP14.19□□□□□ -0.14
PPP1CA-201ENST00000312989 VPS41P49754 854 aa14.19□□□□□ -0.14
PPP1CA-201ENST00000312989 CYP4F2P78329 520 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms