RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 RBMX2Q9Y388 322 aaKnown RBP16.32■□□□□ 0.2
SSH3-201ENST00000308127 ZFP37Q9Y6Q3 630 aaPredicted RBP16.32■□□□□ 0.2
SSH3-201ENST00000308127 OR7A17O14581 309 aa16.32■□□□□ 0.2
SSH3-201ENST00000308127 MYCLP1P12525 358 aaPredicted RBP16.32■□□□□ 0.2
SSH3-201ENST00000308127 CDH3P22223 829 aa16.32■□□□□ 0.2
SSH3-201ENST00000308127 HOXD9P28356 352 aaPredicted RBP16.32■□□□□ 0.2
SSH3-201ENST00000308127 IL5RAQ01344 420 aa16.32■□□□□ 0.2
SSH3-201ENST00000308127 TWF1Q12792 350 aa16.32■□□□□ 0.2
SSH3-201ENST00000308127 TRIM16LQ309B1 348 aa16.32■□□□□ 0.2
SSH3-201ENST00000308127 PROSER1Q86XN7 944 aa16.32■□□□□ 0.2
SSH3-201ENST00000308127 NDNFQ8TB73 568 aa16.32■□□□□ 0.2
SSH3-201ENST00000308127 ZFP90Q8TF47 636 aa16.32■□□□□ 0.2
SSH3-201ENST00000308127 TRIB3Q96RU7 358 aa16.32■□□□□ 0.2
SSH3-201ENST00000308127 COMMD8Q9NX08 183 aa16.32■□□□□ 0.2
SSH3-201ENST00000308127 GREB1Q4ZG55 1949 aa16.32■□□□□ 0.2
SSH3-201ENST00000308127 NT5C1B-RDH14C9J2C7 533 aa16.32■□□□□ 0.2
SSH3-201ENST00000308127 LSM1O15116 133 aaKnown RBP16.32■□□□□ 0.2
SSH3-201ENST00000308127 VPS4BO75351 444 aa16.32■□□□□ 0.2
SSH3-201ENST00000308127 IRF1P10914 325 aa16.32■□□□□ 0.2
SSH3-201ENST00000308127 GGT1P19440 569 aa16.32■□□□□ 0.2
SSH3-201ENST00000308127 TACR2P21452 398 aa16.32■□□□□ 0.2
SSH3-201ENST00000308127 TTKP33981 857 aa16.32■□□□□ 0.2
SSH3-201ENST00000308127 HTR7P34969 479 aa16.32■□□□□ 0.2
SSH3-201ENST00000308127 SMN1Q16637 294 aaKnown RBP16.32■□□□□ 0.2
SSH3-201ENST00000308127 GTF2IRD2BQ6EKJ0 949 aa16.32■□□□□ 0.2
SSH3-201ENST00000308127 TXNDC11Q6PKC3 985 aa16.32■□□□□ 0.2
SSH3-201ENST00000308127 GTF2IRD2Q86UP8 949 aa16.32■□□□□ 0.2
SSH3-201ENST00000308127 TRPV1Q8NER1 839 aa16.32■□□□□ 0.2
SSH3-201ENST00000308127 GTF3C2Q8WUA4 911 aaPredicted RBP16.32■□□□□ 0.2
SSH3-201ENST00000308127 TAMM41Q96BW9 452 aa16.32■□□□□ 0.2
SSH3-201ENST00000308127 TRMT13Q9NUP7 481 aaKnown RBP16.32■□□□□ 0.2
SSH3-201ENST00000308127 SLC25A37Q9NYZ2 338 aa16.32■□□□□ 0.2
SSH3-201ENST00000308127 KLQ9UEF7 1012 aa16.32■□□□□ 0.2
SSH3-201ENST00000308127 SH3BP1Q9Y3L3 701 aa16.32■□□□□ 0.2
SSH3-201ENST00000308127 PATJQ8NI35 1801 aa16.32■□□□□ 0.2
SSH3-201ENST00000308127 NLRC5Q86WI3 1866 aa16.31■□□□□ 0.2
SSH3-201ENST00000308127 LRATO95237 230 aa16.31■□□□□ 0.2
SSH3-201ENST00000308127 ALPIP09923 528 aa16.31■□□□□ 0.2
SSH3-201ENST00000308127 VBP1P61758 197 aa16.31■□□□□ 0.2
SSH3-201ENST00000308127 VAC14Q08AM6 782 aa16.31■□□□□ 0.2
SSH3-201ENST00000308127 CRY1Q16526 586 aa16.31■□□□□ 0.2
SSH3-201ENST00000308127 PGS1Q32NB8 556 aa16.31■□□□□ 0.2
SSH3-201ENST00000308127 COQ5Q5HYK3 327 aa16.31■□□□□ 0.2
SSH3-201ENST00000308127 AFTPHQ6ULP2 937 aa16.31■□□□□ 0.2
SSH3-201ENST00000308127 SLC16A12Q6ZSM3 486 aa16.31■□□□□ 0.2
SSH3-201ENST00000308127 RNF168Q8IYW5 571 aaPredicted RBP16.31■□□□□ 0.2
SSH3-201ENST00000308127 PAF1Q8N7H5 531 aa16.31■□□□□ 0.2
SSH3-201ENST00000308127 LKAAEAR1Q8TD35 194 aa16.31■□□□□ 0.2
SSH3-201ENST00000308127 EGFL8Q99944 293 aa16.31■□□□□ 0.2
SSH3-201ENST00000308127 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.31■□□□□ 0.2
SSH3-201ENST00000308127 VNN3Q9NY84 501 aa16.31■□□□□ 0.2
SSH3-201ENST00000308127 ZIM2Q9NZV7 527 aa16.31■□□□□ 0.2
SSH3-201ENST00000308127 HACD3Q9P035 362 aa16.31■□□□□ 0.2
SSH3-201ENST00000308127 PAIP2BQ9ULR5 123 aaKnown RBP16.31■□□□□ 0.2
SSH3-201ENST00000308127 USP34Q70CQ2 3546 aa16.31■□□□□ 0.2
SSH3-201ENST00000308127 A0A0U1RQF3 1178 aa16.31■□□□□ 0.2
SSH3-201ENST00000308127 TRIM43BA6NCK2 446 aa16.31■□□□□ 0.2
SSH3-201ENST00000308127 TBC1D4O60343 1298 aa16.31■□□□□ 0.2
SSH3-201ENST00000308127 EFNA1P20827 205 aaPredicted RBP16.31■□□□□ 0.2
SSH3-201ENST00000308127 EIF2B2P49770 351 aaKnown RBP16.31■□□□□ 0.2
SSH3-201ENST00000308127 GP2P55259 537 aaKnown RBP16.31■□□□□ 0.2
SSH3-201ENST00000308127 GTF2H3Q13889 308 aa16.31■□□□□ 0.2
SSH3-201ENST00000308127 SCML4Q8N228 414 aa16.31■□□□□ 0.2
SSH3-201ENST00000308127 UBE2FQ969M7 185 aa16.31■□□□□ 0.2
SSH3-201ENST00000308127 FEM1AQ9BSK4 669 aa16.31■□□□□ 0.2
SSH3-201ENST00000308127 HPS4Q9NQG7 708 aa16.31■□□□□ 0.2
SSH3-201ENST00000308127 PTPRDP23468 1912 aa16.31■□□□□ 0.2
SSH3-201ENST00000308127 H0Y626 953 aa16.3■□□□□ 0.2
SSH3-201ENST00000308127 H0YAE9 185 aa16.3■□□□□ 0.2
SSH3-201ENST00000308127 STX7O15400 261 aaKnown RBP16.3■□□□□ 0.2
SSH3-201ENST00000308127 SULT1C4O75897 302 aa16.3■□□□□ 0.2
SSH3-201ENST00000308127 TRIM16O95361 564 aa16.3■□□□□ 0.2
SSH3-201ENST00000308127 TMBIM6P55061 237 aa16.3■□□□□ 0.2
SSH3-201ENST00000308127 IFITM3Q01628 133 aa16.3■□□□□ 0.2
SSH3-201ENST00000308127 GTF2H2Q13888 395 aa16.3■□□□□ 0.2
SSH3-201ENST00000308127 MORN1Q5T089 497 aa16.3■□□□□ 0.2
SSH3-201ENST00000308127 GTF2H2CQ6P1K8 395 aa16.3■□□□□ 0.2
SSH3-201ENST00000308127 BEND5Q7L4P6 421 aa16.3■□□□□ 0.2
SSH3-201ENST00000308127 SLCO6A1Q86UG4 719 aa16.3■□□□□ 0.2
SSH3-201ENST00000308127 DENND1CQ8IV53 801 aa16.3■□□□□ 0.2
SSH3-201ENST00000308127 MSRB3Q8IXL7 192 aa16.3■□□□□ 0.2
SSH3-201ENST00000308127 LIX1Q8N485 282 aa16.3■□□□□ 0.2
SSH3-201ENST00000308127 ZNF555Q8NEP9 628 aa16.3■□□□□ 0.2
SSH3-201ENST00000308127 SLC13A3Q8WWT9 602 aa16.3■□□□□ 0.2
SSH3-201ENST00000308127 HERC2P3Q9BVR0 1158 aa16.3■□□□□ 0.2
SSH3-201ENST00000308127 NACA2Q9H009 215 aa16.3■□□□□ 0.2
SSH3-201ENST00000308127 SCUBE2Q9NQ36 999 aa16.3■□□□□ 0.2
SSH3-201ENST00000308127 GKN1Q9NS71 199 aa16.3■□□□□ 0.2
SSH3-201ENST00000308127 SMPD4Q9NXE4 827 aa16.3■□□□□ 0.2
SSH3-201ENST00000308127 ERVK-18Q9QC07 812 aa16.3■□□□□ 0.2
SSH3-201ENST00000308127 BLOC1S6Q9UL45 172 aa16.3■□□□□ 0.2
SSH3-201ENST00000308127 ERGIC3Q9Y282 383 aa16.3■□□□□ 0.2
SSH3-201ENST00000308127 RAI2Q9Y5P3 530 aa16.3■□□□□ 0.2
SSH3-201ENST00000308127 TDRD15B5MCY1 1934 aaKnown RBP16.3■□□□□ 0.2
SSH3-201ENST00000308127 IGLV3-10A0A075B6K4 115 aa16.3■□□□□ 0.2
SSH3-201ENST00000308127 C2orf81A6NN90 581 aa16.3■□□□□ 0.2
SSH3-201ENST00000308127 CYP4F3Q08477 520 aa16.3■□□□□ 0.2
SSH3-201ENST00000308127 GRSF1Q12849 480 aaKnown RBP eCLIP16.3■□□□□ 0.2
SSH3-201ENST00000308127 TRIM32Q13049 653 aa16.3■□□□□ 0.2
SSH3-201ENST00000308127 RAPSNQ13702 412 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms