RNA–Protein interactions for RNA: ENST00000291574.8

TRAPPC10-201, Transcript of trafficking protein particle complex 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC10, Length 6,976 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-201ENST00000291574 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.42□□□□□ -0.26
TRAPPC10-201ENST00000291574 ARL5AQ9Y689 179 aa13.42□□□□□ -0.26
TRAPPC10-201ENST00000291574 TMEM131LA2VDJ0 1609 aa13.42□□□□□ -0.26
TRAPPC10-201ENST00000291574 GSAPA4D1B5 854 aa13.42□□□□□ -0.26
TRAPPC10-201ENST00000291574 M0R2N6 131 aa13.42□□□□□ -0.26
TRAPPC10-201ENST00000291574 S100A6P06703 90 aa13.42□□□□□ -0.26
TRAPPC10-201ENST00000291574 DLDP09622 509 aaKnown RBP13.42□□□□□ -0.26
TRAPPC10-201ENST00000291574 SPATA31D3P0C874 917 aa13.42□□□□□ -0.26
TRAPPC10-201ENST00000291574 SMARCB1Q12824 385 aa13.42□□□□□ -0.26
TRAPPC10-201ENST00000291574 NAPRTQ6XQN6 538 aa13.42□□□□□ -0.26
TRAPPC10-201ENST00000291574 SPATA31D4Q6ZUB0 917 aa13.42□□□□□ -0.26
TRAPPC10-201ENST00000291574 OR10Q1Q8NGQ4 319 aa13.42□□□□□ -0.26
TRAPPC10-201ENST00000291574 PIK3R3Q92569 461 aa13.42□□□□□ -0.26
TRAPPC10-201ENST00000291574 GMEB1Q9Y692 573 aa13.42□□□□□ -0.26
TRAPPC10-201ENST00000291574 SHPRHQ149N8 1683 aa13.42□□□□□ -0.26
TRAPPC10-201ENST00000291574 FAM234BA2RU67 622 aa13.42□□□□□ -0.26
TRAPPC10-201ENST00000291574 TREHO43280 583 aa13.42□□□□□ -0.26
TRAPPC10-201ENST00000291574 NME6O75414 186 aaPredicted RBP13.42□□□□□ -0.26
TRAPPC10-201ENST00000291574 IMPDH1P20839 514 aa13.42□□□□□ -0.26
TRAPPC10-201ENST00000291574 RGS8P57771 180 aaPredicted RBP13.42□□□□□ -0.26
TRAPPC10-201ENST00000291574 ERVK-8P63133 956 aa13.42□□□□□ -0.26
TRAPPC10-201ENST00000291574 RHDQ02161 417 aa13.42□□□□□ -0.26
TRAPPC10-201ENST00000291574 PDCD4Q53EL6 469 aaKnown RBP13.42□□□□□ -0.26
TRAPPC10-201ENST00000291574 PPTC7Q8NI37 304 aa13.42□□□□□ -0.26
TRAPPC10-201ENST00000291574 TNFAIP8L1Q8WVP5 186 aa13.42□□□□□ -0.26
TRAPPC10-201ENST00000291574 SLC9A6Q92581 669 aa13.42□□□□□ -0.26
TRAPPC10-201ENST00000291574 AP2M1Q96CW1 435 aa13.42□□□□□ -0.26
TRAPPC10-201ENST00000291574 FBXL20Q96IG2 436 aa13.42□□□□□ -0.26
TRAPPC10-201ENST00000291574 DCSTAMPQ9H295 470 aa13.42□□□□□ -0.26
TRAPPC10-201ENST00000291574 IRGMA1A4Y4 181 aa13.42□□□□□ -0.26
TRAPPC10-201ENST00000291574 GADD45GO95257 159 aa13.42□□□□□ -0.26
TRAPPC10-201ENST00000291574 PSKH1P11801 424 aa13.42□□□□□ -0.26
TRAPPC10-201ENST00000291574 SPAM1P38567 509 aa13.42□□□□□ -0.26
TRAPPC10-201ENST00000291574 GSK3BP49841 420 aa13.42□□□□□ -0.26
TRAPPC10-201ENST00000291574 BRSK1Q8TDC3 778 aa13.42□□□□□ -0.26
TRAPPC10-201ENST00000291574 C1orf21Q9H246 121 aa13.42□□□□□ -0.26
TRAPPC10-201ENST00000291574 MOV10Q9HCE1 1003 aaKnown RBP13.42□□□□□ -0.26
TRAPPC10-201ENST00000291574 CHST10O43529 356 aa13.41□□□□□ -0.26
TRAPPC10-201ENST00000291574 XYLBO75191 536 aa13.41□□□□□ -0.26
TRAPPC10-201ENST00000291574 CCL23P55773 120 aa13.41□□□□□ -0.26
TRAPPC10-201ENST00000291574 ARPC4P59998 168 aa13.41□□□□□ -0.26
TRAPPC10-201ENST00000291574 PHC1P78364 1004 aa13.41□□□□□ -0.26
TRAPPC10-201ENST00000291574 HERC3Q15034 1050 aa13.41□□□□□ -0.26
TRAPPC10-201ENST00000291574 RFTN2Q52LD8 501 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC10-201ENST00000291574 ADGRG2Q8IZP9 1017 aa13.41□□□□□ -0.26
TRAPPC10-201ENST00000291574 SLC43A3Q8NBI5 491 aa13.41□□□□□ -0.26
TRAPPC10-201ENST00000291574 FAM110BQ8TC76 370 aa13.41□□□□□ -0.26
TRAPPC10-201ENST00000291574 STON2Q8WXE9 905 aa13.41□□□□□ -0.26
TRAPPC10-201ENST00000291574 ASAH2Q9NR71 780 aa13.41□□□□□ -0.26
TRAPPC10-201ENST00000291574 SLC22A1O15245 554 aa13.41□□□□□ -0.26
TRAPPC10-201ENST00000291574 IFNGP01579 166 aa13.41□□□□□ -0.26
TRAPPC10-201ENST00000291574 GLUD2P49448 558 aa13.41□□□□□ -0.26
TRAPPC10-201ENST00000291574 NUDT6P53370 316 aa13.41□□□□□ -0.26
TRAPPC10-201ENST00000291574 HERVK_113P63132 956 aa13.41□□□□□ -0.26
TRAPPC10-201ENST00000291574 SEMG2Q02383 582 aa13.41□□□□□ -0.26
TRAPPC10-201ENST00000291574 HSPB3Q12988 150 aa13.41□□□□□ -0.26
TRAPPC10-201ENST00000291574 THOC7Q6I9Y2 204 aaKnown RBP13.41□□□□□ -0.26
TRAPPC10-201ENST00000291574 KLHL24Q6TFL4 600 aa13.41□□□□□ -0.26
TRAPPC10-201ENST00000291574 HID1Q8IV36 788 aa13.41□□□□□ -0.26
TRAPPC10-201ENST00000291574 IGDCC3Q8IVU1 814 aa13.41□□□□□ -0.26
TRAPPC10-201ENST00000291574 OR10G6Q8NH81 332 aa13.41□□□□□ -0.26
TRAPPC10-201ENST00000291574 SLC38A4Q969I6 547 aa13.41□□□□□ -0.26
TRAPPC10-201ENST00000291574 ERVK-6Q9BXR3 956 aa13.41□□□□□ -0.26
TRAPPC10-201ENST00000291574 PCDHGA4Q9Y5G9 962 aa13.41□□□□□ -0.26
TRAPPC10-201ENST00000291574 GTPBP1O00178 669 aaKnown RBP13.41□□□□□ -0.26
TRAPPC10-201ENST00000291574 PRPS2P11908 318 aa13.41□□□□□ -0.26
TRAPPC10-201ENST00000291574 LAPTM5Q13571 262 aa13.41□□□□□ -0.26
TRAPPC10-201ENST00000291574 NCBP2-AS2Q69YL0 99 aa13.41□□□□□ -0.26
TRAPPC10-201ENST00000291574 NUSAP1Q9BXS6 441 aaKnown RBP13.41□□□□□ -0.26
TRAPPC10-201ENST00000291574 TBC1D24Q9ULP9 559 aa13.41□□□□□ -0.26
TRAPPC10-201ENST00000291574 LRRC14BA6NHZ5 514 aa13.41□□□□□ -0.26
TRAPPC10-201ENST00000291574 ORC5O43913 435 aa13.41□□□□□ -0.26
TRAPPC10-201ENST00000291574 LINGO3P0C6S8 592 aa13.41□□□□□ -0.26
TRAPPC10-201ENST00000291574 LAMP2P13473 410 aa13.41□□□□□ -0.26
TRAPPC10-201ENST00000291574 GABRR2P28476 465 aa13.41□□□□□ -0.26
TRAPPC10-201ENST00000291574 GANABQ14697 944 aaKnown RBP13.41□□□□□ -0.26
TRAPPC10-201ENST00000291574 IFI44LQ53G44 452 aa13.41□□□□□ -0.26
TRAPPC10-201ENST00000291574 ZNF557Q8N988 423 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC10-201ENST00000291574 TMEM74Q96NL1 305 aa13.41□□□□□ -0.26
TRAPPC10-201ENST00000291574 IL4I1Q96RQ9 567 aa13.41□□□□□ -0.26
TRAPPC10-201ENST00000291574 C1QTNF7Q9BXJ2 289 aa13.41□□□□□ -0.26
TRAPPC10-201ENST00000291574 HIPK3Q9H422 1215 aa13.41□□□□□ -0.26
TRAPPC10-201ENST00000291574 AKAP7Q9P0M2 348 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC10-201ENST00000291574 CNTN3Q9P232 1028 aa13.41□□□□□ -0.26
TRAPPC10-201ENST00000291574 PPIEQ9UNP9 301 aaKnown RBP13.41□□□□□ -0.26
TRAPPC10-201ENST00000291574 TTC24A2A3L6 582 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC10-201ENST00000291574 ZNF879B4DU55 563 aa13.41□□□□□ -0.26
TRAPPC10-201ENST00000291574 AHSGP02765 367 aa13.41□□□□□ -0.26
TRAPPC10-201ENST00000291574 HOXC6P09630 235 aa13.41□□□□□ -0.26
TRAPPC10-201ENST00000291574 IL7RP16871 459 aa13.41□□□□□ -0.26
TRAPPC10-201ENST00000291574 ATF4P18848 351 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC10-201ENST00000291574 DNASE1L3Q13609 305 aa13.41□□□□□ -0.26
TRAPPC10-201ENST00000291574 USP41Q3LFD5 358 aa13.41□□□□□ -0.26
TRAPPC10-201ENST00000291574 USP43Q70EL4 1123 aa13.41□□□□□ -0.26
TRAPPC10-201ENST00000291574 SPPL2BQ8TCT7 592 aa13.41□□□□□ -0.26
TRAPPC10-201ENST00000291574 GALPQ9UBC7 116 aa13.41□□□□□ -0.26
TRAPPC10-201ENST00000291574 INSIG1O15503 277 aa13.4□□□□□ -0.26
TRAPPC10-201ENST00000291574 CTSEP14091 401 aa13.4□□□□□ -0.26
TRAPPC10-201ENST00000291574 FAUP35544 74 aaKnown RBP13.4□□□□□ -0.26
TRAPPC10-201ENST00000291574 RABL3Q5HYI8 236 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms