RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Adh6aE9Q5Z6 375 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 2610028H24RikG5E8K1 270 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Limk2O54785 638 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Dnmt3aO88508 908 aaKnown RBP16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Hoxa2P31245 372 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Znf280cQ6P3Y5 742 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Bend6Q6PFX2 281 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Plekhm3Q8BM47 761 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Mptx1Q8R1M8 219 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Zcchc12Q9CZA5 402 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Usp12Q9D9M2 370 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Nek6Q9ES70 313 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 NckipsdQ9ESJ4 714 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Olfr1480A0A140LIR8 359 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Ddi2A2ADY9 399 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Klhl3E0CZ16 587 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Gm17535J3KMR8 224 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Gm3476K7N6V0 257 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Rps14P62264 151 aaKnown RBP16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Znrf3Q5SSZ7 913 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 CbarpQ66L44 698 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Bnip1Q6QD59 228 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 NanogQ80Z64 305 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Trnp1Q80ZI1 223 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Arl5aQ80ZU0 179 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Fzd10Q8BKG4 582 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Gspt1Q8R050 636 aaKnown RBP16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Fam129bQ8R1F1 749 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Slc3a1Q91WV7 685 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Tas1r2Q925I4 843 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Fars2Q99M01 451 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Lgals2Q9CQW5 130 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Q9D979 236 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 CaskO70589 926 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Mkln1O89050 735 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Gh1P06880 216 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 DcnP28654 354 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Polr3bP59470 1133 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Rps24P62849 133 aaKnown RBP16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 H2-Q2Q4KN81 360 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 FaddQ61160 205 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Atg10Q8R1P4 215 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Chid1Q922Q9 393 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 DiabloQ9JIQ3 237 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Tcea2Q9QVN7 299 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Col1a1P11087 1453 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Gm3383J3QQ59 259 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Gm3239L7N2D9 227 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 GnazO70443 355 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Impdh1P50096 514 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Gsk3aQ2NL51 490 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Cd34Q64314 382 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Arhgap20Q6IFT4 1182 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Fam163bQ8BUM6 167 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Gm5591Q8CDK1 855 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Dmtf1Q8CE22 761 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Znf668Q8K2R5 619 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Arl4dQ99PE9 201 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Q9D454 513 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Mrpl17Q9D8P4 176 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Lrrc34Q9DAM1 415 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Osbpl3Q9DBS9 855 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Cngb3Q9JJZ9 694 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Slco1a1Q9QXZ6 670 aa16.38■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Gm14781A2A9Q9 366 aa16.37■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Acp4D3YTS9 425 aa16.37■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 PiggD3Z3Y1 983 aa16.37■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Vmn2r120E9PX34 856 aa16.37■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Kbtbd8Q3UQV5 599 aa16.37■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 PkdccQ5RJI4 492 aa16.37■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Slc25a23Q6GQS1 467 aa16.37■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Dsg4Q7TMD7 1041 aa16.37■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Tmem198Q8BG75 360 aa16.37■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Asb2Q8K0L0 634 aa16.37■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Olfr1311Q8VET0 312 aa16.37■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Arhgap36B1AUC7 590 aa16.37■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Stfa3P35173 103 aa16.37■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 AboP38649 332 aa16.37■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Ruvbl1P60122 456 aaKnown RBP16.37■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Serpina3aQ6P4P1 422 aa16.37■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 IfneQ80ZF2 192 aa16.37■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 PpcdcQ8BZB2 204 aa16.37■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Olfr371Q8VGB8 312 aa16.37■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Ambra1A2AH22 1300 aa16.37■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Gm10717D3Z1I8 228 aa16.37■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 DctP29812 517 aa16.37■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Shox2P70390 331 aa16.37■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Tarbp2P97473 365 aa16.37■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Arrdc3Q7TPQ9 414 aa16.37■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Parp12Q8BZ20 711 aaKnown RBP16.37■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Kat6bQ8BRB7 1872 aa16.37■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Olfr171G5E8J1 314 aa16.36■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Gm3138K7N754 218 aa16.36■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Elk4P41158 430 aa16.36■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Aqp4P55088 323 aa16.36■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Rnf220Q6PDX6 566 aa16.36■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Ttc29Q80VM3 471 aa16.36■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Cers2Q924Z4 380 aa16.36■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 Hspa14Q99M31 509 aa16.36■□□□□ 0.21
Ubfd1-201ENSMUST00000033158 UxtQ9WTZ0 157 aa16.36■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 22.9 ms