RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 FAM129CQ86XR2 697 aa24.53■■□□□ 1.52
PDF-201ENST00000288022 ZFPM2Q8WW38 1151 aa24.53■■□□□ 1.52
PDF-201ENST00000288022 STAMBPL1Q96FJ0 436 aa24.53■■□□□ 1.52
PDF-201ENST00000288022 NAF1Q96HR8 494 aaKnown RBP24.53■■□□□ 1.52
PDF-201ENST00000288022 SIGLEC10Q96LC7 697 aa24.53■■□□□ 1.52
PDF-201ENST00000288022 C16orf45Q96MC5 204 aaPredicted RBP24.53■■□□□ 1.52
PDF-201ENST00000288022 FCRL3Q96P31 734 aaPredicted RBP24.53■■□□□ 1.52
PDF-201ENST00000288022 TRIM31Q9BZY9 425 aa24.53■■□□□ 1.52
PDF-201ENST00000288022 KIR3DX1Q9H7L2 352 aa24.53■■□□□ 1.52
PDF-201ENST00000288022 IL1RAPL1Q9NZN1 696 aa24.53■■□□□ 1.52
PDF-201ENST00000288022 SLC24A2Q9UI40 661 aa24.53■■□□□ 1.52
PDF-201ENST00000288022 GNPTGQ9UJJ9 305 aa24.53■■□□□ 1.52
PDF-201ENST00000288022 PIKFYVEQ9Y2I7 2098 aa24.53■■□□□ 1.52
PDF-201ENST00000288022 MN1Q10571 1320 aaPredicted RBP24.53■■□□□ 1.52
PDF-201ENST00000288022 IQCF5A8MTL0 148 aa24.52■■□□□ 1.52
PDF-201ENST00000288022 IVDP26440 423 aa24.52■■□□□ 1.52
PDF-201ENST00000288022 SLC5A2P31639 672 aa24.52■■□□□ 1.52
PDF-201ENST00000288022 ARCN1P48444 511 aaKnown RBP24.52■■□□□ 1.52
PDF-201ENST00000288022 EIF3BP55884 814 aaKnown RBP24.52■■□□□ 1.52
PDF-201ENST00000288022 THOC5Q13769 683 aaKnown RBP24.52■■□□□ 1.52
PDF-201ENST00000288022 DNAJC21Q5F1R6 531 aaKnown RBP24.52■■□□□ 1.52
PDF-201ENST00000288022 RNF187Q5TA31 235 aaPredicted RBP24.52■■□□□ 1.52
PDF-201ENST00000288022 NEPROQ6NW34 567 aa24.52■■□□□ 1.52
PDF-201ENST00000288022 CLEC14AQ86T13 490 aa24.52■■□□□ 1.52
PDF-201ENST00000288022 TMEM135Q86UB9 458 aa24.52■■□□□ 1.52
PDF-201ENST00000288022 KRT222Q8N1A0 295 aa24.52■■□□□ 1.52
PDF-201ENST00000288022 AGGF1Q8N302 714 aaeCLIP24.52■■□□□ 1.52
PDF-201ENST00000288022 ZNF248Q8NDW4 579 aa24.52■■□□□ 1.52
PDF-201ENST00000288022 PHC3Q8NDX5 983 aa24.52■■□□□ 1.52
PDF-201ENST00000288022 TFGQ92734 400 aaPredicted RBP24.52■■□□□ 1.52
PDF-201ENST00000288022 ZDHHC12Q96GR4 267 aa24.52■■□□□ 1.52
PDF-201ENST00000288022 CARD6Q9BX69 1037 aa24.52■■□□□ 1.52
PDF-201ENST00000288022 EFCAB7A8K855 629 aa24.51■■□□□ 1.51
PDF-201ENST00000288022 RASSF9O75901 435 aa24.51■■□□□ 1.51
PDF-201ENST00000288022 USP1O94782 785 aa24.51■■□□□ 1.51
PDF-201ENST00000288022 C9P02748 559 aa24.51■■□□□ 1.51
PDF-201ENST00000288022 OGNP20774 298 aaKnown RBP24.51■■□□□ 1.51
PDF-201ENST00000288022 LEPRP48357 1165 aaKnown RBP24.51■■□□□ 1.51
PDF-201ENST00000288022 PLOD1Q02809 727 aaPredicted RBP24.51■■□□□ 1.51
PDF-201ENST00000288022 ARHGAP22Q7Z5H3 698 aa24.51■■□□□ 1.51
PDF-201ENST00000288022 LRRC6Q86X45 466 aa24.51■■□□□ 1.51
PDF-201ENST00000288022 SPATA4Q8NEY3 305 aa24.51■■□□□ 1.51
PDF-201ENST00000288022 LKAAEAR1Q8TD35 194 aa24.51■■□□□ 1.51
PDF-201ENST00000288022 USP7Q93009 1102 aa24.51■■□□□ 1.51
PDF-201ENST00000288022 SNF8Q96H20 258 aa24.51■■□□□ 1.51
PDF-201ENST00000288022 C9orf72Q96LT7 481 aa24.51■■□□□ 1.51
PDF-201ENST00000288022 TCF12Q99081 682 aa24.51■■□□□ 1.51
PDF-201ENST00000288022 P2RY12Q9H244 342 aa24.51■■□□□ 1.51
PDF-201ENST00000288022 USP24Q9UPU5 2620 aa24.5■■□□□ 1.51
PDF-201ENST00000288022 SLC5A10A0PJK1 596 aa24.5■■□□□ 1.51
PDF-201ENST00000288022 EFCAB8A8MWE9 144 aa24.5■■□□□ 1.51
PDF-201ENST00000288022 APOA4P06727 396 aa24.5■■□□□ 1.51
PDF-201ENST00000288022 RPS3P23396 243 aaKnown RBP eCLIP24.5■■□□□ 1.513e-8■■□□□ 12
PDF-201ENST00000288022 CCR7P32248 378 aa24.5■■□□□ 1.51
PDF-201ENST00000288022 DHX9Q08211 1270 aaKnown RBP24.5■■□□□ 1.51
PDF-201ENST00000288022 C2orf54Q08AI8 447 aa24.5■■□□□ 1.51
PDF-201ENST00000288022 HSPA14Q0VDF9 509 aa24.5■■□□□ 1.51
PDF-201ENST00000288022 MORF4L2Q15014 288 aa24.5■■□□□ 1.51
PDF-201ENST00000288022 TMED2Q15363 201 aa24.5■■□□□ 1.51
PDF-201ENST00000288022 LONRF1Q17RB8 773 aa24.5■■□□□ 1.51
PDF-201ENST00000288022 TYSND1Q2T9J0 566 aa24.5■■□□□ 1.51
PDF-201ENST00000288022 BBS9Q3SYG4 887 aa24.5■■□□□ 1.51
PDF-201ENST00000288022 TMEM164Q5U3C3 297 aa24.5■■□□□ 1.51
PDF-201ENST00000288022 ARMC6Q6NXE6 501 aa24.5■■□□□ 1.51
PDF-201ENST00000288022 FAM92BQ6ZTR7 304 aa24.5■■□□□ 1.51
PDF-201ENST00000288022 ACVR1CQ8NER5 493 aa24.5■■□□□ 1.51
PDF-201ENST00000288022 HNRNPLLQ8WVV9 542 aaKnown RBP24.5■■□□□ 1.51
PDF-201ENST00000288022 PANX3Q96QZ0 392 aa24.5■■□□□ 1.51
PDF-201ENST00000288022 MVB12BQ9H7P6 319 aa24.5■■□□□ 1.51
PDF-201ENST00000288022 C20orf96Q9NUD7 363 aaPredicted RBP24.5■■□□□ 1.51
PDF-201ENST00000288022 OCIAD1Q9NX40 245 aa24.5■■□□□ 1.51
PDF-201ENST00000288022 PCDHGA7Q9Y5G6 932 aa24.5■■□□□ 1.51
PDF-201ENST00000288022 A0A087WV48 116 aa24.49■■□□□ 1.51
PDF-201ENST00000288022 ZCWPW2A0A1B0GU75 182 aa24.49■■□□□ 1.51
PDF-201ENST00000288022 PRAMEF10O60809 474 aa24.49■■□□□ 1.51
PDF-201ENST00000288022 BANF1O75531 89 aa24.49■■□□□ 1.51
PDF-201ENST00000288022 FGF3P11487 239 aaPredicted RBP24.49■■□□□ 1.51
PDF-201ENST00000288022 PGAM1P18669 254 aa24.49■■□□□ 1.51
PDF-201ENST00000288022 FMO4P31512 558 aa24.49■■□□□ 1.51
PDF-201ENST00000288022 ITGA8P53708 1063 aa24.49■■□□□ 1.51
PDF-201ENST00000288022 MRPS25P82663 173 aaKnown RBP24.49■■□□□ 1.51
PDF-201ENST00000288022 ZNF470Q6ECI4 717 aa24.49■■□□□ 1.51
PDF-201ENST00000288022 OOSP2Q86WS3 158 aa24.49■■□□□ 1.51
PDF-201ENST00000288022 OR4E2Q8NGC2 313 aa24.49■■□□□ 1.51
PDF-201ENST00000288022 KCNE4Q8WWG9 221 aa24.49■■□□□ 1.51
PDF-201ENST00000288022 ASZ1Q8WWH4 475 aa24.49■■□□□ 1.51
PDF-201ENST00000288022 LCN9Q8WX39 176 aa24.49■■□□□ 1.51
PDF-201ENST00000288022 ART4Q93070 314 aa24.49■■□□□ 1.51
PDF-201ENST00000288022 HGH1Q9BTY7 390 aa24.49■■□□□ 1.51
PDF-201ENST00000288022 WDR70Q9NW82 654 aa24.49■■□□□ 1.51
PDF-201ENST00000288022 HRASLS2Q9NWW9 162 aa24.49■■□□□ 1.51
PDF-201ENST00000288022 SLC39A1Q9NY26 324 aa24.49■■□□□ 1.51
PDF-201ENST00000288022 ASF1AQ9Y294 204 aa24.49■■□□□ 1.51
PDF-201ENST00000288022 CRYL1Q9Y2S2 319 aa24.49■■□□□ 1.51
PDF-201ENST00000288022 FREM2Q5SZK8 3169 aa24.48■■□□□ 1.51
PDF-201ENST00000288022 WDFY3Q8IZQ1 3526 aa24.48■■□□□ 1.51
PDF-201ENST00000288022 OR6C74A6NCV1 312 aa24.48■■□□□ 1.51
PDF-201ENST00000288022 OR5K3A6NET4 321 aa24.48■■□□□ 1.51
PDF-201ENST00000288022 BHMG1C9JSJ3 638 aaPredicted RBP24.48■■□□□ 1.51
PDF-201ENST00000288022 SMAPO00193 183 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms