RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Dsc2P55292 902 aa22.51■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Nrg2P56974 756 aa22.51■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Dlx3Q64205 287 aa22.51■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Ubtd2Q6PGH0 234 aa22.51■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Trim17Q7TPM3 477 aa22.51■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Tyw3Q8BSA9 257 aa22.51■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Olfr606Q8VGZ8 319 aa22.51■■□□□ 1.19
Upf3a-201ENSMUST00000043767 RalbQ9JIW9 206 aa22.51■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Pcna-ps2A0A140T8V5 261 aa22.51■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Vmn2r24D3YUI0 854 aa22.51■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Prr22F6TNE3 422 aa22.51■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Vmn2r65G3X931 845 aa22.51■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Pik3r2O08908 722 aa22.51■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Stam2O88811 523 aa22.51■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Tk1P04184 233 aa22.51■■□□□ 1.19
Upf3a-201ENSMUST00000043767 PcnaP17918 261 aa22.51■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Cpne9Q1RLL3 553 aa22.51■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Ggt1Q60928 568 aa22.51■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Cspg5Q71M36 566 aa22.51■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Ckap2lQ7TS74 745 aa22.51■■□□□ 1.19
Upf3a-201ENSMUST00000043767 R3hcc1lQ8BJM3 775 aaKnown RBP22.51■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Cers6Q8C172 384 aa22.51■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Ipo13Q8K0C1 963 aa22.51■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Pcdh18Q8VHR0 1134 aa22.51■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Taf11Q99JX1 211 aa22.51■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Nme5Q99MH5 211 aa22.51■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Zfp871G5E905 615 aa22.5■■□□□ 1.19
Upf3a-201ENSMUST00000043767 IkbkgO88522 412 aa22.5■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Mcpt2P15119 244 aa22.5■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Fdft1P53798 416 aa22.5■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Ap2m1P84091 435 aaKnown RBP22.5■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Bop1P97452 732 aaKnown RBP22.5■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Hsf5Q5ND04 624 aa22.5■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Zdhhc20Q5Y5T1 380 aa22.5■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Abhd10Q6PE15 297 aa22.5■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Plin5Q8BVZ1 463 aa22.5■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Acat2Q8CAY6 397 aa22.5■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Sphk1Q8CI15 382 aa22.5■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Hid1Q8R1F6 788 aa22.5■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Q8R1Y2 203 aa22.5■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Fam174aQ9D3L0 190 aa22.5■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Plscr3Q9JIZ9 296 aa22.5■■□□□ 1.19
Upf3a-201ENSMUST00000043767 RngttO55236 597 aa22.5■■□□□ 1.19
Upf3a-201ENSMUST00000043767 PpargP37238 505 aa22.5■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Vps26aP40336 327 aa22.5■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Ezh1P70351 747 aa22.5■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Ext2P70428 718 aa22.5■■□□□ 1.19
Upf3a-201ENSMUST00000043767 QrfprP83861 433 aa22.5■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Stmnd1Q6P3A1 279 aa22.5■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Kiss1Q6Y4S4 130 aa22.5■■□□□ 1.19
Upf3a-201ENSMUST00000043767 LnpepQ8C129 1025 aa22.5■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Q8CIL4 281 aa22.5■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Prdm9Q96EQ9 843 aa22.5■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Itgb1bp2Q9R000 350 aa22.5■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Ccdc194A0A140LIT1 234 aa22.49■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Pknox1O70477 436 aa22.49■■□□□ 1.19
Upf3a-201ENSMUST00000043767 LmnaP48678 665 aaKnown RBP22.49■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Rps14P62264 151 aaKnown RBP22.49■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Tapt1Q4VBD2 564 aa22.49■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Fzd4Q61088 537 aa22.49■■□□□ 1.19
Upf3a-201ENSMUST00000043767 AW551984Q8BGF0 804 aa22.49■■□□□ 1.19
Upf3a-201ENSMUST00000043767 PigwQ8C398 503 aa22.49■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Mrpl47Q8K2Y7 252 aa22.49■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Angptl2Q9R045 493 aa22.49■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Slc25a14Q9Z2B2 325 aa22.49■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Plce1Q8K4S1 2282 aa22.49■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Plxna2P70207 1894 aa22.48■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Gprin2D3Z1D7 455 aa22.48■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Gcm2O09102 504 aa22.48■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Prl3b1P09586 222 aa22.48■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Atp6v0d1P51863 351 aa22.48■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Dnajb14Q149L6 379 aa22.48■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Glb1l2Q3UPY5 636 aa22.48■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Olfr293Q7TS10 336 aa22.48■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Mrgpra2Q91WW4 305 aa22.48■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Pcdhb4Q91XZ6 784 aa22.48■■□□□ 1.19
Upf3a-201ENSMUST00000043767 4930513O06RikQ9D549 161 aa22.48■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Dnajb9Q9QYI6 222 aa22.48■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Akap3O88987 864 aa22.48■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Hoxd12P23812 268 aa22.48■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Fen1P39749 378 aa22.48■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Cyth2P63034 400 aaKnown RBP22.48■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Slc10a2P70172 348 aa22.48■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Sox4Q06831 440 aa22.48■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Sarm1Q6PDS3 724 aa22.48■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Chst10Q6PGK7 356 aa22.48■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Rps27lQ6ZWY3 84 aaKnown RBP22.48■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Hus1Q8BQY8 280 aa22.48■■□□□ 1.19
Upf3a-201ENSMUST00000043767 LctlQ8K1F9 566 aa22.48■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Vmn1r185Q8R299 319 aa22.48■■□□□ 1.19
Upf3a-201ENSMUST00000043767 AspmQ8CJ27 3122 aa22.48■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Lzts3A2AHG0 700 aa22.47■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Gm10800D3Z496 220 aa22.47■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Vmn2r73D3Z7M3 851 aa22.47■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Klf6O08584 283 aa22.47■■□□□ 1.19
Upf3a-201ENSMUST00000043767 LdlrP35951 862 aa22.47■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Ctps2P70303 586 aa22.47■■□□□ 1.19
Upf3a-201ENSMUST00000043767 AcadsQ07417 412 aaKnown RBP22.47■■□□□ 1.19
Upf3a-201ENSMUST00000043767 LcorlQ3U285 600 aa22.47■■□□□ 1.19
Upf3a-201ENSMUST00000043767 Ntrk1Q3UFB7 799 aa22.47■■□□□ 1.19
Retrieved 100 of 22,080 RNA–protein pairs in 65.3 ms