RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 MPPE1Q53F39 396 aa15.12■□□□□ 0.01
SHROOM4-201ENST00000289292 ATXN7L2Q5T6C5 722 aaPredicted RBP15.12■□□□□ 0.01
SHROOM4-201ENST00000289292 LEMD2Q8NC56 503 aa15.12■□□□□ 0.01
SHROOM4-201ENST00000289292 SKA1Q96BD8 255 aa15.12■□□□□ 0.01
SHROOM4-201ENST00000289292 KCNA7Q96RP8 456 aa15.12■□□□□ 0.01
SHROOM4-201ENST00000289292 ERVK-6Q9BXR3 956 aa15.12■□□□□ 0.01
SHROOM4-201ENST00000289292 CAMTA1Q9Y6Y1 1673 aa15.12■□□□□ 0.01
SHROOM4-201ENST00000289292 A8MT66 165 aa15.12■□□□□ 0.01
SHROOM4-201ENST00000289292 SCAMP1O15126 338 aa15.12■□□□□ 0.01
SHROOM4-201ENST00000289292 CLPXO76031 633 aa15.12■□□□□ 0.01
SHROOM4-201ENST00000289292 HLA-DQB2P05538 268 aa15.12■□□□□ 0.01
SHROOM4-201ENST00000289292 HOXC6P09630 235 aa15.12■□□□□ 0.01
SHROOM4-201ENST00000289292 RHOQP17081 205 aa15.12■□□□□ 0.01
SHROOM4-201ENST00000289292 SSR2P43308 183 aa15.12■□□□□ 0.01
SHROOM4-201ENST00000289292 SCN1BQ07699 218 aa15.12■□□□□ 0.01
SHROOM4-201ENST00000289292 RBBP4Q09028 425 aa15.12■□□□□ 0.01
SHROOM4-201ENST00000289292 SMARCD3Q6STE5 483 aa15.12■□□□□ 0.01
SHROOM4-201ENST00000289292 SOCS4Q8WXH5 440 aa15.12■□□□□ 0.01
SHROOM4-201ENST00000289292 PRR11Q96HE9 360 aaPredicted RBP15.12■□□□□ 0.01
SHROOM4-201ENST00000289292 IMP3Q9NV31 184 aaKnown RBP15.12■□□□□ 0.01
SHROOM4-201ENST00000289292 PCDHGA10Q9Y5H3 936 aa15.12■□□□□ 0.01
SHROOM4-201ENST00000289292 TM4SF1P30408 202 aa15.12■□□□□ 0.01
SHROOM4-201ENST00000289292 GPD2P43304 727 aa15.12■□□□□ 0.01
SHROOM4-201ENST00000289292 MMP14P50281 582 aa15.12■□□□□ 0.01
SHROOM4-201ENST00000289292 CHIT1Q13231 466 aa15.12■□□□□ 0.01
SHROOM4-201ENST00000289292 LAPTM4AQ15012 233 aa15.12■□□□□ 0.01
SHROOM4-201ENST00000289292 DPYSL2Q16555 572 aa15.12■□□□□ 0.01
SHROOM4-201ENST00000289292 IDNKQ5T6J7 187 aa15.12■□□□□ 0.01
SHROOM4-201ENST00000289292 TBX5Q99593 518 aa15.12■□□□□ 0.01
SHROOM4-201ENST00000289292 AASDHPPTQ9NRN7 309 aa15.12■□□□□ 0.01
SHROOM4-201ENST00000289292 LRRC42Q9Y546 428 aa15.12■□□□□ 0.01
SHROOM4-201ENST00000289292 FABP12A6NFH5 140 aa15.11■□□□□ 0.01
SHROOM4-201ENST00000289292 SPAM1P38567 509 aa15.11■□□□□ 0.01
SHROOM4-201ENST00000289292 CD83Q01151 205 aa15.11■□□□□ 0.01
SHROOM4-201ENST00000289292 CRYBG2Q8N1P7 616 aa15.11■□□□□ 0.01
SHROOM4-201ENST00000289292 TRPV1Q8NER1 839 aa15.11■□□□□ 0.01
SHROOM4-201ENST00000289292 SLC16A10Q8TF71 515 aa15.11■□□□□ 0.01
SHROOM4-201ENST00000289292 ITFG2Q969R8 447 aa15.11■□□□□ 0.01
SHROOM4-201ENST00000289292 FTHL17Q9BXU8 183 aa15.11■□□□□ 0.01
SHROOM4-201ENST00000289292 THG1LQ9NWX6 298 aaKnown RBP15.11■□□□□ 0.01
SHROOM4-201ENST00000289292 SOHLH2Q9NX45 425 aa15.11■□□□□ 0.01
SHROOM4-201ENST00000289292 STOML2Q9UJZ1 356 aa15.11■□□□□ 0.01
SHROOM4-201ENST00000289292 WDR37Q9Y2I8 494 aa15.11■□□□□ 0.01
SHROOM4-201ENST00000289292 A0A088AWK7 358 aa15.11■□□□□ 0.01
SHROOM4-201ENST00000289292 ZNF10P21506 573 aaPredicted RBP15.11■□□□□ 0.01
SHROOM4-201ENST00000289292 DAG1Q14118 895 aa15.11■□□□□ 0.01
SHROOM4-201ENST00000289292 CBX2Q14781 532 aaPredicted RBP15.11■□□□□ 0.01
SHROOM4-201ENST00000289292 CAPN13Q6MZZ7 669 aaPredicted RBP15.11■□□□□ 0.01
SHROOM4-201ENST00000289292 TVP23BQ9NYZ1 205 aa15.11■□□□□ 0.01
SHROOM4-201ENST00000289292 CFAP97Q9P2B7 532 aa15.11■□□□□ 0.01
SHROOM4-201ENST00000289292 DNAJB4Q9UDY4 337 aa15.11■□□□□ 0.01
SHROOM4-201ENST00000289292 PEX16Q9Y5Y5 336 aa15.11■□□□□ 0.01
SHROOM4-201ENST00000289292 SAGP10523 405 aaPredicted RBP15.11■□□□□ 0.01
SHROOM4-201ENST00000289292 CDH1P12830 882 aa15.11■□□□□ 0.01
SHROOM4-201ENST00000289292 FOSL2P15408 326 aa15.11■□□□□ 0.01
SHROOM4-201ENST00000289292 ELK4P28324 431 aa15.11■□□□□ 0.01
SHROOM4-201ENST00000289292 OR1D2P34982 312 aa15.11■□□□□ 0.01
SHROOM4-201ENST00000289292 HMGCS1Q01581 520 aa15.11■□□□□ 0.01
SHROOM4-201ENST00000289292 KLHL24Q6TFL4 600 aa15.11■□□□□ 0.01
SHROOM4-201ENST00000289292 CNTN3Q9P232 1028 aa15.11■□□□□ 0.01
SHROOM4-201ENST00000289292 SLC30A4O14863 429 aa15.11■□□□□ 0.01
SHROOM4-201ENST00000289292 INSIG1O15503 277 aa15.11■□□□□ 0.01
SHROOM4-201ENST00000289292 CPNE3O75131 537 aaKnown RBP15.11■□□□□ 0.01
SHROOM4-201ENST00000289292 DIRAS1O95057 198 aa15.11■□□□□ 0.01
SHROOM4-201ENST00000289292 IFNW1P05000 195 aa15.11■□□□□ 0.01
SHROOM4-201ENST00000289292 PRKACGP22612 351 aa15.11■□□□□ 0.01
SHROOM4-201ENST00000289292 DAOAP59103 153 aa15.11■□□□□ 0.01
SHROOM4-201ENST00000289292 MEP1AQ16819 746 aa15.11■□□□□ 0.01
SHROOM4-201ENST00000289292 PABPC1LQ4VXU2 614 aaKnown RBP15.11■□□□□ 0.01
SHROOM4-201ENST00000289292 UBAP2Q5T6F2 1119 aaKnown RBP15.11■□□□□ 0.01
SHROOM4-201ENST00000289292 SLC39A4Q6P5W5 647 aa15.11■□□□□ 0.01
SHROOM4-201ENST00000289292 RPTNQ6XPR3 784 aa15.11■□□□□ 0.01
SHROOM4-201ENST00000289292 PLEKHO2Q8TD55 490 aa15.11■□□□□ 0.01
SHROOM4-201ENST00000289292 AHCYL2Q96HN2 611 aaKnown RBP15.11■□□□□ 0.01
SHROOM4-201ENST00000289292 MTRRQ9UBK8 725 aa15.11■□□□□ 0.01
SHROOM4-201ENST00000289292 XRN1Q8IZH2 1706 aaKnown RBP15.11■□□□□ 0.01
SHROOM4-201ENST00000289292 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.1■□□□□ 0.01
SHROOM4-201ENST00000289292 DLX3O60479 287 aa15.1■□□□□ 0.01
SHROOM4-201ENST00000289292 MAPK8P45983 427 aa15.1■□□□□ 0.01
SHROOM4-201ENST00000289292 UFM1P61960 85 aa15.1■□□□□ 0.01
SHROOM4-201ENST00000289292 SCRN3Q0VDG4 424 aa15.1■□□□□ 0.01
SHROOM4-201ENST00000289292 CRTC2Q53ET0 693 aaPredicted RBP15.1■□□□□ 0.01
SHROOM4-201ENST00000289292 FAM129CQ86XR2 697 aa15.1■□□□□ 0.01
SHROOM4-201ENST00000289292 TREML1Q86YW5 311 aa15.1■□□□□ 0.01
SHROOM4-201ENST00000289292 RNF38Q9H0F5 515 aa15.1■□□□□ 0.01
SHROOM4-201ENST00000289292 IRF2BPLQ9H1B7 796 aa15.1■□□□□ 0.01
SHROOM4-201ENST00000289292 FAM234BA2RU67 622 aa15.1■□□□□ 0.01
SHROOM4-201ENST00000289292 A8MV72 311 aaPredicted RBP15.1■□□□□ 0.01
SHROOM4-201ENST00000289292 GADD45GO95257 159 aa15.1■□□□□ 0.01
SHROOM4-201ENST00000289292 AOC1P19801 751 aa15.1■□□□□ 0.01
SHROOM4-201ENST00000289292 SRSF11Q05519 484 aaKnown RBP15.1■□□□□ 0.01
SHROOM4-201ENST00000289292 RBM20Q5T481 1227 aaKnown RBP15.1■□□□□ 0.01
SHROOM4-201ENST00000289292 ZZZ3Q8IYH5 903 aa15.1■□□□□ 0.01
SHROOM4-201ENST00000289292 SLC43A3Q8NBI5 491 aa15.1■□□□□ 0.01
SHROOM4-201ENST00000289292 STON2Q8WXE9 905 aa15.1■□□□□ 0.01
SHROOM4-201ENST00000289292 SLC9A6Q92581 669 aa15.1■□□□□ 0.01
SHROOM4-201ENST00000289292 HNRNPABQ99729 332 aaKnown RBP15.1■□□□□ 0.01
SHROOM4-201ENST00000289292 WRAP53Q9BUR4 548 aaKnown RBP15.1■□□□□ 0.01
SHROOM4-201ENST00000289292 ABCC6O95255 1503 aa15.1■□□□□ 0.01
SHROOM4-201ENST00000289292 TCAF2A6NFQ2 919 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms