RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Chit1Q9D7Q1 464 aa22.3■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Olfr706Q9EPF8 316 aa22.3■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Kat2bQ9JHD1 813 aa22.3■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Ptpn4Q9WU22 926 aa22.3■■□□□ 1.16
Scn1b-201ENSMUST00000098548 AicdaQ9WVE0 198 aa22.3■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Mid1O70583 680 aa22.29■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Hnrnph2P70333 449 aaKnown RBP22.29■■□□□ 1.16
Scn1b-201ENSMUST00000098548 CtscP97821 462 aa22.29■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Mocs1Q5RKZ7 636 aa22.29■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Sarm1Q6PDS3 724 aa22.29■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Tmem214Q8BM55 687 aaKnown RBP22.29■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Plekho2Q8K124 495 aa22.29■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Olfr96Q8VFE3 313 aa22.29■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Cyp4f15Q99N18 534 aa22.29■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Gm31371A0A1D5RM70 265 aa22.29■■□□□ 1.16
Scn1b-201ENSMUST00000098548 4930455H04RikD3Z622 58 aa22.29■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Erich1E9PY43 332 aa22.29■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Neurod4O09105 330 aa22.29■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Sod3O09164 251 aa22.29■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Klkb1P26262 638 aa22.29■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Cd36Q08857 472 aa22.29■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Trav8d-2Q5R1B6 112 aa22.29■■□□□ 1.16
Scn1b-201ENSMUST00000098548 CilpQ66K08 1184 aa22.29■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Fndc11Q80WB0 326 aa22.29■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Man2a2Q8BRK9 1152 aa22.29■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Rbbp5Q8BX09 538 aaKnown RBP22.29■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Anapc2Q8BZQ7 837 aa22.29■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Cdkal1Q91WE6 578 aa22.29■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Gbe1Q9D6Y9 702 aa22.29■■□□□ 1.16
Scn1b-201ENSMUST00000098548 HaghlQ9DB32 283 aa22.29■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Gpr45Q9EQQ4 373 aa22.29■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Fbxo47A2A6H3 451 aa22.28■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Btnl6A2CG22 539 aa22.28■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Gm2237E9Q501 211 aa22.28■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Gm3591K7N6X2 186 aa22.28■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Dsg2O55111 1122 aa22.28■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Stc1O55183 247 aa22.28■■□□□ 1.16
Scn1b-201ENSMUST00000098548 WapP01173 134 aa22.28■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Nckap1P28660 1128 aaKnown RBP22.28■■□□□ 1.16
Scn1b-201ENSMUST00000098548 PrtgQ2EY15 1191 aa22.28■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Scrn3Q3TMH2 418 aa22.28■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Fzd4Q61088 537 aa22.28■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Kcna5Q61762 602 aa22.28■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Cndp1Q8BUG2 492 aa22.28■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Lrif1Q8CDD9 755 aa22.28■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Unc5aQ8K1S4 898 aa22.28■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Scara5Q8K299 491 aa22.28■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Olfr1208Q8VG47 308 aa22.28■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Asb18Q8VHA6 467 aa22.28■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Arhgef3Q91X46 524 aa22.28■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Tmem98Q91X86 226 aa22.28■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Pcdhgb5Q91XX5 926 aa22.28■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Cxxc1Q9CWW7 660 aa22.28■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Ccdc130Q9D516 385 aa22.28■■□□□ 1.16
Scn1b-201ENSMUST00000098548 P2yr13Q9D8I2 337 aa22.28■■□□□ 1.16
Scn1b-201ENSMUST00000098548 FancgQ9EQR6 623 aa22.28■■□□□ 1.16
Scn1b-201ENSMUST00000098548 AF366264G3X9P9 502 aa22.27■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Sec22bO08547 215 aaKnown RBP22.27■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Hnrnph1O35737 449 aaKnown RBP22.27■■□□□ 1.16
Scn1b-201ENSMUST00000098548 ZfrO88532 1074 aaKnown RBP22.27■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Inpp1P49442 396 aa22.27■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Pla2g5P97391 137 aa22.27■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Kctd8Q50H33 476 aa22.27■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Capn3Q64691 821 aa22.27■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Ppm1lQ8BHN0 360 aa22.27■■□□□ 1.16
Scn1b-201ENSMUST00000098548 C1raQ8CG16 707 aa22.27■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Olfr398Q8VFY0 314 aa22.27■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Pcdhga9Q91XX9 932 aa22.27■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Txndc12Q9CQU0 170 aa22.27■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Arpc2Q9CVB6 300 aa22.27■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Cep83Q9D5R3 692 aa22.27■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Ifrd2Q9D8U0 441 aa22.27■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Bpifa3Q9D9J8 232 aa22.27■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Olfr704Q9EPF6 315 aa22.27■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Ptk2bQ9QVP9 1009 aa22.27■■□□□ 1.16
Scn1b-201ENSMUST00000098548 Smok3cA0A087WSF2 504 aa22.26■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Tsc22d2E9Q7M2 769 aa22.26■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Eno3P21550 434 aa22.26■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Cxcr2P35343 359 aa22.26■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Pdx1P52946 284 aa22.26■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Ppp2cbP62715 309 aa22.26■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Ppp2caP63330 309 aa22.26■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Itpripl2Q3UV16 535 aa22.26■■□□□ 1.15
Scn1b-201ENSMUST00000098548 PhgdhQ61753 533 aaKnown RBP22.26■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Tlr12Q6QNU9 906 aa22.26■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Lrp10Q7TQH7 713 aa22.26■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Nat14Q8BVG8 206 aa22.26■■□□□ 1.15
Scn1b-201ENSMUST00000098548 PreplQ8C167 725 aa22.26■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Exd1Q8CDF7 570 aa22.26■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Cabcoco1Q8CDT7 208 aa22.26■■□□□ 1.15
Scn1b-201ENSMUST00000098548 P3h2Q8CG71 703 aa22.26■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Nudt4Q8R2U6 179 aa22.26■■□□□ 1.15
Scn1b-201ENSMUST00000098548 EdaraddQ8VHX2 208 aa22.26■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Tmem150aQ91WN2 271 aa22.26■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Prorsd1Q9D820 169 aa22.26■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Ddx59Q9DBN9 619 aa22.26■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Sars2Q9JJL8 518 aa22.26■■□□□ 1.15
Scn1b-201ENSMUST00000098548 IL36RNQ9QYY1 156 aa22.26■■□□□ 1.15
Scn1b-201ENSMUST00000098548 Vmn2r24D3YUI0 854 aa22.25■■□□□ 1.15
Scn1b-201ENSMUST00000098548 BC051665E9Q623 330 aa22.25■■□□□ 1.15
Retrieved 100 of 22,080 RNA–protein pairs in 47.2 ms