RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 HM13Q8TCT9 377 aa19.1■□□□□ 0.65
CXCL3-201ENST00000296026 MR1Q95460 341 aa19.1■□□□□ 0.65
CXCL3-201ENST00000296026 ULK4Q96C45 1275 aa19.1■□□□□ 0.65
CXCL3-201ENST00000296026 CCM2Q9BSQ5 444 aa19.1■□□□□ 0.65
CXCL3-201ENST00000296026 TRIM55Q9BYV6 548 aa19.1■□□□□ 0.65
CXCL3-201ENST00000296026 OSBPL8Q9BZF1 889 aa19.1■□□□□ 0.65
CXCL3-201ENST00000296026 FAM96AQ9H5X1 160 aa19.1■□□□□ 0.65
CXCL3-201ENST00000296026 ANKMY1Q9P2S6 941 aa19.1■□□□□ 0.65
CXCL3-201ENST00000296026 BTRCQ9Y297 605 aa19.1■□□□□ 0.65
CXCL3-201ENST00000296026 HEBP2Q9Y5Z4 205 aa19.1■□□□□ 0.65
CXCL3-201ENST00000296026 ITGALP20701 1170 aa19.09■□□□□ 0.65
CXCL3-201ENST00000296026 PRKAA1Q13131 559 aa19.09■□□□□ 0.65
CXCL3-201ENST00000296026 GPS2Q13227 327 aa19.09■□□□□ 0.65
CXCL3-201ENST00000296026 SARM1Q6SZW1 724 aa19.09■□□□□ 0.65
CXCL3-201ENST00000296026 CCDC110Q8TBZ0 833 aa19.09■□□□□ 0.65
CXCL3-201ENST00000296026 THAP4Q8WY91 577 aa19.09■□□□□ 0.65
CXCL3-201ENST00000296026 MIB2Q96AX9 1013 aa19.09■□□□□ 0.65
CXCL3-201ENST00000296026 SPATA13Q96N96 652 aa19.09■□□□□ 0.65
CXCL3-201ENST00000296026 COPS8Q99627 209 aa19.09■□□□□ 0.65
CXCL3-201ENST00000296026 TBL1YQ9BQ87 522 aa19.09■□□□□ 0.65
CXCL3-201ENST00000296026 TLR10Q9BXR5 811 aa19.09■□□□□ 0.65
CXCL3-201ENST00000296026 FARSAQ9Y285 508 aaKnown RBP19.09■□□□□ 0.65
CXCL3-201ENST00000296026 RCCD1A6NED2 376 aa19.08■□□□□ 0.64
CXCL3-201ENST00000296026 SLC9B1P1A6NJY1 282 aa19.08■□□□□ 0.64
CXCL3-201ENST00000296026 CFAP99D6REC4 459 aa19.08■□□□□ 0.64
CXCL3-201ENST00000296026 CCL22O00626 93 aa19.08■□□□□ 0.64
CXCL3-201ENST00000296026 DDX3YO15523 660 aaKnown RBP19.08■□□□□ 0.64
CXCL3-201ENST00000296026 PDGFAP04085 211 aa19.08■□□□□ 0.64
CXCL3-201ENST00000296026 ATP1B2P14415 290 aaPredicted RBP19.08■□□□□ 0.64
CXCL3-201ENST00000296026 CDH3P22223 829 aa19.08■□□□□ 0.64
CXCL3-201ENST00000296026 PTPN7P35236 360 aa19.08■□□□□ 0.64
CXCL3-201ENST00000296026 HADHAP40939 763 aa19.08■□□□□ 0.64
CXCL3-201ENST00000296026 ZNF140P52738 457 aaPredicted RBP19.08■□□□□ 0.64
CXCL3-201ENST00000296026 MLLT10P55197 1068 aa19.08■□□□□ 0.64
CXCL3-201ENST00000296026 IL10RAQ13651 578 aa19.08■□□□□ 0.64
CXCL3-201ENST00000296026 LAMB3Q13751 1172 aa19.08■□□□□ 0.64
CXCL3-201ENST00000296026 SPARCL1Q14515 664 aa19.08■□□□□ 0.64
CXCL3-201ENST00000296026 DENND5AQ6IQ26 1287 aa19.08■□□□□ 0.64
CXCL3-201ENST00000296026 SNX20Q7Z614 316 aa19.08■□□□□ 0.64
CXCL3-201ENST00000296026 SLC38A9Q8NBW4 561 aa19.08■□□□□ 0.64
CXCL3-201ENST00000296026 ACVR1CQ8NER5 493 aa19.08■□□□□ 0.64
CXCL3-201ENST00000296026 HEXDCQ8WVB3 486 aa19.08■□□□□ 0.64
CXCL3-201ENST00000296026 C19orf43Q9BQ61 176 aa19.08■□□□□ 0.64
CXCL3-201ENST00000296026 SRMSQ9H3Y6 488 aa19.08■□□□□ 0.64
CXCL3-201ENST00000296026 LATS2Q9NRM7 1088 aa19.08■□□□□ 0.64
CXCL3-201ENST00000296026 POMT2Q9UKY4 750 aa19.08■□□□□ 0.64
CXCL3-201ENST00000296026 C17orf113A0A1B0GUU1 675 aa19.07■□□□□ 0.64
CXCL3-201ENST00000296026 CCDC66A2RUB6 948 aa19.07■□□□□ 0.64
CXCL3-201ENST00000296026 CLEC18AA5D8T8 446 aa19.07■□□□□ 0.64
CXCL3-201ENST00000296026 KLK3P07288 261 aaPredicted RBP19.07■□□□□ 0.64
CXCL3-201ENST00000296026 MC4RP32245 332 aa19.07■□□□□ 0.64
CXCL3-201ENST00000296026 NAP1L1P55209 391 aaKnown RBP19.07■□□□□ 0.64
CXCL3-201ENST00000296026 RWDD2BP57060 319 aa19.07■□□□□ 0.64
CXCL3-201ENST00000296026 PRAMEF17Q5VTA0 474 aa19.07■□□□□ 0.64
CXCL3-201ENST00000296026 CPZQ66K79 652 aa19.07■□□□□ 0.64
CXCL3-201ENST00000296026 AADACL2Q6P093 401 aa19.07■□□□□ 0.64
CXCL3-201ENST00000296026 CLEC18BQ6UXF7 455 aa19.07■□□□□ 0.64
CXCL3-201ENST00000296026 ZNF517Q6ZMY9 492 aaPredicted RBP19.07■□□□□ 0.64
CXCL3-201ENST00000296026 CLEC18CQ8NCF0 446 aa19.07■□□□□ 0.64
CXCL3-201ENST00000296026 LCN9Q8WX39 176 aa19.07■□□□□ 0.64
CXCL3-201ENST00000296026 PPP1R2P1Q96PQ5 205 aa19.07■□□□□ 0.64
CXCL3-201ENST00000296026 FERD3LQ96RJ6 166 aa19.07■□□□□ 0.64
CXCL3-201ENST00000296026 CHST8Q9H2A9 424 aa19.07■□□□□ 0.64
CXCL3-201ENST00000296026 COG4Q9H9E3 785 aa19.07■□□□□ 0.64
CXCL3-201ENST00000296026 FANCEQ9HB96 536 aa19.07■□□□□ 0.64
CXCL3-201ENST00000296026 ARNT2Q9HBZ2 717 aa19.07■□□□□ 0.64
CXCL3-201ENST00000296026 C1GALT1Q9NS00 363 aa19.07■□□□□ 0.64
CXCL3-201ENST00000296026 ZDHHC3Q9NYG2 299 aa19.07■□□□□ 0.64
CXCL3-201ENST00000296026 EPN1Q9Y6I3 576 aaPredicted RBP19.07■□□□□ 0.64
CXCL3-201ENST00000296026 DUSP10Q9Y6W6 482 aa19.07■□□□□ 0.64
CXCL3-201ENST00000296026 PTPN13Q12923 2485 aa19.06■□□□□ 0.64
CXCL3-201ENST00000296026 GSAPA4D1B5 854 aa19.06■□□□□ 0.64
CXCL3-201ENST00000296026 MATN2O00339 956 aa19.06■□□□□ 0.64
CXCL3-201ENST00000296026 LDB2O43679 373 aa19.06■□□□□ 0.64
CXCL3-201ENST00000296026 CETN2P41208 172 aa19.06■□□□□ 0.64
CXCL3-201ENST00000296026 CD97P48960 835 aa19.06■□□□□ 0.64
CXCL3-201ENST00000296026 CDKN1CP49918 316 aaPredicted RBP19.06■□□□□ 0.64
CXCL3-201ENST00000296026 GSDMDP57764 484 aa19.06■□□□□ 0.64
CXCL3-201ENST00000296026 CHAF1BQ13112 559 aa19.06■□□□□ 0.64
CXCL3-201ENST00000296026 GPR33Q49SQ1 333 aa19.06■□□□□ 0.64
CXCL3-201ENST00000296026 IZUMO3Q5VZ72 239 aa19.06■□□□□ 0.64
CXCL3-201ENST00000296026 MICALCLQ6ZW33 695 aa19.06■□□□□ 0.64
CXCL3-201ENST00000296026 ATCAYQ86WG3 371 aa19.06■□□□□ 0.64
CXCL3-201ENST00000296026 CPT1BQ92523 772 aa19.06■□□□□ 0.64
CXCL3-201ENST00000296026 LRRC45Q96CN5 670 aa19.06■□□□□ 0.64
CXCL3-201ENST00000296026 CALR3Q96L12 384 aaKnown RBP19.06■□□□□ 0.64
CXCL3-201ENST00000296026 LRFN5Q96NI6 719 aa19.06■□□□□ 0.64
CXCL3-201ENST00000296026 OR52A5Q9H2C5 316 aa19.06■□□□□ 0.64
CXCL3-201ENST00000296026 FEZ2Q9UHY8 353 aaPredicted RBP19.06■□□□□ 0.64
CXCL3-201ENST00000296026 IGLV3-16A0A075B6K0 115 aa19.05■□□□□ 0.64
CXCL3-201ENST00000296026 SOWAHDA6NJG2 315 aa19.05■□□□□ 0.64
CXCL3-201ENST00000296026 ARGFXA6NJG6 315 aa19.05■□□□□ 0.64
CXCL3-201ENST00000296026 MEN1O00255 615 aa19.05■□□□□ 0.64
CXCL3-201ENST00000296026 IFRD1O00458 451 aaPredicted RBP19.05■□□□□ 0.64
CXCL3-201ENST00000296026 BTN3A3O00478 584 aa19.05■□□□□ 0.64
CXCL3-201ENST00000296026 TJP3O95049 919 aa19.05■□□□□ 0.64
CXCL3-201ENST00000296026 PRDX3P30048 256 aaKnown RBP19.05■□□□□ 0.64
CXCL3-201ENST00000296026 ABRQ12979 859 aa19.05■□□□□ 0.64
CXCL3-201ENST00000296026 ZRANB3Q5FWF4 1079 aa19.05■□□□□ 0.64
CXCL3-201ENST00000296026 PLEKHS1Q5SXH7 462 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms