RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 MLNP12872 115 aa13.42□□□□□ -0.26
GABPB1-201ENST00000220429 TRIM23P36406 574 aa13.42□□□□□ -0.26
GABPB1-201ENST00000220429 FAPQ12884 760 aa13.42□□□□□ -0.26
GABPB1-201ENST00000220429 SEMA3BQ13214 749 aa13.42□□□□□ -0.26
GABPB1-201ENST00000220429 STARD3Q14849 445 aa13.42□□□□□ -0.26
GABPB1-201ENST00000220429 UPP1Q16831 310 aa13.42□□□□□ -0.26
GABPB1-201ENST00000220429 TIGD5Q53EQ6 642 aa13.42□□□□□ -0.26
GABPB1-201ENST00000220429 STEAP4Q687X5 459 aa13.42□□□□□ -0.26
GABPB1-201ENST00000220429 CREB3L2Q70SY1 520 aa13.42□□□□□ -0.26
GABPB1-201ENST00000220429 BHLHA9Q7RTU4 235 aa13.42□□□□□ -0.26
GABPB1-201ENST00000220429 PM20D2Q8IYS1 436 aa13.42□□□□□ -0.26
GABPB1-201ENST00000220429 TAGAPQ8N103 731 aa13.42□□□□□ -0.26
GABPB1-201ENST00000220429 OR8K3Q8NH51 312 aa13.42□□□□□ -0.26
GABPB1-201ENST00000220429 NTAN1Q96AB6 310 aa13.42□□□□□ -0.26
GABPB1-201ENST00000220429 B3GALT6Q96L58 329 aa13.42□□□□□ -0.26
GABPB1-201ENST00000220429 RTP3Q9BQQ7 232 aa13.42□□□□□ -0.26
GABPB1-201ENST00000220429 PPA2Q9H2U2 334 aa13.42□□□□□ -0.26
GABPB1-201ENST00000220429 SPAG4Q9NPE6 437 aa13.42□□□□□ -0.26
GABPB1-201ENST00000220429 HPS4Q9NQG7 708 aa13.42□□□□□ -0.26
GABPB1-201ENST00000220429 PAK1IP1Q9NWT1 392 aaPredicted RBP13.42□□□□□ -0.26
GABPB1-201ENST00000220429 STOML2Q9UJZ1 356 aa13.42□□□□□ -0.26
GABPB1-201ENST00000220429 CDH9Q9ULB4 789 aa13.42□□□□□ -0.26
GABPB1-201ENST00000220429 MRPS7Q9Y2R9 242 aaKnown RBP13.42□□□□□ -0.26
GABPB1-201ENST00000220429 CACNG2Q9Y698 323 aa13.42□□□□□ -0.26
GABPB1-201ENST00000220429 TRAV6A0A075B6T7 132 aa13.42□□□□□ -0.26
GABPB1-201ENST00000220429 KCNU1A8MYU2 1149 aa13.42□□□□□ -0.26
GABPB1-201ENST00000220429 ERCC2P18074 760 aa13.42□□□□□ -0.26
GABPB1-201ENST00000220429 GGT5P36269 586 aa13.42□□□□□ -0.26
GABPB1-201ENST00000220429 PRIM2P49643 509 aa13.42□□□□□ -0.26
GABPB1-201ENST00000220429 ERVK-21P61565 698 aa13.42□□□□□ -0.26
GABPB1-201ENST00000220429 NCS1P62166 190 aa13.42□□□□□ -0.26
GABPB1-201ENST00000220429 ZNF45Q02386 682 aa13.42□□□□□ -0.26
GABPB1-201ENST00000220429 SCAPQ12770 1279 aa13.42□□□□□ -0.26
GABPB1-201ENST00000220429 GPAT3Q53EU6 434 aa13.42□□□□□ -0.26
GABPB1-201ENST00000220429 RGMBQ6NW40 437 aa13.42□□□□□ -0.26
GABPB1-201ENST00000220429 SLC22A17Q8WUG5 538 aa13.42□□□□□ -0.26
GABPB1-201ENST00000220429 NMRK2Q9NPI5 230 aa13.42□□□□□ -0.26
GABPB1-201ENST00000220429 EIF2B3Q9NR50 452 aaKnown RBP13.42□□□□□ -0.26
GABPB1-201ENST00000220429 TBC1D13Q9NVG8 400 aa13.42□□□□□ -0.26
GABPB1-201ENST00000220429 EMC3Q9P0I2 261 aa13.42□□□□□ -0.26
GABPB1-201ENST00000220429 DCDC2Q9UHG0 476 aa13.42□□□□□ -0.26
GABPB1-201ENST00000220429 BTBD3Q9Y2F9 522 aa13.42□□□□□ -0.26
GABPB1-201ENST00000220429 PTCH2Q9Y6C5 1203 aa13.42□□□□□ -0.26
GABPB1-201ENST00000220429 TTC3P53804 2025 aa13.42□□□□□ -0.26
GABPB1-201ENST00000220429 A0A1W2PRG6 482 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 DHRS12A0PJE2 317 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 LINC00862A6NCI5 91 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 PTP4A3O75365 173 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 LTFP02788 710 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 HOXD4P09016 255 aaPredicted RBP13.41□□□□□ -0.26
GABPB1-201ENST00000220429 IL7RP16871 459 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 ATP6V1B2P21281 511 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 SESN2P58004 480 aaPredicted RBP13.41□□□□□ -0.26
GABPB1-201ENST00000220429 NKX3-2P78367 333 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 MRPL10Q7Z7H8 261 aaKnown RBP13.41□□□□□ -0.26
GABPB1-201ENST00000220429 RAB43Q86YS6 212 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 PLD3Q8IV08 490 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 PHC2Q8IXK0 858 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 PARP16Q8N5Y8 322 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 ZBTB44Q8NCP5 570 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 ARNTL2Q8WYA1 636 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 ARHGAP39Q9C0H5 1083 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 MMP27Q9H306 513 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 OSGIN1Q9UJX0 560 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 FBXW11Q9UKB1 542 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 PRSS44E7EML9 344 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 F8W810 466 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 PCMT1P22061 227 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 KELP23276 732 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 MGAT1P26572 445 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 RPL9P32969 192 aaKnown RBP13.41□□□□□ -0.26
GABPB1-201ENST00000220429 CD68P34810 354 aaPredicted RBP13.41□□□□□ -0.26
GABPB1-201ENST00000220429 HNF1BP35680 557 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 AIF1P55008 147 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 RIN1Q13671 783 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 IMPG1Q17R60 797 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 PAN2Q504Q3 1202 aaKnown RBP13.41□□□□□ -0.26
GABPB1-201ENST00000220429 HABP4Q5JVS0 413 aaKnown RBP13.41□□□□□ -0.26
GABPB1-201ENST00000220429 SAMD4BQ5PRF9 694 aaKnown RBP13.41□□□□□ -0.26
GABPB1-201ENST00000220429 CACHD1Q5VU97 1274 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 CASC4Q6P4E1 433 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 BRAT1Q6PJG6 821 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 CYS1Q717R9 158 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 P2RY8Q86VZ1 359 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 BBS7Q8IWZ6 715 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 TBC1D21Q8IYX1 336 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 FAM9CQ8IZT9 166 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 DEPDC1BQ8WUY9 529 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 ST8SIA2Q92186 375 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 SLC7A6Q92536 515 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 HDAC10Q969S8 669 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 MYLPFQ96A32 169 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 PGAP3Q96FM1 320 aaPredicted RBP13.41□□□□□ -0.26
GABPB1-201ENST00000220429 SMARCD1Q96GM5 515 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 ZNF300Q96RE9 604 aaPredicted RBP13.41□□□□□ -0.26
GABPB1-201ENST00000220429 DDIT4Q9NX09 232 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 CCDC59Q9P031 241 aaKnown RBP13.41□□□□□ -0.26
GABPB1-201ENST00000220429 SLC17A6Q9P2U8 582 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 OPTCQ9UBM4 332 aa13.41□□□□□ -0.26
GABPB1-201ENST00000220429 ADGRE2Q9UHX3 823 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms