RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 DPP10Q8N608 796 aa11.39□□□□□ -0.59
VPS33A-201ENST00000267199 GRIN3AQ8TCU5 1115 aa11.39□□□□□ -0.59
VPS33A-201ENST00000267199 BRSK1Q8TDC3 778 aa11.39□□□□□ -0.59
VPS33A-201ENST00000267199 OSBPL2Q9H1P3 480 aa11.39□□□□□ -0.59
VPS33A-201ENST00000267199 CRTAC1Q9NQ79 661 aa11.39□□□□□ -0.59
VPS33A-201ENST00000267199 PTGFRNQ9P2B2 879 aa11.39□□□□□ -0.59
VPS33A-201ENST00000267199 CARD8Q9Y2G2 431 aa11.39□□□□□ -0.59
VPS33A-201ENST00000267199 ARL5AQ9Y689 179 aa11.39□□□□□ -0.59
VPS33A-201ENST00000267199 ANKDD1BA6NHY2 528 aa11.39□□□□□ -0.59
VPS33A-201ENST00000267199 ZNF487B1APH4 448 aa11.39□□□□□ -0.59
VPS33A-201ENST00000267199 BEST1O76090 585 aa11.39□□□□□ -0.59
VPS33A-201ENST00000267199 CATP04040 527 aaKnown RBP11.39□□□□□ -0.59
VPS33A-201ENST00000267199 TFAP2AP05549 437 aa11.39□□□□□ -0.59
VPS33A-201ENST00000267199 ITPKAP23677 461 aa11.39□□□□□ -0.59
VPS33A-201ENST00000267199 DIO3P55073 304 aa11.39□□□□□ -0.59
VPS33A-201ENST00000267199 PAQR3Q6TCH7 311 aa11.39□□□□□ -0.59
VPS33A-201ENST00000267199 USP45Q70EL2 814 aa11.39□□□□□ -0.59
VPS33A-201ENST00000267199 ZNF671Q8TAW3 534 aa11.39□□□□□ -0.59
VPS33A-201ENST00000267199 GTPBP3Q969Y2 492 aaKnown RBP11.39□□□□□ -0.59
VPS33A-201ENST00000267199 EHD1Q9H4M9 534 aa11.39□□□□□ -0.59
VPS33A-201ENST00000267199 MOV10Q9HCE1 1003 aaKnown RBP11.39□□□□□ -0.59
VPS33A-201ENST00000267199 SNTG1Q9NSN8 517 aa11.39□□□□□ -0.59
VPS33A-201ENST00000267199 FKBPLQ9UIM3 349 aa11.39□□□□□ -0.59
VPS33A-201ENST00000267199 CAPN14A8MX76 684 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 PIRO00625 290 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 XYLBO75191 536 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 FABP3P05413 133 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 IQCF3P0C7M6 154 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 PRKAR2AP13861 404 aaKnown RBP11.38□□□□□ -0.59
VPS33A-201ENST00000267199 PSMA1P25786 263 aaKnown RBP11.38□□□□□ -0.59
VPS33A-201ENST00000267199 RAB25P57735 213 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 HMGCS1Q01581 520 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 BTG3Q14201 252 aaPredicted RBP11.38□□□□□ -0.59
VPS33A-201ENST00000267199 ZNF544Q6NX49 715 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 IZUMO1Q8IYV9 350 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 TBC1D19Q8N5T2 526 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 COPS8Q99627 209 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 MKS1Q9NXB0 559 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 GALPQ9UBC7 116 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 PEX16Q9Y5Y5 336 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 A0A1W2PQ72 361 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 FUOMA2VDF0 154 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 PRORSD1PA6NEY8 169 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 J3KR12 359 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 NDUFB5O43674 189 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 DUSP11O75319 330 aaKnown RBP11.38□□□□□ -0.59
VPS33A-201ENST00000267199 SLC25A14O95258 325 aaPredicted RBP11.38□□□□□ -0.59
VPS33A-201ENST00000267199 ASGR1P07306 291 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 ENO2P09104 434 aaPredicted RBP11.38□□□□□ -0.59
VPS33A-201ENST00000267199 NR2F6P10588 404 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 PRKAR1AP10644 381 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 RXRGP48443 463 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 CENPAP49450 140 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 CASP9P55211 416 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 GHRHRQ02643 423 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 IL10RBQ08334 325 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 LIX1Q8N485 282 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 SLC15A4Q8N697 577 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 ZNF778Q96MU6 729 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 ATP13A3Q9H7F0 1226 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 TMEM9Q9P0T7 183 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 ING4Q9UNL4 249 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 ADAMTS7Q9UKP4 1686 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 COL2A1P02458 1487 aaPredicted RBP11.38□□□□□ -0.59
VPS33A-201ENST00000267199 TNFRSF11BO00300 401 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 ABCB7O75027 752 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 SCELO95171 688 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 C9P02748 559 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 PRKCGP05129 697 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 CDH1P12830 882 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 NOS3P29474 1203 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 DGKEP52429 567 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 HERVK_113P63132 956 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 RELAQ04206 551 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 PMS2P3Q13401 168 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 TIGD6Q17RP2 521 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 C11orf91Q3C1V1 193 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 DEF8Q6ZN54 512 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 SLC24A5Q71RS6 500 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 HID1Q8IV36 788 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 ERVK-6Q9BXR3 956 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 PTGDR2Q9Y5Y4 395 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 MYH9P35579 1960 aaKnown RBP11.38□□□□□ -0.59
VPS33A-201ENST00000267199 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.38□□□□□ -0.59
VPS33A-201ENST00000267199 KPNA3O00505 521 aaPredicted RBP11.38□□□□□ -0.59
VPS33A-201ENST00000267199 PROZP22891 400 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 SLC5A2P31639 672 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 HNF4AP41235 474 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 ARSFP54793 590 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 SCN1BQ07699 218 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 IL18Q14116 193 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 CCL14Q16627 93 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 XKR6Q5GH73 641 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 RBM48Q5RL73 367 aaKnown RBP11.38□□□□□ -0.59
VPS33A-201ENST00000267199 VARS2Q5ST30 1063 aaKnown RBP11.38□□□□□ -0.59
VPS33A-201ENST00000267199 ZNF420Q8TAQ5 688 aaPredicted RBP11.38□□□□□ -0.59
VPS33A-201ENST00000267199 RPL10LQ96L21 214 aaKnown RBP11.38□□□□□ -0.59
VPS33A-201ENST00000267199 C16orf70Q9BSU1 422 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 SACM1LQ9NTJ5 587 aa11.38□□□□□ -0.59
VPS33A-201ENST00000267199 TMED5Q9Y3A6 229 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 156.5 ms