RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 RIMKLBQ9ULI2 386 aa14.07□□□□□ -0.16
HMGN3-201ENST00000275036 TMEM184BQ9Y519 407 aaPredicted RBP14.07□□□□□ -0.16
HMGN3-201ENST00000275036 SEC16AO15027 2179 aa14.07□□□□□ -0.16
HMGN3-201ENST00000275036 TLN1Q9Y490 2541 aaKnown RBP14.06□□□□□ -0.16
HMGN3-201ENST00000275036 IGHV5-51A0A0C4DH38 117 aa14.06□□□□□ -0.16
HMGN3-201ENST00000275036 TCRBV7S3A2A0A539 114 aa14.06□□□□□ -0.16
HMGN3-201ENST00000275036 POLR1CO15160 346 aaPredicted RBP14.06□□□□□ -0.16
HMGN3-201ENST00000275036 OR1I1O60431 355 aa14.06□□□□□ -0.16
HMGN3-201ENST00000275036 RASSF9O75901 435 aa14.06□□□□□ -0.16
HMGN3-201ENST00000275036 STK17BO94768 372 aa14.06□□□□□ -0.16
HMGN3-201ENST00000275036 GAS8O95995 478 aa14.06□□□□□ -0.16
HMGN3-201ENST00000275036 ITGB2P05107 769 aa14.06□□□□□ -0.16
HMGN3-201ENST00000275036 FAM87AP0C7U9 286 aa14.06□□□□□ -0.16
HMGN3-201ENST00000275036 NSG1P42857 185 aa14.06□□□□□ -0.16
HMGN3-201ENST00000275036 ATP1A2P50993 1020 aa14.06□□□□□ -0.16
HMGN3-201ENST00000275036 SESN2P58004 480 aaPredicted RBP14.06□□□□□ -0.16
HMGN3-201ENST00000275036 BASP1P80723 227 aaKnown RBP14.06□□□□□ -0.16
HMGN3-201ENST00000275036 ITIH4Q14624 930 aa14.06□□□□□ -0.16
HMGN3-201ENST00000275036 GSE1Q14687 1217 aa14.06□□□□□ -0.16
HMGN3-201ENST00000275036 PLCL1Q15111 1095 aa14.06□□□□□ -0.16
HMGN3-201ENST00000275036 TTC27Q6P3X3 843 aa14.06□□□□□ -0.16
HMGN3-201ENST00000275036 CEACAM20Q6UY09 585 aa14.06□□□□□ -0.16
HMGN3-201ENST00000275036 PACS1Q6VY07 963 aa14.06□□□□□ -0.16
HMGN3-201ENST00000275036 CERS6Q6ZMG9 384 aa14.06□□□□□ -0.16
HMGN3-201ENST00000275036 GSTA5Q7RTV2 222 aa14.06□□□□□ -0.16
HMGN3-201ENST00000275036 ZDHHC12Q96GR4 267 aa14.06□□□□□ -0.16
HMGN3-201ENST00000275036 CHRAC1Q9NRG0 131 aa14.06□□□□□ -0.16
HMGN3-201ENST00000275036 SEMA5BQ9P283 1151 aa14.06□□□□□ -0.16
HMGN3-201ENST00000275036 JRKLQ9Y4A0 524 aa14.06□□□□□ -0.16
HMGN3-201ENST00000275036 TENM4Q6N022 2769 aa14.05□□□□□ -0.16
HMGN3-201ENST00000275036 OR5K3A6NET4 321 aa14.05□□□□□ -0.16
HMGN3-201ENST00000275036 GOLGA6L3A6NEY3 463 aa14.05□□□□□ -0.16
HMGN3-201ENST00000275036 AP2A2O94973 939 aa14.05□□□□□ -0.16
HMGN3-201ENST00000275036 ITGB6P18564 788 aa14.05□□□□□ -0.16
HMGN3-201ENST00000275036 ARCN1P48444 511 aaKnown RBP14.05□□□□□ -0.16
HMGN3-201ENST00000275036 FOXM1Q08050 763 aa14.05□□□□□ -0.16
HMGN3-201ENST00000275036 TRIP13Q15645 432 aaPredicted RBP14.05□□□□□ -0.16
HMGN3-201ENST00000275036 AFTPHQ6ULP2 937 aa14.05□□□□□ -0.16
HMGN3-201ENST00000275036 NAPRTQ6XQN6 538 aa14.05□□□□□ -0.16
HMGN3-201ENST00000275036 NLGN4XQ8N0W4 816 aa14.05□□□□□ -0.16
HMGN3-201ENST00000275036 SLC35F6Q8N357 371 aa14.05□□□□□ -0.16
HMGN3-201ENST00000275036 PHC3Q8NDX5 983 aa14.05□□□□□ -0.16
HMGN3-201ENST00000275036 NLGN4YQ8NFZ3 816 aaPredicted RBP14.05□□□□□ -0.16
HMGN3-201ENST00000275036 ZFPM2Q8WW38 1151 aa14.05□□□□□ -0.16
HMGN3-201ENST00000275036 PPM1MQ96MI6 270 aa14.05□□□□□ -0.16
HMGN3-201ENST00000275036 OR6C1Q96RD1 312 aa14.05□□□□□ -0.16
HMGN3-201ENST00000275036 MAP3K3Q99759 626 aa14.05□□□□□ -0.16
HMGN3-201ENST00000275036 ZPBPQ9BS86 351 aa14.05□□□□□ -0.16
HMGN3-201ENST00000275036 HRASLS2Q9NWW9 162 aa14.05□□□□□ -0.16
HMGN3-201ENST00000275036 MARCH4Q9P2E8 410 aaPredicted RBP14.05□□□□□ -0.16
HMGN3-201ENST00000275036 IL17BQ9UHF5 180 aa14.05□□□□□ -0.16
HMGN3-201ENST00000275036 TTC7AQ9ULT0 858 aaPredicted RBP14.05□□□□□ -0.16
HMGN3-201ENST00000275036 SPENQ96T58 3664 aaKnown RBP14.04□□□□□ -0.16
HMGN3-201ENST00000275036 OR6C74A6NCV1 312 aa14.04□□□□□ -0.16
HMGN3-201ENST00000275036 ZIC2O95409 532 aaPredicted RBP14.04□□□□□ -0.16
HMGN3-201ENST00000275036 TIAF1O95411 115 aa14.04□□□□□ -0.16
HMGN3-201ENST00000275036 NELFEP18615 380 aaKnown RBP14.04□□□□□ -0.16
HMGN3-201ENST00000275036 F8A1P23610 371 aa14.04□□□□□ -0.16
HMGN3-201ENST00000275036 TERF1P54274 439 aa14.04□□□□□ -0.16
HMGN3-201ENST00000275036 LAMB3Q13751 1172 aa14.04□□□□□ -0.16
HMGN3-201ENST00000275036 KCNAB1Q14722 419 aa14.04□□□□□ -0.16
HMGN3-201ENST00000275036 PCID2Q5JVF3 399 aa14.04□□□□□ -0.16
HMGN3-201ENST00000275036 C4orf22Q6V702 233 aa14.04□□□□□ -0.16
HMGN3-201ENST00000275036 NLRP9Q7RTR0 991 aa14.04□□□□□ -0.16
HMGN3-201ENST00000275036 ZNF605Q86T29 641 aa14.04□□□□□ -0.16
HMGN3-201ENST00000275036 LDB1Q86U70 411 aaPredicted RBP14.04□□□□□ -0.16
HMGN3-201ENST00000275036 PPHLN1Q8NEY8 458 aaKnown RBP14.04□□□□□ -0.16
HMGN3-201ENST00000275036 OR4E2Q8NGC2 313 aa14.04□□□□□ -0.16
HMGN3-201ENST00000275036 OR6P1Q8NGX9 317 aa14.04□□□□□ -0.16
HMGN3-201ENST00000275036 OR4L1Q8NH43 312 aa14.04□□□□□ -0.16
HMGN3-201ENST00000275036 COG1Q8WTW3 980 aa14.04□□□□□ -0.16
HMGN3-201ENST00000275036 PEX13Q92968 403 aa14.04□□□□□ -0.16
HMGN3-201ENST00000275036 ELMO2Q96JJ3 720 aa14.04□□□□□ -0.16
HMGN3-201ENST00000275036 SLC41A2Q96JW4 573 aa14.04□□□□□ -0.16
HMGN3-201ENST00000275036 FERD3LQ96RJ6 166 aa14.04□□□□□ -0.16
HMGN3-201ENST00000275036 AP1M1Q9BXS5 423 aa14.04□□□□□ -0.16
HMGN3-201ENST00000275036 VPS37BQ9H9H4 285 aa14.04□□□□□ -0.16
HMGN3-201ENST00000275036 HOMER3Q9NSC5 361 aa14.04□□□□□ -0.16
HMGN3-201ENST00000275036 TREX1Q9NSU2 369 aa14.04□□□□□ -0.16
HMGN3-201ENST00000275036 MRPS18BQ9Y676 258 aaKnown RBP14.04□□□□□ -0.16
HMGN3-201ENST00000275036 COLEC10Q9Y6Z7 277 aa14.04□□□□□ -0.16
HMGN3-201ENST00000275036 SLC5A10A0PJK1 596 aa14.03□□□□□ -0.16
HMGN3-201ENST00000275036 TLCD2A6NGC4 264 aa14.03□□□□□ -0.16
HMGN3-201ENST00000275036 B8ZZF3 427 aa14.03□□□□□ -0.16
HMGN3-201ENST00000275036 PYCARD-AS1I3L0S3 204 aa14.03□□□□□ -0.16
HMGN3-201ENST00000275036 NKX2-8O15522 239 aa14.03□□□□□ -0.16
HMGN3-201ENST00000275036 FOLR1P15328 257 aa14.03□□□□□ -0.16
HMGN3-201ENST00000275036 POLR2CP19387 275 aaPredicted RBP14.03□□□□□ -0.16
HMGN3-201ENST00000275036 TPSB2P20231 275 aa14.03□□□□□ -0.16
HMGN3-201ENST00000275036 MGAT1P26572 445 aa14.03□□□□□ -0.16
HMGN3-201ENST00000275036 MAP4P27816 1152 aaKnown RBP14.03□□□□□ -0.16
HMGN3-201ENST00000275036 NDUFS1P28331 727 aa14.03□□□□□ -0.16
HMGN3-201ENST00000275036 NMBRP28336 390 aa14.03□□□□□ -0.16
HMGN3-201ENST00000275036 STAT5AP42229 794 aa14.03□□□□□ -0.16
HMGN3-201ENST00000275036 CD151P48509 253 aa14.03□□□□□ -0.16
HMGN3-201ENST00000275036 VPS41P49754 854 aa14.03□□□□□ -0.16
HMGN3-201ENST00000275036 KPNA2P52292 529 aaKnown RBP14.03□□□□□ -0.16
HMGN3-201ENST00000275036 PRAMEP78395 509 aa14.03□□□□□ -0.16
HMGN3-201ENST00000275036 NFKB2Q00653 900 aa14.03□□□□□ -0.16
HMGN3-201ENST00000275036 RPA4Q13156 261 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms