RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 NUP107P57740 925 aa24.51■■□□□ 1.51
RUNDC3A-201ENST00000225441 NTHL1P78549 312 aa24.51■■□□□ 1.51
RUNDC3A-201ENST00000225441 ZXDBP98169 803 aa24.51■■□□□ 1.51
RUNDC3A-201ENST00000225441 TEAD2Q15562 447 aa24.51■■□□□ 1.51
RUNDC3A-201ENST00000225441 EML3Q32P44 896 aa24.51■■□□□ 1.51
RUNDC3A-201ENST00000225441 ARHGAP15Q53QZ3 475 aa24.51■■□□□ 1.51
RUNDC3A-201ENST00000225441 PRSS36Q5K4E3 855 aa24.51■■□□□ 1.51
RUNDC3A-201ENST00000225441 NANOGP8Q6NSW7 305 aa24.51■■□□□ 1.51
RUNDC3A-201ENST00000225441 METTL2BQ6P1Q9 378 aaKnown RBP24.51■■□□□ 1.51
RUNDC3A-201ENST00000225441 ABRAXAS1Q6UWZ7 409 aa24.51■■□□□ 1.51
RUNDC3A-201ENST00000225441 PATL1Q86TB9 770 aaKnown RBP24.51■■□□□ 1.51
RUNDC3A-201ENST00000225441 DHRSXQ8N5I4 330 aa24.51■■□□□ 1.51
RUNDC3A-201ENST00000225441 ISG20Q96AZ6 181 aaKnown RBP24.51■■□□□ 1.51
RUNDC3A-201ENST00000225441 PLEKHG4BQ96PX9 1271 aa24.51■■□□□ 1.51
RUNDC3A-201ENST00000225441 NANOGQ9H9S0 305 aa24.51■■□□□ 1.51
RUNDC3A-201ENST00000225441 SMPD3Q9NY59 655 aaPredicted RBP24.51■■□□□ 1.51
RUNDC3A-201ENST00000225441 AP3M1Q9Y2T2 418 aa24.51■■□□□ 1.51
RUNDC3A-201ENST00000225441 DHRS7Q9Y394 339 aa24.51■■□□□ 1.51
RUNDC3A-201ENST00000225441 A0A1B0GTL3 188 aa24.51■■□□□ 1.51
RUNDC3A-201ENST00000225441 PLOD2O00469 737 aa24.51■■□□□ 1.51
RUNDC3A-201ENST00000225441 SYNCRIPO60506 623 aaKnown RBP24.51■■□□□ 1.51
RUNDC3A-201ENST00000225441 PAPLNO95428 1278 aa24.51■■□□□ 1.51
RUNDC3A-201ENST00000225441 PRSS56P0CW18 603 aa24.51■■□□□ 1.51
RUNDC3A-201ENST00000225441 UFM1P61960 85 aa24.51■■□□□ 1.51
RUNDC3A-201ENST00000225441 CACNG1Q06432 222 aa24.51■■□□□ 1.51
RUNDC3A-201ENST00000225441 LPCAT1Q8NF37 534 aa24.51■■□□□ 1.51
RUNDC3A-201ENST00000225441 DNAJB14Q8TBM8 379 aa24.51■■□□□ 1.51
RUNDC3A-201ENST00000225441 P2RY12Q9H244 342 aa24.51■■□□□ 1.51
RUNDC3A-201ENST00000225441 GALPQ9UBC7 116 aa24.51■■□□□ 1.51
RUNDC3A-201ENST00000225441 TRANK1O15050 2925 aa24.51■■□□□ 1.51
RUNDC3A-201ENST00000225441 E5RI56 91 aa24.5■■□□□ 1.51
RUNDC3A-201ENST00000225441 GREM1O60565 184 aa24.5■■□□□ 1.51
RUNDC3A-201ENST00000225441 RGS19P49795 217 aa24.5■■□□□ 1.51
RUNDC3A-201ENST00000225441 DCTN2Q13561 401 aaKnown RBP24.5■■□□□ 1.51
RUNDC3A-201ENST00000225441 PAGE3Q5JUK9 113 aa24.5■■□□□ 1.51
RUNDC3A-201ENST00000225441 ADGRF1Q5T601 910 aa24.5■■□□□ 1.51
RUNDC3A-201ENST00000225441 ISLR2Q6UXK2 745 aa24.5■■□□□ 1.51
RUNDC3A-201ENST00000225441 PIANPQ8IYJ0 282 aa24.5■■□□□ 1.51
RUNDC3A-201ENST00000225441 KIAA2013Q8IYS2 634 aa24.5■■□□□ 1.51
RUNDC3A-201ENST00000225441 C12orf76Q8N812 135 aaPredicted RBP24.5■■□□□ 1.51
RUNDC3A-201ENST00000225441 ZNF420Q8TAQ5 688 aaPredicted RBP24.5■■□□□ 1.51
RUNDC3A-201ENST00000225441 EEF1AKMT1Q8WVE0 214 aa24.5■■□□□ 1.51
RUNDC3A-201ENST00000225441 SMG7Q92540 1137 aaKnown RBP24.5■■□□□ 1.51
RUNDC3A-201ENST00000225441 CNDP2Q96KP4 475 aaKnown RBP24.5■■□□□ 1.51
RUNDC3A-201ENST00000225441 NSMCE3Q96MG7 304 aa24.5■■□□□ 1.51
RUNDC3A-201ENST00000225441 SFXN1Q9H9B4 322 aa24.5■■□□□ 1.51
RUNDC3A-201ENST00000225441 FKBPLQ9UIM3 349 aa24.5■■□□□ 1.51
RUNDC3A-201ENST00000225441 STOML2Q9UJZ1 356 aa24.5■■□□□ 1.51
RUNDC3A-201ENST00000225441 OAZ3Q9UMX2 235 aa24.5■■□□□ 1.51
RUNDC3A-201ENST00000225441 SOBPA7XYQ1 873 aa24.49■■□□□ 1.51
RUNDC3A-201ENST00000225441 S100BP04271 92 aaPredicted RBP24.49■■□□□ 1.51
RUNDC3A-201ENST00000225441 CDH1P12830 882 aa24.49■■□□□ 1.51
RUNDC3A-201ENST00000225441 HOXB6P17509 224 aaKnown RBP24.49■■□□□ 1.51
RUNDC3A-201ENST00000225441 OXTRP30559 389 aa24.49■■□□□ 1.51
RUNDC3A-201ENST00000225441 AGTR2P50052 363 aa24.49■■□□□ 1.51
RUNDC3A-201ENST00000225441 HK3P52790 923 aa24.49■■□□□ 1.51
RUNDC3A-201ENST00000225441 ECT2LQ008S8 904 aa24.49■■□□□ 1.51
RUNDC3A-201ENST00000225441 BIRC2Q13490 618 aa24.49■■□□□ 1.51
RUNDC3A-201ENST00000225441 TGFBIQ15582 683 aa24.49■■□□□ 1.51
RUNDC3A-201ENST00000225441 CRY1Q16526 586 aa24.49■■□□□ 1.51
RUNDC3A-201ENST00000225441 INO80DQ53TQ3 878 aaPredicted RBP24.49■■□□□ 1.51
RUNDC3A-201ENST00000225441 PSAPL1Q6NUJ1 521 aa24.49■■□□□ 1.51
RUNDC3A-201ENST00000225441 FNDC5Q8NAU1 212 aa24.49■■□□□ 1.51
RUNDC3A-201ENST00000225441 SIDT2Q8NBJ9 832 aaKnown RBP24.49■■□□□ 1.51
RUNDC3A-201ENST00000225441 PROKR1Q8TCW9 393 aa24.49■■□□□ 1.51
RUNDC3A-201ENST00000225441 EZH1Q92800 747 aaPredicted RBP24.49■■□□□ 1.51
RUNDC3A-201ENST00000225441 DZANK1Q9NVP4 752 aa24.49■■□□□ 1.51
RUNDC3A-201ENST00000225441 TNRC18O15417 2968 aaPredicted RBP24.49■■□□□ 1.51
RUNDC3A-201ENST00000225441 A0A1B0GVG6 124 aa24.49■■□□□ 1.51
RUNDC3A-201ENST00000225441 ZNF197O14709 1029 aa24.49■■□□□ 1.51
RUNDC3A-201ENST00000225441 CLOCKO15516 846 aa24.49■■□□□ 1.51
RUNDC3A-201ENST00000225441 NIPSNAP2O75323 286 aa24.49■■□□□ 1.51
RUNDC3A-201ENST00000225441 CDK4P11802 303 aa24.49■■□□□ 1.51
RUNDC3A-201ENST00000225441 CHRM3P20309 590 aa24.49■■□□□ 1.51
RUNDC3A-201ENST00000225441 RPS3P23396 243 aaKnown RBP eCLIP24.49■■□□□ 1.51
RUNDC3A-201ENST00000225441 RPS9P46781 194 aaKnown RBP24.49■■□□□ 1.51
RUNDC3A-201ENST00000225441 HPCAP84074 193 aa24.49■■□□□ 1.51
RUNDC3A-201ENST00000225441 ZRANB3Q5FWF4 1079 aa24.49■■□□□ 1.51
RUNDC3A-201ENST00000225441 RABL3Q5HYI8 236 aa24.49■■□□□ 1.51
RUNDC3A-201ENST00000225441 NCEH1Q6PIU2 408 aa24.49■■□□□ 1.51
RUNDC3A-201ENST00000225441 Q6ZNB5 142 aa24.49■■□□□ 1.51
RUNDC3A-201ENST00000225441 USP51Q70EK9 711 aa24.49■■□□□ 1.51
RUNDC3A-201ENST00000225441 ZNF786Q8N393 782 aa24.49■■□□□ 1.51
RUNDC3A-201ENST00000225441 OR8J3Q8NGG0 315 aa24.49■■□□□ 1.51
RUNDC3A-201ENST00000225441 OR2T11Q8NH01 316 aa24.49■■□□□ 1.51
RUNDC3A-201ENST00000225441 BPIFB1Q8TDL5 484 aa24.49■■□□□ 1.51
RUNDC3A-201ENST00000225441 VPS33AQ96AX1 596 aa24.49■■□□□ 1.51
RUNDC3A-201ENST00000225441 IGFLR1Q9H665 355 aa24.49■■□□□ 1.51
RUNDC3A-201ENST00000225441 LSM7Q9UK45 103 aaKnown RBP24.49■■□□□ 1.51
RUNDC3A-201ENST00000225441 FADS3Q9Y5Q0 445 aa24.49■■□□□ 1.51
RUNDC3A-201ENST00000225441 A0A1B0GTW7 788 aa24.48■■□□□ 1.51
RUNDC3A-201ENST00000225441 PCSK2P16519 638 aa24.48■■□□□ 1.51
RUNDC3A-201ENST00000225441 JAK1P23458 1154 aa24.48■■□□□ 1.51
RUNDC3A-201ENST00000225441 PRDX3P30048 256 aaKnown RBP24.48■■□□□ 1.51
RUNDC3A-201ENST00000225441 CLCN7P51798 805 aa24.48■■□□□ 1.51
RUNDC3A-201ENST00000225441 TMC5Q6UXY8 1006 aa24.48■■□□□ 1.51
RUNDC3A-201ENST00000225441 Q6ZSR9 355 aa24.48■■□□□ 1.51
RUNDC3A-201ENST00000225441 CROCCP3Q8IVE0 287 aa24.48■■□□□ 1.51
RUNDC3A-201ENST00000225441 CMTM8Q8IZV2 173 aa24.48■■□□□ 1.51
RUNDC3A-201ENST00000225441 DRAXINQ8NBI3 349 aaPredicted RBP24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms