RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 SNRPB2P08579 225 aaKnown RBP20.85■□□□□ 0.93
ATG4D-201ENST00000309469 PRR35P0CG20 571 aa20.85■□□□□ 0.93
ATG4D-201ENST00000309469 ARL1P40616 181 aaPredicted RBP20.85■□□□□ 0.93
ATG4D-201ENST00000309469 GRIA2P42262 883 aa20.85■□□□□ 0.93
ATG4D-201ENST00000309469 GDF5P43026 501 aa20.85■□□□□ 0.93
ATG4D-201ENST00000309469 RASGEF1AQ8N9B8 481 aa20.85■□□□□ 0.93
ATG4D-201ENST00000309469 CFAP61Q8NHU2 1237 aa20.85■□□□□ 0.93
ATG4D-201ENST00000309469 FGF14Q92915 247 aa20.85■□□□□ 0.93
ATG4D-201ENST00000309469 TRIM54Q9BYV2 358 aa20.85■□□□□ 0.93
ATG4D-201ENST00000309469 PARVBQ9HBI1 364 aa20.85■□□□□ 0.93
ATG4D-201ENST00000309469 COQ6Q9Y2Z9 468 aa20.85■□□□□ 0.93
ATG4D-201ENST00000309469 K7EPI3 171 aa20.84■□□□□ 0.93
ATG4D-201ENST00000309469 CAPN1P07384 714 aa20.84■□□□□ 0.93
ATG4D-201ENST00000309469 GNAZP19086 355 aa20.84■□□□□ 0.93
ATG4D-201ENST00000309469 CCNG1P51959 295 aa20.84■□□□□ 0.93
ATG4D-201ENST00000309469 MTTPP55157 894 aa20.84■□□□□ 0.93
ATG4D-201ENST00000309469 TRAF3Q13114 568 aa20.84■□□□□ 0.93
ATG4D-201ENST00000309469 KIF19Q2TAC6 998 aa20.84■□□□□ 0.93
ATG4D-201ENST00000309469 OGFOD2Q6N063 350 aa20.84■□□□□ 0.93
ATG4D-201ENST00000309469 PAOXQ6QHF9 649 aa20.84■□□□□ 0.93
ATG4D-201ENST00000309469 SCIMPQ6UWF3 145 aa20.84■□□□□ 0.93
ATG4D-201ENST00000309469 MBOAT1Q6ZNC8 495 aa20.84■□□□□ 0.93
ATG4D-201ENST00000309469 ERN2Q76MJ5 926 aaKnown RBP20.84■□□□□ 0.93
ATG4D-201ENST00000309469 SPATA19Q7Z5L4 167 aa20.84■□□□□ 0.93
ATG4D-201ENST00000309469 MILR1Q7Z6M3 343 aa20.84■□□□□ 0.93
ATG4D-201ENST00000309469 PGAM4Q8N0Y7 254 aa20.84■□□□□ 0.93
ATG4D-201ENST00000309469 SNX31Q8N9S9 440 aa20.84■□□□□ 0.93
ATG4D-201ENST00000309469 ASZ1Q8WWH4 475 aa20.84■□□□□ 0.93
ATG4D-201ENST00000309469 ARL15Q9NXU5 204 aa20.84■□□□□ 0.93
ATG4D-201ENST00000309469 CACNA2D2Q9NY47 1150 aa20.84■□□□□ 0.93
ATG4D-201ENST00000309469 C1QTNF3-AMACRE9PGA6 284 aa20.84■□□□□ 0.93
ATG4D-201ENST00000309469 INPP4BO15327 924 aa20.84■□□□□ 0.93
ATG4D-201ENST00000309469 SLC16A5O15375 505 aa20.84■□□□□ 0.93
ATG4D-201ENST00000309469 KATNA1O75449 491 aa20.84■□□□□ 0.93
ATG4D-201ENST00000309469 RECQL5O94762 991 aaPredicted RBP20.84■□□□□ 0.93
ATG4D-201ENST00000309469 CDKL1Q00532 357 aa20.84■□□□□ 0.93
ATG4D-201ENST00000309469 TMEM115Q12893 351 aaPredicted RBP20.84■□□□□ 0.93
ATG4D-201ENST00000309469 TMEM52BQ4KMG9 183 aa20.84■□□□□ 0.93
ATG4D-201ENST00000309469 TCHHL1Q5QJ38 904 aaPredicted RBP20.84■□□□□ 0.93
ATG4D-201ENST00000309469 EGFLAMQ63HQ2 1017 aa20.84■□□□□ 0.93
ATG4D-201ENST00000309469 NEK10Q6ZWH5 1172 aa20.84■□□□□ 0.93
ATG4D-201ENST00000309469 HPS6Q86YV9 775 aa20.84■□□□□ 0.93
ATG4D-201ENST00000309469 EFCAB3Q8N7B9 438 aa20.84■□□□□ 0.93
ATG4D-201ENST00000309469 OR9I1Q8NGQ6 314 aa20.84■□□□□ 0.93
ATG4D-201ENST00000309469 RPP25Q9BUL9 199 aaKnown RBP20.84■□□□□ 0.93
ATG4D-201ENST00000309469 SLC25A23Q9BV35 468 aa20.84■□□□□ 0.93
ATG4D-201ENST00000309469 WDR41Q9HAD4 459 aa20.84■□□□□ 0.93
ATG4D-201ENST00000309469 RIC8BQ9NVN3 520 aa20.84■□□□□ 0.93
ATG4D-201ENST00000309469 C15orf41Q9Y2V0 281 aa20.84■□□□□ 0.93
ATG4D-201ENST00000309469 KIAA1549LQ6ZVL6 1849 aa20.83■□□□□ 0.93
ATG4D-201ENST00000309469 GFYI3L273 518 aa20.83■□□□□ 0.93
ATG4D-201ENST00000309469 MMP20O60882 483 aa20.83■□□□□ 0.93
ATG4D-201ENST00000309469 STK16O75716 305 aa20.83■□□□□ 0.93
ATG4D-201ENST00000309469 SORBS2O94875 1100 aaKnown RBP20.83■□□□□ 0.93
ATG4D-201ENST00000309469 HIST1H2AGP0C0S8 130 aaPredicted RBP20.83■□□□□ 0.93
ATG4D-201ENST00000309469 C6P13671 934 aa20.83■□□□□ 0.93
ATG4D-201ENST00000309469 HIST1H2ADP20671 130 aa20.83■□□□□ 0.93
ATG4D-201ENST00000309469 CTSCP53634 463 aa20.83■□□□□ 0.93
ATG4D-201ENST00000309469 IRX1P78414 480 aaPredicted RBP20.83■□□□□ 0.93
ATG4D-201ENST00000309469 CREB5Q02930 508 aa20.83■□□□□ 0.93
ATG4D-201ENST00000309469 SP140Q13342 867 aa20.83■□□□□ 0.93
ATG4D-201ENST00000309469 RCN1Q15293 331 aa20.83■□□□□ 0.93
ATG4D-201ENST00000309469 GSTA3Q16772 222 aa20.83■□□□□ 0.93
ATG4D-201ENST00000309469 ITPRIPL2Q3MIP1 535 aa20.83■□□□□ 0.93
ATG4D-201ENST00000309469 ZNF765Q7L2R6 523 aa20.83■□□□□ 0.93
ATG4D-201ENST00000309469 FUNDC1Q8IVP5 155 aa20.83■□□□□ 0.93
ATG4D-201ENST00000309469 MIER2Q8N344 545 aa20.83■□□□□ 0.93
ATG4D-201ENST00000309469 CHCHD4Q8N4Q1 142 aa20.83■□□□□ 0.93
ATG4D-201ENST00000309469 OR2T11Q8NH01 316 aa20.83■□□□□ 0.93
ATG4D-201ENST00000309469 HIST1H2AHQ96KK5 128 aa20.83■□□□□ 0.93
ATG4D-201ENST00000309469 HIST1H2AJQ99878 128 aa20.83■□□□□ 0.93
ATG4D-201ENST00000309469 H2AFJQ9BTM1 129 aa20.83■□□□□ 0.93
ATG4D-201ENST00000309469 TRMT61BQ9BVS5 477 aaKnown RBP20.83■□□□□ 0.93
ATG4D-201ENST00000309469 CNOT6Q9ULM6 557 aaKnown RBP20.83■□□□□ 0.93
ATG4D-201ENST00000309469 FBP2O00757 339 aa20.82■□□□□ 0.92
ATG4D-201ENST00000309469 SLCO2B1O94956 709 aa20.82■□□□□ 0.92
ATG4D-201ENST00000309469 APODP05090 189 aa20.82■□□□□ 0.92
ATG4D-201ENST00000309469 IDO1P14902 403 aa20.82■□□□□ 0.92
ATG4D-201ENST00000309469 GGT5P36269 586 aa20.82■□□□□ 0.92
ATG4D-201ENST00000309469 PSMD8P48556 350 aa20.82■□□□□ 0.92
ATG4D-201ENST00000309469 MMEL1Q495T6 779 aa20.82■□□□□ 0.92
ATG4D-201ENST00000309469 TTC23LQ6PF05 361 aa20.82■□□□□ 0.92
ATG4D-201ENST00000309469 BNC2Q6ZN30 1099 aaPredicted RBP20.82■□□□□ 0.92
ATG4D-201ENST00000309469 NUDT18Q6ZVK8 323 aa20.82■□□□□ 0.92
ATG4D-201ENST00000309469 TCAIMQ8N3R3 496 aa20.82■□□□□ 0.92
ATG4D-201ENST00000309469 ERLEC1Q96DZ1 483 aa20.82■□□□□ 0.92
ATG4D-201ENST00000309469 NUS1Q96E22 293 aa20.82■□□□□ 0.92
ATG4D-201ENST00000309469 CDRT15Q96T59 188 aa20.82■□□□□ 0.92
ATG4D-201ENST00000309469 SERPINI1Q99574 410 aa20.82■□□□□ 0.92
ATG4D-201ENST00000309469 HDAC8Q9BY41 377 aa20.82■□□□□ 0.92
ATG4D-201ENST00000309469 SDR39U1Q9NRG7 319 aaPredicted RBP20.82■□□□□ 0.92
ATG4D-201ENST00000309469 POMPQ9Y244 141 aa20.82■□□□□ 0.92
ATG4D-201ENST00000309469 CFLARO15519 480 aa20.82■□□□□ 0.92
ATG4D-201ENST00000309469 TSPAN6O43657 245 aa20.82■□□□□ 0.92
ATG4D-201ENST00000309469 LZTS3O60299 673 aaPredicted RBP20.82■□□□□ 0.92
ATG4D-201ENST00000309469 ATG13O75143 517 aa20.82■□□□□ 0.92
ATG4D-201ENST00000309469 SOD1P00441 154 aa20.82■□□□□ 0.92
ATG4D-201ENST00000309469 EPB42P16452 691 aa20.82■□□□□ 0.92
ATG4D-201ENST00000309469 DLX2Q07687 328 aaPredicted RBP20.82■□□□□ 0.92
ATG4D-201ENST00000309469 REP15Q6BDI9 236 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms