RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 OXA1LQ15070 435 aa17.18■□□□□ 0.34
TRAM1-201ENST00000262213 MAPRE1Q15691 268 aaKnown RBP17.18■□□□□ 0.34
TRAM1-201ENST00000262213 FRA10AC1Q70Z53 315 aa17.18■□□□□ 0.34
TRAM1-201ENST00000262213 TAS2R42Q7RTR8 314 aa17.18■□□□□ 0.34
TRAM1-201ENST00000262213 DPP10Q8N608 796 aa17.18■□□□□ 0.34
TRAM1-201ENST00000262213 TTC9BQ8N6N2 239 aa17.18■□□□□ 0.34
TRAM1-201ENST00000262213 OR7D4Q8NG98 312 aa17.18■□□□□ 0.34
TRAM1-201ENST00000262213 ERVK-18Q9QC07 812 aa17.18■□□□□ 0.34
TRAM1-201ENST00000262213 B3GNT3Q9Y2A9 372 aa17.18■□□□□ 0.34
TRAM1-201ENST00000262213 GIT1Q9Y2X7 761 aa17.18■□□□□ 0.34
TRAM1-201ENST00000262213 SLC12A8A0AV02 714 aa17.18■□□□□ 0.34
TRAM1-201ENST00000262213 NDST3O95803 873 aa17.18■□□□□ 0.34
TRAM1-201ENST00000262213 TSPAN12O95859 305 aa17.18■□□□□ 0.34
TRAM1-201ENST00000262213 PKMP14618 531 aaKnown RBP17.18■□□□□ 0.34
TRAM1-201ENST00000262213 CYP4F3Q08477 520 aa17.18■□□□□ 0.34
TRAM1-201ENST00000262213 SIM2Q14190 667 aaPredicted RBP17.18■□□□□ 0.34
TRAM1-201ENST00000262213 BTG3Q14201 252 aaPredicted RBP17.18■□□□□ 0.34
TRAM1-201ENST00000262213 CARTPTQ16568 116 aa17.18■□□□□ 0.34
TRAM1-201ENST00000262213 C10orf120Q5SQS8 335 aa17.18■□□□□ 0.34
TRAM1-201ENST00000262213 TXNDC11Q6PKC3 985 aa17.18■□□□□ 0.34
TRAM1-201ENST00000262213 DSG4Q86SJ6 1040 aa17.18■□□□□ 0.34
TRAM1-201ENST00000262213 CADM3Q8N126 398 aa17.18■□□□□ 0.34
TRAM1-201ENST00000262213 ATP6V0D2Q8N8Y2 350 aa17.18■□□□□ 0.34
TRAM1-201ENST00000262213 LPCAT1Q8NF37 534 aa17.18■□□□□ 0.34
TRAM1-201ENST00000262213 TADA1Q96BN2 335 aa17.18■□□□□ 0.34
TRAM1-201ENST00000262213 ALOXE3Q9BYJ1 711 aa17.18■□□□□ 0.34
TRAM1-201ENST00000262213 ZNF232Q9UNY5 417 aa17.18■□□□□ 0.34
TRAM1-201ENST00000262213 ZNF99A8MXY4 864 aaPredicted RBP17.17■□□□□ 0.34
TRAM1-201ENST00000262213 MGEA5O60502 916 aa17.17■□□□□ 0.34
TRAM1-201ENST00000262213 CD52P31358 61 aa17.17■□□□□ 0.34
TRAM1-201ENST00000262213 PPP2R2BQ00005 443 aa17.17■□□□□ 0.34
TRAM1-201ENST00000262213 HMGCS1Q01581 520 aa17.17■□□□□ 0.34
TRAM1-201ENST00000262213 EMX1Q04741 257 aaPredicted RBP17.17■□□□□ 0.34
TRAM1-201ENST00000262213 INAQ16352 499 aa17.17■□□□□ 0.34
TRAM1-201ENST00000262213 FXNQ16595 210 aa17.17■□□□□ 0.34
TRAM1-201ENST00000262213 MILR1Q7Z6M3 343 aa17.17■□□□□ 0.34
TRAM1-201ENST00000262213 ADCK1Q86TW2 530 aa17.17■□□□□ 0.34
TRAM1-201ENST00000262213 KRTCAP2Q8N6L1 136 aa17.17■□□□□ 0.34
TRAM1-201ENST00000262213 MCOLN3Q8TDD5 553 aa17.17■□□□□ 0.34
TRAM1-201ENST00000262213 GIPC2Q8TF65 315 aa17.17■□□□□ 0.34
TRAM1-201ENST00000262213 RHNO1Q9BSD3 238 aa17.17■□□□□ 0.34
TRAM1-201ENST00000262213 NLE1Q9NVX2 485 aaPredicted RBP17.17■□□□□ 0.34
TRAM1-201ENST00000262213 FBXO10Q9UK96 956 aa17.17■□□□□ 0.34
TRAM1-201ENST00000262213 PNMA8BQ9ULN7 279 aaPredicted RBP17.17■□□□□ 0.34
TRAM1-201ENST00000262213 DYTNA2CJ06 578 aa17.17■□□□□ 0.34
TRAM1-201ENST00000262213 CXCR6O00574 342 aa17.17■□□□□ 0.34
TRAM1-201ENST00000262213 MC4RP32245 332 aa17.17■□□□□ 0.34
TRAM1-201ENST00000262213 HOXD12P35452 270 aa17.17■□□□□ 0.34
TRAM1-201ENST00000262213 TGFBR1P36897 503 aa17.17■□□□□ 0.34
TRAM1-201ENST00000262213 ZNF140P52738 457 aaPredicted RBP17.17■□□□□ 0.34
TRAM1-201ENST00000262213 ARPP19P56211 112 aa17.17■□□□□ 0.34
TRAM1-201ENST00000262213 CTSL3PQ5NE16 218 aa17.17■□□□□ 0.34
TRAM1-201ENST00000262213 TMEM53Q6P2H8 277 aa17.17■□□□□ 0.34
TRAM1-201ENST00000262213 AFTPHQ6ULP2 937 aa17.17■□□□□ 0.34
TRAM1-201ENST00000262213 DET1Q7L5Y6 550 aa17.17■□□□□ 0.34
TRAM1-201ENST00000262213 MON1AQ86VX9 555 aa17.17■□□□□ 0.34
TRAM1-201ENST00000262213 SLC13A3Q8WWT9 602 aa17.17■□□□□ 0.34
TRAM1-201ENST00000262213 SLC35B4Q969S0 331 aa17.17■□□□□ 0.34
TRAM1-201ENST00000262213 RBM4BQ9BQ04 359 aaKnown RBP17.17■□□□□ 0.34
TRAM1-201ENST00000262213 RBM4Q9BWF3 364 aaKnown RBP17.17■□□□□ 0.34
TRAM1-201ENST00000262213 KLHL25Q9H0H3 589 aa17.17■□□□□ 0.34
TRAM1-201ENST00000262213 NEUROG3Q9Y4Z2 214 aa17.17■□□□□ 0.34
TRAM1-201ENST00000262213 TRPV2Q9Y5S1 764 aa17.17■□□□□ 0.34
TRAM1-201ENST00000262213 LSM1O15116 133 aaKnown RBP17.17■□□□□ 0.34
TRAM1-201ENST00000262213 CNOT3O75175 753 aaKnown RBP17.17■□□□□ 0.34
TRAM1-201ENST00000262213 UGT2B11O75310 529 aa17.17■□□□□ 0.34
TRAM1-201ENST00000262213 HPRP00739 348 aa17.17■□□□□ 0.34
TRAM1-201ENST00000262213 CHRNA1P02708 482 aa17.17■□□□□ 0.34
TRAM1-201ENST00000262213 GSNP06396 782 aa17.17■□□□□ 0.34
TRAM1-201ENST00000262213 PSMB9P28065 219 aa17.17■□□□□ 0.34
TRAM1-201ENST00000262213 CPT1AP50416 773 aa17.17■□□□□ 0.34
TRAM1-201ENST00000262213 ISL1P61371 349 aa17.17■□□□□ 0.34
TRAM1-201ENST00000262213 RAPSNQ13702 412 aa17.17■□□□□ 0.34
TRAM1-201ENST00000262213 MAPKAPK3Q16644 382 aa17.17■□□□□ 0.34
TRAM1-201ENST00000262213 ADPRMQ3LIE5 342 aa17.17■□□□□ 0.34
TRAM1-201ENST00000262213 SPANXN4Q5MJ08 99 aa17.17■□□□□ 0.34
TRAM1-201ENST00000262213 GOLGA7Q7Z5G4 137 aa17.17■□□□□ 0.34
TRAM1-201ENST00000262213 CD200R1Q8TD46 325 aa17.17■□□□□ 0.34
TRAM1-201ENST00000262213 BRI3BPQ8WY22 251 aa17.17■□□□□ 0.34
TRAM1-201ENST00000262213 MROQ9BYG7 248 aa17.17■□□□□ 0.34
TRAM1-201ENST00000262213 RIBC2Q9H4K1 309 aa17.17■□□□□ 0.34
TRAM1-201ENST00000262213 FARSBQ9NSD9 589 aaKnown RBP17.17■□□□□ 0.34
TRAM1-201ENST00000262213 GIN1Q9NXP7 522 aa17.17■□□□□ 0.34
TRAM1-201ENST00000262213 TSC22D4Q9Y3Q8 395 aa17.17■□□□□ 0.34
TRAM1-201ENST00000262213 PCDHGC4Q9Y5F7 938 aa17.17■□□□□ 0.34
TRAM1-201ENST00000262213 NUP214P35658 2090 aaPredicted RBP17.17■□□□□ 0.34
TRAM1-201ENST00000262213 HTR3EA5X5Y0 456 aa17.16■□□□□ 0.34
TRAM1-201ENST00000262213 BCKDKO14874 412 aa17.16■□□□□ 0.34
TRAM1-201ENST00000262213 JRKO75564 520 aa17.16■□□□□ 0.34
TRAM1-201ENST00000262213 NPPAP01160 153 aa17.16■□□□□ 0.34
TRAM1-201ENST00000262213 ALDH2P05091 517 aa17.16■□□□□ 0.34
TRAM1-201ENST00000262213 CYP11A1P05108 521 aa17.16■□□□□ 0.34
TRAM1-201ENST00000262213 DCTP40126 519 aa17.16■□□□□ 0.34
TRAM1-201ENST00000262213 EID3Q8N140 333 aa17.16■□□□□ 0.34
TRAM1-201ENST00000262213 ZCCHC7Q8N3Z6 543 aaKnown RBP17.16■□□□□ 0.34
TRAM1-201ENST00000262213 ZNF548Q8NEK5 533 aaPredicted RBP17.16■□□□□ 0.34
TRAM1-201ENST00000262213 ZNF382Q96SR6 550 aa17.16■□□□□ 0.34
TRAM1-201ENST00000262213 MYOCQ99972 504 aa17.16■□□□□ 0.34
TRAM1-201ENST00000262213 FEM1AQ9BSK4 669 aa17.16■□□□□ 0.34
TRAM1-201ENST00000262213 SYT17Q9BSW7 474 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms