RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 MRPL28Q13084 256 aaKnown RBP4.08□□□□□ -1.76
UBE4A-201ENST00000252108 MAPKAPK3Q16644 382 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 PARP15Q460N3 678 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 RBM20Q5T481 1227 aaKnown RBP4.08□□□□□ -1.76
UBE4A-201ENST00000252108 SYCE2Q6PIF2 218 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 DDX53Q86TM3 631 aaKnown RBP4.08□□□□□ -1.76
UBE4A-201ENST00000252108 PTRH1Q86Y79 214 aaKnown RBP4.08□□□□□ -1.76
UBE4A-201ENST00000252108 NETO2Q8NC67 525 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 OR52K2Q8NGK3 314 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 SENP8Q96LD8 212 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 Q96MT0 163 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 COG8Q96MW5 612 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 KLHL32Q96NJ5 620 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 DOK1Q99704 481 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 EGFL8Q99944 293 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 SPATA9Q9BWV2 254 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 PRRG3Q9BZD7 231 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 TRIM45Q9H8W5 580 aaPredicted RBP4.08□□□□□ -1.76
UBE4A-201ENST00000252108 MARCH5Q9NX47 278 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 IMPAD1Q9NX62 359 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 NPAP1Q9NZP6 1156 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 DUX4Q9UBX2 424 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 PCDHB8Q9UN66 801 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 FAM32AQ9Y421 112 aaKnown RBP4.08□□□□□ -1.76
UBE4A-201ENST00000252108 SNX10Q9Y5X0 201 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 HS3ST4Q9Y661 456 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 FAM172BPA6NC97 362 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 NPIPB8E9PQR5 432 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 ZNF197O14709 1029 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 CPNE6O95741 557 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 ANGPTL1O95841 491 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 PTTG1O95997 202 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 HLA-DQB2P05538 268 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 F7P08709 466 aaPredicted RBP4.08□□□□□ -1.76
UBE4A-201ENST00000252108 MAGEA11P43364 429 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 MAP3K7CLP57077 242 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 C1DQ13901 141 aaKnown RBP4.08□□□□□ -1.76
UBE4A-201ENST00000252108 FUT11Q495W5 492 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 ZNF658BQ4V348 819 aaPredicted RBP4.08□□□□□ -1.76
UBE4A-201ENST00000252108 NHSL2Q5HYW2 709 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 ZNF678Q5SXM1 525 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 HMBOX1Q6NT76 420 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 CERS6Q6ZMG9 384 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 HDDC2Q7Z4H3 204 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 C14orf80Q86SX3 495 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 ANKRD13BQ86YJ7 626 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 METTL25Q8N6Q8 603 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 METTL6Q8TCB7 284 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 SPATA17Q96L03 361 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 C8orf48Q96LL4 319 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 ATOH8Q96SQ7 321 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 FAM83CQ9BQN1 747 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 DERL2Q9GZP9 239 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 FAM49AQ9H0Q0 323 aaPredicted RBP4.08□□□□□ -1.76
UBE4A-201ENST00000252108 TUBB1Q9H4B7 451 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 ACTR8Q9H981 624 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 OLAHQ9NV23 265 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 DUS2Q9NX74 493 aaKnown RBP4.08□□□□□ -1.76
UBE4A-201ENST00000252108 MTRRQ9UBK8 725 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 ZNF221Q9UK13 617 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 PACSIN3Q9UKS6 424 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 ERVK-11Q9UQG0 969 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 SCML2Q9UQR0 700 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 INVSQ9Y283 1065 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 PKP3Q9Y446 797 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 OR51B4Q9Y5P0 310 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 TCRBV5S2A0A599 114 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 HTR3EA5X5Y0 456 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 CENPXA8MT69 81 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 USP12O75317 370 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 HIST1H2AGP0C0S8 130 aaPredicted RBP4.08□□□□□ -1.76
UBE4A-201ENST00000252108 CKMT2P17540 419 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 HIST1H2ADP20671 130 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 S100A3P33764 101 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 SLC1A2P43004 574 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 PGGT1BP53609 377 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 MLLT6P55198 1093 aaPredicted RBP4.08□□□□□ -1.76
UBE4A-201ENST00000252108 C1QTNF8P60827 252 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 EIF2B5Q13144 721 aaKnown RBP4.08□□□□□ -1.76
UBE4A-201ENST00000252108 PRAMEF19Q5SWL8 479 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 ARMC6Q6NXE6 501 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 CNSTQ6PJW8 725 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 BLOC1S3Q6QNY0 202 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 BBS7Q8IWZ6 715 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 TMEM199Q8N511 208 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 FLCNQ8NFG4 579 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 ANKRD49Q8WVL7 239 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 VMP1Q96GC9 406 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 HIST1H2AHQ96KK5 128 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 HIST1H2AJQ99878 128 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 H2AFJQ9BTM1 129 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 MROQ9BYG7 248 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 OR2B2Q9GZK3 357 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 PCDHAC1Q9H158 963 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 RMI1Q9H9A7 625 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 SDR39U1Q9NRG7 319 aaPredicted RBP4.08□□□□□ -1.76
UBE4A-201ENST00000252108 SMOXQ9NWM0 555 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.08□□□□□ -1.762e-6■■■□□ 14.8
UBE4A-201ENST00000252108 NUDT5Q9UKK9 219 aa4.08□□□□□ -1.76
UBE4A-201ENST00000252108 PCDHGA4Q9Y5G9 962 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms