RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 C1RP00736 705 aa14.44□□□□□ -0.1
PTPRA-201ENST00000216877 ITGA2P17301 1181 aa14.44□□□□□ -0.1
PTPRA-201ENST00000216877 SSTR4P31391 388 aa14.44□□□□□ -0.1
PTPRA-201ENST00000216877 IDH2P48735 452 aaKnown RBP14.44□□□□□ -0.1
PTPRA-201ENST00000216877 BNC1Q01954 994 aa14.44□□□□□ -0.1
PTPRA-201ENST00000216877 RUNX1T1Q06455 604 aa14.44□□□□□ -0.1
PTPRA-201ENST00000216877 EFR3AQ14156 821 aa14.44□□□□□ -0.1
PTPRA-201ENST00000216877 MXD4Q14582 209 aaPredicted RBP14.44□□□□□ -0.1
PTPRA-201ENST00000216877 MED22Q15528 200 aa14.44□□□□□ -0.1
PTPRA-201ENST00000216877 PSTKQ8IV42 348 aaKnown RBP14.44□□□□□ -0.1
PTPRA-201ENST00000216877 STX19Q8N4C7 294 aa14.44□□□□□ -0.1
PTPRA-201ENST00000216877 CPA6Q8N4T0 437 aa14.44□□□□□ -0.1
PTPRA-201ENST00000216877 CDYL2Q8N8U2 506 aa14.44□□□□□ -0.1
PTPRA-201ENST00000216877 OR10A6Q8NH74 314 aa14.44□□□□□ -0.1
PTPRA-201ENST00000216877 YIPF6Q96EC8 236 aa14.44□□□□□ -0.1
PTPRA-201ENST00000216877 KCTD15Q96SI1 283 aaPredicted RBP14.44□□□□□ -0.1
PTPRA-201ENST00000216877 GPR22Q99680 433 aa14.44□□□□□ -0.1
PTPRA-201ENST00000216877 WASH6PQ9NQA3 447 aa14.44□□□□□ -0.1
PTPRA-201ENST00000216877 ING3Q9NXR8 418 aa14.44□□□□□ -0.1
PTPRA-201ENST00000216877 OSGIN1Q9UJX0 560 aa14.44□□□□□ -0.1
PTPRA-201ENST00000216877 ERI2A8K979 691 aaKnown RBP14.44□□□□□ -0.1
PTPRA-201ENST00000216877 DHX15O43143 795 aaKnown RBP14.44□□□□□ -0.1
PTPRA-201ENST00000216877 KCNC1P48547 511 aa14.44□□□□□ -0.1
PTPRA-201ENST00000216877 CXCR3P49682 368 aa14.44□□□□□ -0.1
PTPRA-201ENST00000216877 NFE2L1Q14494 772 aa14.44□□□□□ -0.1
PTPRA-201ENST00000216877 UGP2Q16851 508 aa14.44□□□□□ -0.1
PTPRA-201ENST00000216877 GOLGA7BQ2TAP0 167 aa14.44□□□□□ -0.1
PTPRA-201ENST00000216877 RBM20Q5T481 1227 aaKnown RBP14.44□□□□□ -0.1
PTPRA-201ENST00000216877 MILR1Q7Z6M3 343 aa14.44□□□□□ -0.1
PTPRA-201ENST00000216877 RAB44Q7Z6P3 723 aaPredicted RBP14.44□□□□□ -0.1
PTPRA-201ENST00000216877 SH3KBP1Q96B97 665 aa14.44□□□□□ -0.1
PTPRA-201ENST00000216877 TMEM176AQ96HP8 235 aa14.44□□□□□ -0.1
PTPRA-201ENST00000216877 PDZD7Q9H5P4 517 aa14.44□□□□□ -0.1
PTPRA-201ENST00000216877 SLC23A1Q9UHI7 598 aa14.44□□□□□ -0.1
PTPRA-201ENST00000216877 ZBTB24O43167 697 aaPredicted RBP14.43□□□□□ -0.1
PTPRA-201ENST00000216877 ITGB3P05106 788 aa14.43□□□□□ -0.1
PTPRA-201ENST00000216877 RPLP0P05388 317 aaKnown RBP14.43□□□□□ -0.1
PTPRA-201ENST00000216877 NPY2RP49146 381 aa14.43□□□□□ -0.1
PTPRA-201ENST00000216877 FOXA1P55317 472 aa14.43□□□□□ -0.1
PTPRA-201ENST00000216877 EMC2Q15006 297 aa14.43□□□□□ -0.1
PTPRA-201ENST00000216877 DDR2Q16832 855 aa14.43□□□□□ -0.1
PTPRA-201ENST00000216877 SPDYE7PQ495Y7 208 aa14.43□□□□□ -0.1
PTPRA-201ENST00000216877 ESRP1Q6NXG1 681 aaKnown RBP14.43□□□□□ -0.1
PTPRA-201ENST00000216877 SLC44A2Q8IWA5 706 aaPredicted RBP14.43□□□□□ -0.1
PTPRA-201ENST00000216877 ADHFE1Q8IWW8 467 aa14.43□□□□□ -0.1
PTPRA-201ENST00000216877 PABPC5Q96DU9 382 aaKnown RBP14.43□□□□□ -0.1
PTPRA-201ENST00000216877 B3GALT6Q96L58 329 aa14.43□□□□□ -0.1
PTPRA-201ENST00000216877 ELOVL4Q9GZR5 314 aa14.43□□□□□ -0.1
PTPRA-201ENST00000216877 FAM83DQ9H4H8 585 aa14.43□□□□□ -0.1
PTPRA-201ENST00000216877 CD274Q9NZQ7 290 aa14.43□□□□□ -0.1
PTPRA-201ENST00000216877 DNAJB9Q9UBS3 223 aa14.43□□□□□ -0.1
PTPRA-201ENST00000216877 SMCHD1A6NHR9 2005 aa14.43□□□□□ -0.1
PTPRA-201ENST00000216877 H0YCG3 227 aa14.43□□□□□ -0.1
PTPRA-201ENST00000216877 IFNA16P05015 189 aa14.43□□□□□ -0.1
PTPRA-201ENST00000216877 PFKLP17858 780 aa14.43□□□□□ -0.1
PTPRA-201ENST00000216877 DGKQP52824 942 aa14.43□□□□□ -0.1
PTPRA-201ENST00000216877 SMARCB1Q12824 385 aa14.43□□□□□ -0.1
PTPRA-201ENST00000216877 GALNT3Q14435 633 aa14.43□□□□□ -0.1
PTPRA-201ENST00000216877 SETMARQ53H47 684 aaPredicted RBP14.43□□□□□ -0.1
PTPRA-201ENST00000216877 PYDC2Q56P42 97 aa14.43□□□□□ -0.1
PTPRA-201ENST00000216877 TYW3Q6IPR3 259 aaKnown RBP14.43□□□□□ -0.1
PTPRA-201ENST00000216877 WDR49Q8IV35 697 aa14.43□□□□□ -0.1
PTPRA-201ENST00000216877 PTGR2Q8N8N7 351 aaPredicted RBP14.43□□□□□ -0.1
PTPRA-201ENST00000216877 FNDC5Q8NAU1 212 aa14.43□□□□□ -0.1
PTPRA-201ENST00000216877 OR6C4Q8NGE1 309 aa14.43□□□□□ -0.1
PTPRA-201ENST00000216877 CLEC4DQ8WXI8 215 aa14.43□□□□□ -0.1
PTPRA-201ENST00000216877 TEX37Q96LM6 180 aa14.43□□□□□ -0.1
PTPRA-201ENST00000216877 CNPPD1Q9BV87 410 aa14.43□□□□□ -0.1
PTPRA-201ENST00000216877 SCPEP1Q9HB40 452 aa14.43□□□□□ -0.1
PTPRA-201ENST00000216877 IL1RAPQ9NPH3 570 aa14.43□□□□□ -0.1
PTPRA-201ENST00000216877 ZNF70Q9UC06 446 aaPredicted RBP14.43□□□□□ -0.1
PTPRA-201ENST00000216877 GRIP1Q9Y3R0 1128 aa14.43□□□□□ -0.1
PTPRA-201ENST00000216877 WWP2O00308 870 aa14.43□□□□□ -0.1
PTPRA-201ENST00000216877 TLL1O43897 1013 aa14.43□□□□□ -0.1
PTPRA-201ENST00000216877 PMPCBO75439 489 aa14.43□□□□□ -0.1
PTPRA-201ENST00000216877 SLITRK5O94991 958 aa14.43□□□□□ -0.1
PTPRA-201ENST00000216877 SNX4O95219 450 aa14.43□□□□□ -0.1
PTPRA-201ENST00000216877 HRH2P25021 359 aa14.43□□□□□ -0.1
PTPRA-201ENST00000216877 JAK3P52333 1124 aa14.43□□□□□ -0.1
PTPRA-201ENST00000216877 RAB14P61106 215 aa14.43□□□□□ -0.1
PTPRA-201ENST00000216877 TGFB2P61812 414 aa14.43□□□□□ -0.1
PTPRA-201ENST00000216877 ZNF284Q2VY69 593 aa14.43□□□□□ -0.1
PTPRA-201ENST00000216877 HACD2Q6Y1H2 254 aa14.43□□□□□ -0.1
PTPRA-201ENST00000216877 LARP4Q71RC2 724 aaKnown RBP eCLIP14.43□□□□□ -0.12e-6■□□□□ 8.1
PTPRA-201ENST00000216877 PROSER1Q86XN7 944 aa14.43□□□□□ -0.1
PTPRA-201ENST00000216877 CLEC4CQ8WTT0 213 aa14.43□□□□□ -0.1
PTPRA-201ENST00000216877 FBXW5Q969U6 566 aa14.43□□□□□ -0.1
PTPRA-201ENST00000216877 BCL7BQ9BQE9 202 aa14.43□□□□□ -0.1
PTPRA-201ENST00000216877 SNTG1Q9NSN8 517 aa14.43□□□□□ -0.1
PTPRA-201ENST00000216877 ARHGAP28Q9P2N2 729 aa14.43□□□□□ -0.1
PTPRA-201ENST00000216877 MUTYHQ9UIF7 546 aa14.43□□□□□ -0.1
PTPRA-201ENST00000216877 CFL2Q9Y281 166 aa14.43□□□□□ -0.1
PTPRA-201ENST00000216877 DNAJB5O75953 348 aa14.42□□□□□ -0.1
PTPRA-201ENST00000216877 NFKB1P19838 968 aa14.42□□□□□ -0.1
PTPRA-201ENST00000216877 ADORA2BP29275 332 aa14.42□□□□□ -0.1
PTPRA-201ENST00000216877 TNFSF8P32971 234 aa14.42□□□□□ -0.1
PTPRA-201ENST00000216877 NR2C2P49116 596 aa14.42□□□□□ -0.1
PTPRA-201ENST00000216877 CXCL9Q07325 125 aa14.42□□□□□ -0.1
PTPRA-201ENST00000216877 NCBP2-AS2Q69YL0 99 aa14.42□□□□□ -0.1
PTPRA-201ENST00000216877 APOBEC3HQ6NTF7 200 aaKnown RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms