RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 GkQ64516 559 aa15.62■□□□□ 0.09
Trim39-203ENSMUST00000113706 Krba1Q6NXZ1 1043 aa15.62■□□□□ 0.09
Trim39-203ENSMUST00000113706 ChfrQ810L3 664 aa15.62■□□□□ 0.09
Trim39-203ENSMUST00000113706 Nudt4Q8R2U6 179 aa15.62■□□□□ 0.09
Trim39-203ENSMUST00000113706 Acsf2Q8VCW8 615 aa15.62■□□□□ 0.09
Trim39-203ENSMUST00000113706 Golm1Q91XA2 393 aa15.62■□□□□ 0.09
Trim39-203ENSMUST00000113706 Adgrl4Q923X1 739 aa15.62■□□□□ 0.09
Trim39-203ENSMUST00000113706 AdprmQ99KS6 340 aa15.62■□□□□ 0.09
Trim39-203ENSMUST00000113706 Pin1Q9QUR7 165 aa15.62■□□□□ 0.09
Trim39-203ENSMUST00000113706 Tagln3Q9R1Q8 199 aa15.62■□□□□ 0.09
Trim39-203ENSMUST00000113706 Psmd3P14685 530 aa15.62■□□□□ 0.09
Trim39-203ENSMUST00000113706 Prim2P33610 505 aa15.62■□□□□ 0.09
Trim39-203ENSMUST00000113706 Coq10bQ3THF9 240 aa15.62■□□□□ 0.09
Trim39-203ENSMUST00000113706 Ntrk1Q3UFB7 799 aa15.62■□□□□ 0.09
Trim39-203ENSMUST00000113706 Nt5c3bQ3UFY7 300 aa15.62■□□□□ 0.09
Trim39-203ENSMUST00000113706 Gm5431Q5NCB3 844 aa15.62■□□□□ 0.09
Trim39-203ENSMUST00000113706 Hfe2Q7TQ32 420 aa15.62■□□□□ 0.09
Trim39-203ENSMUST00000113706 Gramd1bQ80TI0 738 aa15.62■□□□□ 0.09
Trim39-203ENSMUST00000113706 Aqp12Q8CHJ2 290 aa15.62■□□□□ 0.09
Trim39-203ENSMUST00000113706 Stx5Q8K1E0 355 aa15.62■□□□□ 0.09
Trim39-203ENSMUST00000113706 Capn8Q91VA3 703 aa15.62■□□□□ 0.09
Trim39-203ENSMUST00000113706 Gmpr2Q99L27 348 aa15.62■□□□□ 0.09
Trim39-203ENSMUST00000113706 Poc5Q9DBS8 558 aa15.62■□□□□ 0.09
Trim39-203ENSMUST00000113706 CrotQ9DC50 612 aa15.62■□□□□ 0.09
Trim39-203ENSMUST00000113706 Ap4s1Q9WVL1 144 aa15.62■□□□□ 0.09
Trim39-203ENSMUST00000113706 Keap1Q9Z2X8 624 aaKnown RBP15.62■□□□□ 0.09
Trim39-203ENSMUST00000113706 Phf11bB4XVQ1 276 aa15.61■□□□□ 0.09
Trim39-203ENSMUST00000113706 Gm8444F6XS56 118 aa15.61■□□□□ 0.09
Trim39-203ENSMUST00000113706 Pabpc4lG5E8X2 370 aa15.61■□□□□ 0.09
Trim39-203ENSMUST00000113706 Gnao1P18872 354 aa15.61■□□□□ 0.09
Trim39-203ENSMUST00000113706 Ikzf1Q03267 517 aa15.61■□□□□ 0.09
Trim39-203ENSMUST00000113706 Vrk2Q8BN21 503 aaKnown RBP15.61■□□□□ 0.09
Trim39-203ENSMUST00000113706 Cops7bQ8BV13 264 aa15.61■□□□□ 0.09
Trim39-203ENSMUST00000113706 Trim35Q8C006 501 aa15.61■□□□□ 0.09
Trim39-203ENSMUST00000113706 Tram1l1Q8QZR0 363 aa15.61■□□□□ 0.09
Trim39-203ENSMUST00000113706 Vmn1r206Q8R277 312 aa15.61■□□□□ 0.09
Trim39-203ENSMUST00000113706 Ankra2Q99PE2 312 aa15.61■□□□□ 0.09
Trim39-203ENSMUST00000113706 Habp4Q9JKS5 411 aaKnown RBP15.61■□□□□ 0.09
Trim39-203ENSMUST00000113706 Adam24Q9R160 761 aa15.61■□□□□ 0.09
Trim39-203ENSMUST00000113706 Plxna2P70207 1894 aa15.61■□□□□ 0.09
Trim39-203ENSMUST00000113706 Apol11bE9PUZ0 337 aa15.61■□□□□ 0.09
Trim39-203ENSMUST00000113706 Vmn2r22E9Q7S8 853 aa15.61■□□□□ 0.09
Trim39-203ENSMUST00000113706 Gm8108K7N734 216 aa15.61■□□□□ 0.09
Trim39-203ENSMUST00000113706 Vmn2r57L7N269 863 aa15.61■□□□□ 0.09
Trim39-203ENSMUST00000113706 MrasO08989 208 aa15.61■□□□□ 0.09
Trim39-203ENSMUST00000113706 PtgdsO09114 189 aa15.61■□□□□ 0.09
Trim39-203ENSMUST00000113706 Polr2lP62876 67 aa15.61■□□□□ 0.09
Trim39-203ENSMUST00000113706 QrfprP83861 433 aa15.61■□□□□ 0.09
Trim39-203ENSMUST00000113706 Rbbp7Q60973 425 aaKnown RBP15.61■□□□□ 0.09
Trim39-203ENSMUST00000113706 Ca4Q64444 305 aa15.61■□□□□ 0.09
Trim39-203ENSMUST00000113706 BegainQ68EF6 600 aa15.61■□□□□ 0.09
Trim39-203ENSMUST00000113706 Kirrel2Q7TSU7 700 aa15.61■□□□□ 0.09
Trim39-203ENSMUST00000113706 IpmkQ7TT16 396 aa15.61■□□□□ 0.09
Trim39-203ENSMUST00000113706 Trit1Q80UN9 467 aa15.61■□□□□ 0.09
Trim39-203ENSMUST00000113706 Vmn1r205Q8R276 316 aa15.61■□□□□ 0.09
Trim39-203ENSMUST00000113706 Def8Q99J78 448 aa15.61■□□□□ 0.09
Trim39-203ENSMUST00000113706 Snx2Q9CWK8 519 aa15.61■□□□□ 0.09
Trim39-203ENSMUST00000113706 Q9D112 206 aa15.61■□□□□ 0.09
Trim39-203ENSMUST00000113706 Hormad1Q9D5T7 392 aa15.61■□□□□ 0.09
Trim39-203ENSMUST00000113706 Echdc3Q9D7J9 300 aa15.61■□□□□ 0.09
Trim39-203ENSMUST00000113706 Spry1Q9QXV9 313 aa15.61■□□□□ 0.09
Trim39-203ENSMUST00000113706 Itgb1bp2Q9R000 350 aa15.61■□□□□ 0.09
Trim39-203ENSMUST00000113706 Carm1Q9WVG6 608 aa15.61■□□□□ 0.09
Trim39-203ENSMUST00000113706 PapolbQ9WVP6 641 aa15.61■□□□□ 0.09
Trim39-203ENSMUST00000113706 Gm3147A0A0J9YU88 481 aa15.6■□□□□ 0.09
Trim39-203ENSMUST00000113706 Gm10424A0A0J9YVD0 481 aa15.6■□□□□ 0.09
Trim39-203ENSMUST00000113706 A0A1Y7VP24 259 aa15.6■□□□□ 0.09
Trim39-203ENSMUST00000113706 Tcp10cE9Q046 482 aa15.6■□□□□ 0.09
Trim39-203ENSMUST00000113706 Gm16494E9Q2Z4 87 aa15.6■□□□□ 0.09
Trim39-203ENSMUST00000113706 Gm7971J3QMM8 481 aa15.6■□□□□ 0.09
Trim39-203ENSMUST00000113706 Vmn2r2L7N2E9 908 aa15.6■□□□□ 0.09
Trim39-203ENSMUST00000113706 Vmn2r8L7N472 848 aa15.6■□□□□ 0.09
Trim39-203ENSMUST00000113706 Rgs4O08899 205 aa15.6■□□□□ 0.09
Trim39-203ENSMUST00000113706 Adh5P28474 374 aa15.6■□□□□ 0.09
Trim39-203ENSMUST00000113706 Pou2f3P31362 431 aa15.6■□□□□ 0.09
Trim39-203ENSMUST00000113706 Col6a2Q02788 1034 aa15.6■□□□□ 0.09
Trim39-203ENSMUST00000113706 Slc45a4Q0P5V9 785 aa15.6■□□□□ 0.09
Trim39-203ENSMUST00000113706 Foxk2Q3UCQ1 651 aa15.6■□□□□ 0.09
Trim39-203ENSMUST00000113706 Zzz3Q6KAQ7 910 aa15.6■□□□□ 0.09
Trim39-203ENSMUST00000113706 Coq4Q8BGB8 266 aa15.6■□□□□ 0.09
Trim39-203ENSMUST00000113706 Tyw3Q8BSA9 257 aa15.6■□□□□ 0.09
Trim39-203ENSMUST00000113706 Slc35e2Q8C811 405 aa15.6■□□□□ 0.09
Trim39-203ENSMUST00000113706 Clec4a3Q8JZX6 237 aa15.6■□□□□ 0.09
Trim39-203ENSMUST00000113706 Slc47a1Q8K0H1 567 aa15.6■□□□□ 0.09
Trim39-203ENSMUST00000113706 Spats2lQ91WJ7 558 aaKnown RBP15.6■□□□□ 0.09
Trim39-203ENSMUST00000113706 Pdia5Q921X9 517 aa15.6■□□□□ 0.09
Trim39-203ENSMUST00000113706 Mrpl1Q99N96 336 aaKnown RBP15.6■□□□□ 0.09
Trim39-203ENSMUST00000113706 Ccdc70Q9D9B0 223 aa15.6■□□□□ 0.09
Trim39-203ENSMUST00000113706 P33monoxQ9DBN4 303 aa15.6■□□□□ 0.09
Trim39-203ENSMUST00000113706 MecrQ9DCS3 373 aa15.6■□□□□ 0.09
Trim39-203ENSMUST00000113706 Paqr5Q9DCU0 330 aa15.6■□□□□ 0.09
Trim39-203ENSMUST00000113706 Dnajb1Q9QYJ3 340 aaKnown RBP15.6■□□□□ 0.09
Trim39-203ENSMUST00000113706 Dcun1d1Q9QZ73 259 aa15.6■□□□□ 0.09
Trim39-203ENSMUST00000113706 Arhgap36B1AUC7 590 aa15.6■□□□□ 0.09
Trim39-203ENSMUST00000113706 Olfr292F8VQ84 308 aa15.6■□□□□ 0.09
Trim39-203ENSMUST00000113706 Cyp4a14O35728 507 aa15.6■□□□□ 0.09
Trim39-203ENSMUST00000113706 St3gal5O88829 414 aa15.6■□□□□ 0.09
Trim39-203ENSMUST00000113706 Scube1Q6NZL8 1018 aa15.6■□□□□ 0.09
Trim39-203ENSMUST00000113706 CpmQ80V42 443 aa15.6■□□□□ 0.09
Trim39-203ENSMUST00000113706 Ccdc90bQ8C3X2 256 aa15.6■□□□□ 0.09
Retrieved 100 of 22,080 RNA–protein pairs in 22.9 ms