RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 TANKQ92844 425 aa13.08□□□□□ -0.32
SRP54-201ENST00000216774 PLEKHA8Q96JA3 519 aa13.08□□□□□ -0.32
SRP54-201ENST00000216774 GLT1D1Q96MS3 346 aa13.08□□□□□ -0.32
SRP54-201ENST00000216774 RBM4BQ9BQ04 359 aaKnown RBP13.08□□□□□ -0.32
SRP54-201ENST00000216774 RBM4Q9BWF3 364 aaKnown RBP13.08□□□□□ -0.32
SRP54-201ENST00000216774 GPR62Q9BZJ7 368 aa13.08□□□□□ -0.32
SRP54-201ENST00000216774 CWH43Q9H720 699 aa13.08□□□□□ -0.32
SRP54-201ENST00000216774 MAGEE1Q9HCI5 957 aa13.08□□□□□ -0.32
SRP54-201ENST00000216774 PSME2Q9UL46 239 aa13.08□□□□□ -0.32
SRP54-201ENST00000216774 FNDC3AQ9Y2H6 1198 aaKnown RBP13.08□□□□□ -0.32
SRP54-201ENST00000216774 ZNF510Q9Y2H8 683 aa13.08□□□□□ -0.32
SRP54-201ENST00000216774 A0A1B0GVM2 712 aa13.08□□□□□ -0.32
SRP54-201ENST00000216774 IQCF5A8MTL0 148 aa13.08□□□□□ -0.32
SRP54-201ENST00000216774 SLC28A1O00337 649 aa13.08□□□□□ -0.32
SRP54-201ENST00000216774 DFNA5O60443 496 aa13.08□□□□□ -0.32
SRP54-201ENST00000216774 FOXD2O60548 495 aaPredicted RBP13.08□□□□□ -0.32
SRP54-201ENST00000216774 SCELO95171 688 aa13.08□□□□□ -0.32
SRP54-201ENST00000216774 CST1P01037 141 aa13.08□□□□□ -0.32
SRP54-201ENST00000216774 IL6P05231 212 aa13.08□□□□□ -0.32
SRP54-201ENST00000216774 SLC2A4P14672 509 aa13.08□□□□□ -0.32
SRP54-201ENST00000216774 CST5P28325 142 aaPredicted RBP13.08□□□□□ -0.32
SRP54-201ENST00000216774 HUNKP57058 714 aa13.08□□□□□ -0.32
SRP54-201ENST00000216774 CYP4F3Q08477 520 aa13.08□□□□□ -0.32
SRP54-201ENST00000216774 DUSP4Q13115 394 aa13.08□□□□□ -0.32
SRP54-201ENST00000216774 MAPKAPK3Q16644 382 aa13.08□□□□□ -0.32
SRP54-201ENST00000216774 C18orf21Q32NC0 220 aaPredicted RBP13.08□□□□□ -0.32
SRP54-201ENST00000216774 ANKDD1AQ495B1 522 aa13.08□□□□□ -0.32
SRP54-201ENST00000216774 NCEH1Q6PIU2 408 aa13.08□□□□□ -0.32
SRP54-201ENST00000216774 XKR5Q6UX68 686 aa13.08□□□□□ -0.32
SRP54-201ENST00000216774 R3HCC1LQ7Z5L2 792 aaKnown RBP13.08□□□□□ -0.32
SRP54-201ENST00000216774 RASAL3Q86YV0 1011 aa13.08□□□□□ -0.32
SRP54-201ENST00000216774 IFNL1Q8IU54 200 aa13.08□□□□□ -0.32
SRP54-201ENST00000216774 DENND1CQ8IV53 801 aa13.08□□□□□ -0.32
SRP54-201ENST00000216774 RBM12BQ8IXT5 1001 aaKnown RBP13.08□□□□□ -0.32
SRP54-201ENST00000216774 PDZD8Q8NEN9 1154 aa13.08□□□□□ -0.32
SRP54-201ENST00000216774 SNX19Q92543 992 aa13.08□□□□□ -0.32
SRP54-201ENST00000216774 UPF1Q92900 1129 aaKnown RBP eCLIP13.08□□□□□ -0.32
SRP54-201ENST00000216774 PLD4Q96BZ4 506 aa13.08□□□□□ -0.32
SRP54-201ENST00000216774 COX4I2Q96KJ9 171 aa13.08□□□□□ -0.32
SRP54-201ENST00000216774 B3GALT6Q96L58 329 aa13.08□□□□□ -0.32
SRP54-201ENST00000216774 CEP295NLQ96MC4 621 aa13.08□□□□□ -0.32
SRP54-201ENST00000216774 HBEGFQ99075 208 aa13.08□□□□□ -0.32
SRP54-201ENST00000216774 THUMPD3Q9BV44 507 aaKnown RBP13.08□□□□□ -0.32
SRP54-201ENST00000216774 NACA2Q9H009 215 aa13.08□□□□□ -0.32
SRP54-201ENST00000216774 ADNPQ9H2P0 1102 aa13.08□□□□□ -0.32
SRP54-201ENST00000216774 ASIC5Q9NY37 505 aa13.08□□□□□ -0.32
SRP54-201ENST00000216774 IL17CQ9P0M4 197 aa13.08□□□□□ -0.32
SRP54-201ENST00000216774 ADGRE2Q9UHX3 823 aa13.08□□□□□ -0.32
SRP54-201ENST00000216774 OARD1Q9Y530 152 aa13.08□□□□□ -0.32
SRP54-201ENST00000216774 DNAJB5O75953 348 aa13.07□□□□□ -0.32
SRP54-201ENST00000216774 BCL10O95999 233 aa13.07□□□□□ -0.32
SRP54-201ENST00000216774 COL6A1P12109 1028 aa13.07□□□□□ -0.32
SRP54-201ENST00000216774 CKBP12277 381 aa13.07□□□□□ -0.32
SRP54-201ENST00000216774 ZNF182P17025 639 aaPredicted RBP13.07□□□□□ -0.32
SRP54-201ENST00000216774 RPS3P23396 243 aaKnown RBP eCLIP13.07□□□□□ -0.328e-6■■□□□ 12.6
SRP54-201ENST00000216774 RPL38P63173 70 aaKnown RBP13.07□□□□□ -0.32
SRP54-201ENST00000216774 TOP3AQ13472 1001 aaPredicted RBP13.07□□□□□ -0.32
SRP54-201ENST00000216774 GTF2IRD2BQ6EKJ0 949 aa13.07□□□□□ -0.32
SRP54-201ENST00000216774 METTL2BQ6P1Q9 378 aaKnown RBP13.07□□□□□ -0.32
SRP54-201ENST00000216774 RSPO2Q6UXX9 243 aaPredicted RBP13.07□□□□□ -0.32
SRP54-201ENST00000216774 GTF2IRD2Q86UP8 949 aa13.07□□□□□ -0.32
SRP54-201ENST00000216774 SPARTQ8N0X7 666 aa13.07□□□□□ -0.32
SRP54-201ENST00000216774 FAM86B1Q8N7N1 296 aa13.07□□□□□ -0.32
SRP54-201ENST00000216774 DNAJB8Q8NHS0 232 aa13.07□□□□□ -0.32
SRP54-201ENST00000216774 SLC22A17Q8WUG5 538 aa13.07□□□□□ -0.32
SRP54-201ENST00000216774 SLC47A1Q96FL8 570 aa13.07□□□□□ -0.32
SRP54-201ENST00000216774 MBOAT4Q96T53 435 aa13.07□□□□□ -0.32
SRP54-201ENST00000216774 LHPPQ9H008 270 aa13.07□□□□□ -0.32
SRP54-201ENST00000216774 NSUN3Q9H649 340 aaKnown RBP13.07□□□□□ -0.32
SRP54-201ENST00000216774 MAGIXQ9H6Y5 334 aa13.07□□□□□ -0.32
SRP54-201ENST00000216774 CARS2Q9HA77 564 aaKnown RBP13.07□□□□□ -0.32
SRP54-201ENST00000216774 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.07□□□□□ -0.32
SRP54-201ENST00000216774 LIMD1Q9UGP4 676 aa13.07□□□□□ -0.32
SRP54-201ENST00000216774 GNPTGQ9UJJ9 305 aa13.07□□□□□ -0.32
SRP54-201ENST00000216774 MAGED1Q9Y5V3 778 aaPredicted RBP13.07□□□□□ -0.32
SRP54-201ENST00000216774 ELOVL7A1L3X0 281 aa13.06□□□□□ -0.32
SRP54-201ENST00000216774 H7C4K7 107 aa13.06□□□□□ -0.32
SRP54-201ENST00000216774 WDR47O94967 919 aa13.06□□□□□ -0.32
SRP54-201ENST00000216774 RETP07949 1114 aa13.06□□□□□ -0.32
SRP54-201ENST00000216774 ATF6P18850 670 aa13.06□□□□□ -0.32
SRP54-201ENST00000216774 HMGCLP35914 325 aa13.06□□□□□ -0.32
SRP54-201ENST00000216774 RGS4P49798 205 aa13.06□□□□□ -0.32
SRP54-201ENST00000216774 BMXP51813 675 aa13.06□□□□□ -0.32
SRP54-201ENST00000216774 FAM174BQ3ZCQ3 159 aa13.06□□□□□ -0.32
SRP54-201ENST00000216774 C6orf141Q5SZD1 244 aa13.06□□□□□ -0.32
SRP54-201ENST00000216774 CACHD1Q5VU97 1274 aa13.06□□□□□ -0.32
SRP54-201ENST00000216774 PTRHD1Q6GMV3 140 aaKnown RBP13.06□□□□□ -0.32
SRP54-201ENST00000216774 ENPP6Q6UWR7 440 aa13.06□□□□□ -0.32
SRP54-201ENST00000216774 TRIM46Q7Z4K8 759 aa13.06□□□□□ -0.32
SRP54-201ENST00000216774 ZC3H7AQ8IWR0 971 aaKnown RBP13.06□□□□□ -0.32
SRP54-201ENST00000216774 PCSK9Q8NBP7 692 aaKnown RBP13.06□□□□□ -0.32
SRP54-201ENST00000216774 CHDHQ8NE62 594 aaPredicted RBP13.06□□□□□ -0.32
SRP54-201ENST00000216774 OR10A6Q8NH74 314 aa13.06□□□□□ -0.32
SRP54-201ENST00000216774 FBXO30Q8TB52 745 aa13.06□□□□□ -0.32
SRP54-201ENST00000216774 TRUB1Q8WWH5 349 aaKnown RBP13.06□□□□□ -0.32
SRP54-201ENST00000216774 OVCA2Q8WZ82 227 aa13.06□□□□□ -0.32
SRP54-201ENST00000216774 CLPBQ9H078 707 aa13.06□□□□□ -0.32
SRP54-201ENST00000216774 ACTR8Q9H981 624 aa13.06□□□□□ -0.32
SRP54-201ENST00000216774 TMEM161AQ9NX61 479 aa13.06□□□□□ -0.32
SRP54-201ENST00000216774 ZMYM5Q9UJ78 669 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms