RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-233	ENST00000642021	RING1	Q06587	406 aa		13.62	□□□□□ -0.23
PHGDH-233	ENST00000642021	FAM171A1	Q5VUB5	890 aa		13.62	□□□□□ -0.23
PHGDH-233	ENST00000642021	SULT1C3	Q6IMI6	304 aa		13.62	□□□□□ -0.23
PHGDH-233	ENST00000642021	GOLGA7	Q7Z5G4	137 aa		13.62	□□□□□ -0.23
PHGDH-233	ENST00000642021	C2orf69	Q8N8R5	385 aa		13.62	□□□□□ -0.23
PHGDH-233	ENST00000642021	AMBRA1	Q9C0C7	1298 aa		13.62	□□□□□ -0.23
PHGDH-233	ENST00000642021	ING2	Q9H160	280 aa		13.62	□□□□□ -0.23
PHGDH-233	ENST00000642021	MAGEH1	Q9H213	219 aa		13.62	□□□□□ -0.23
PHGDH-233	ENST00000642021	SCUBE2	Q9NQ36	999 aa		13.62	□□□□□ -0.23
PHGDH-233	ENST00000642021	SMPD4	Q9NXE4	827 aa		13.62	□□□□□ -0.23
PHGDH-233	ENST00000642021	GREB1	Q4ZG55	1949 aa		13.62	□□□□□ -0.23
PHGDH-233	ENST00000642021	PLXNA3	P51805	1871 aa		13.62	□□□□□ -0.23
PHGDH-233	ENST00000642021	ANKRD66	B4E2M5	251 aa		13.61	□□□□□ -0.23
PHGDH-233	ENST00000642021		E5RI56	91 aa		13.61	□□□□□ -0.23
PHGDH-233	ENST00000642021	INPPL1	O15357	1258 aa		13.61	□□□□□ -0.23
PHGDH-233	ENST00000642021	BMP1	P13497	986 aa		13.61	□□□□□ -0.23
PHGDH-233	ENST00000642021	CYBA	P13498	195 aa		13.61	□□□□□ -0.23
PHGDH-233	ENST00000642021	CCNA2	P20248	432 aa		13.61	□□□□□ -0.23
PHGDH-233	ENST00000642021	CRHBP	P24387	322 aa		13.61	□□□□□ -0.23
PHGDH-233	ENST00000642021	CA5A	P35218	305 aa		13.61	□□□□□ -0.23
PHGDH-233	ENST00000642021	TTPA	P49638	278 aa		13.61	□□□□□ -0.23
PHGDH-233	ENST00000642021	C21orf59	P57076	290 aa		13.61	□□□□□ -0.23
PHGDH-233	ENST00000642021	PWP1	Q13610	501 aa		13.61	□□□□□ -0.23
PHGDH-233	ENST00000642021	KCNA10	Q16322	511 aa		13.61	□□□□□ -0.23
PHGDH-233	ENST00000642021	IMPG1	Q17R60	797 aa		13.61	□□□□□ -0.23
PHGDH-233	ENST00000642021	RNF19B	Q6ZMZ0	732 aa		13.61	□□□□□ -0.23
PHGDH-233	ENST00000642021	TAS2R42	Q7RTR8	314 aa		13.61	□□□□□ -0.23
PHGDH-233	ENST00000642021	LEMD2	Q8NC56	503 aa		13.61	□□□□□ -0.23
PHGDH-233	ENST00000642021	OR10A6	Q8NH74	314 aa		13.61	□□□□□ -0.23
PHGDH-233	ENST00000642021	LINC01599	Q8WXQ3	324 aa		13.61	□□□□□ -0.23
PHGDH-233	ENST00000642021	KCNJ9	Q92806	393 aa		13.61	□□□□□ -0.23
PHGDH-233	ENST00000642021	BORCS5	Q969J3	196 aa		13.61	□□□□□ -0.23
PHGDH-233	ENST00000642021	EID2B	Q96D98	161 aa		13.61	□□□□□ -0.23
PHGDH-233	ENST00000642021	TUBA1C	Q9BQE3	449 aa		13.61	□□□□□ -0.23
PHGDH-233	ENST00000642021	ZNF711	Q9Y462	761 aa		13.61	□□□□□ -0.23
PHGDH-233	ENST00000642021	CCL27	Q9Y4X3	112 aa		13.61	□□□□□ -0.23
PHGDH-233	ENST00000642021	ANKRD36	A6QL64	1941 aa		13.61	□□□□□ -0.23
PHGDH-233	ENST00000642021	IQCA1L	A6NCM1	817 aa		13.61	□□□□□ -0.23
PHGDH-233	ENST00000642021	CBX4	O00257	560 aa		13.61	□□□□□ -0.23
PHGDH-233	ENST00000642021	HTR1A	P08908	422 aa		13.61	□□□□□ -0.23
PHGDH-233	ENST00000642021	NR4A1	P22736	598 aa		13.61	□□□□□ -0.23
PHGDH-233	ENST00000642021	MAP4	P27816	1152 aa	Known RBP	13.61	□□□□□ -0.23
PHGDH-233	ENST00000642021	OXCT1	P55809	520 aa		13.61	□□□□□ -0.23
PHGDH-233	ENST00000642021	CHRNB3	Q05901	458 aa		13.61	□□□□□ -0.23
PHGDH-233	ENST00000642021	MEP1A	Q16819	746 aa		13.61	□□□□□ -0.23
PHGDH-233	ENST00000642021	GTF2IRD2B	Q6EKJ0	949 aa		13.61	□□□□□ -0.23
PHGDH-233	ENST00000642021	SBSN	Q6UWP8	590 aa		13.61	□□□□□ -0.23
PHGDH-233	ENST00000642021	LINGO4	Q6UY18	593 aa		13.61	□□□□□ -0.23
PHGDH-233	ENST00000642021	THAP5	Q7Z6K1	395 aa		13.61	□□□□□ -0.23
PHGDH-233	ENST00000642021	GTF2IRD2	Q86UP8	949 aa		13.61	□□□□□ -0.23
PHGDH-233	ENST00000642021	SYT17	Q9BSW7	474 aa		13.61	□□□□□ -0.23
PHGDH-233	ENST00000642021	TBC1D23	Q9NUY8	699 aa		13.61	□□□□□ -0.23
PHGDH-233	ENST00000642021	AGO1	Q9UL18	857 aa	Known RBP	13.61	□□□□□ -0.23
PHGDH-233	ENST00000642021	MTMR11	A4FU01	709 aa		13.6	□□□□□ -0.23
PHGDH-233	ENST00000642021	STX7	O15400	261 aa	Known RBP	13.6	□□□□□ -0.23
PHGDH-233	ENST00000642021	KDELR3	O43731	214 aa		13.6	□□□□□ -0.23
PHGDH-233	ENST00000642021	ACSL4	O60488	711 aa		13.6	□□□□□ -0.23
PHGDH-233	ENST00000642021	TULP3	O75386	442 aa		13.6	□□□□□ -0.23
PHGDH-233	ENST00000642021	JUNB	P17275	347 aa	Predicted RBP	13.6	□□□□□ -0.23
PHGDH-233	ENST00000642021	GDF5	P43026	501 aa		13.6	□□□□□ -0.23
PHGDH-233	ENST00000642021	DUSP4	Q13115	394 aa		13.6	□□□□□ -0.23
PHGDH-233	ENST00000642021	C5orf22	Q49AR2	442 aa		13.6	□□□□□ -0.23
PHGDH-233	ENST00000642021	FAM98B	Q52LJ0	330 aa	Known RBP	13.6	□□□□□ -0.23
PHGDH-233	ENST00000642021	LAIR2	Q6ISS4	152 aa		13.6	□□□□□ -0.23
PHGDH-233	ENST00000642021	PNPT1	Q8TCS8	783 aa	Known RBP	13.6	□□□□□ -0.23
PHGDH-233	ENST00000642021	TRIB2	Q92519	343 aa		13.6	□□□□□ -0.23
PHGDH-233	ENST00000642021	MBOAT4	Q96T53	435 aa		13.6	□□□□□ -0.23
PHGDH-233	ENST00000642021	C17orf80	Q9BSJ5	609 aa		13.6	□□□□□ -0.23
PHGDH-233	ENST00000642021	TBCD	Q9BTW9	1192 aa		13.6	□□□□□ -0.23
PHGDH-233	ENST00000642021	NSUN3	Q9H649	340 aa	Known RBP	13.6	□□□□□ -0.23
PHGDH-233	ENST00000642021	PFDN4	Q9NQP4	134 aa		13.6	□□□□□ -0.23
PHGDH-233	ENST00000642021	FARSB	Q9NSD9	589 aa	Known RBP	13.6	□□□□□ -0.23
PHGDH-233	ENST00000642021	TBCCD1	Q9NVR7	557 aa		13.6	□□□□□ -0.23
PHGDH-233	ENST00000642021	FAM118A	Q9NWS6	357 aa		13.6	□□□□□ -0.23
PHGDH-233	ENST00000642021		G3V2T6	193 aa		13.6	□□□□□ -0.23
PHGDH-233	ENST00000642021	ADAMTS4	O75173	837 aa		13.6	□□□□□ -0.23
PHGDH-233	ENST00000642021	GJB5	O95377	273 aa		13.6	□□□□□ -0.23
PHGDH-233	ENST00000642021	GUCA1C	O95843	209 aa		13.6	□□□□□ -0.23
PHGDH-233	ENST00000642021	SLC2A4	P14672	509 aa		13.6	□□□□□ -0.23
PHGDH-233	ENST00000642021	ITGB6	P18564	788 aa		13.6	□□□□□ -0.23
PHGDH-233	ENST00000642021	PRKACG	P22612	351 aa		13.6	□□□□□ -0.23
PHGDH-233	ENST00000642021	CLCN4	P51793	760 aa		13.6	□□□□□ -0.23
PHGDH-233	ENST00000642021	TMBIM6	P55061	237 aa		13.6	□□□□□ -0.23
PHGDH-233	ENST00000642021	FKBP1B	P68106	108 aa		13.6	□□□□□ -0.23
PHGDH-233	ENST00000642021	GTF2H2	Q13888	395 aa		13.6	□□□□□ -0.23
PHGDH-233	ENST00000642021	MRPL58	Q14197	206 aa	Known RBP	13.6	□□□□□ -0.23
PHGDH-233	ENST00000642021	TRIM71	Q2Q1W2	868 aa	Known RBP	13.6	□□□□□ -0.23
PHGDH-233	ENST00000642021	CTU2	Q2VPK5	515 aa	Known RBP	13.6	□□□□□ -0.23
PHGDH-233	ENST00000642021	BROX	Q5VW32	411 aa		13.6	□□□□□ -0.23
PHGDH-233	ENST00000642021	GTF2H2C	Q6P1K8	395 aa		13.6	□□□□□ -0.23
PHGDH-233	ENST00000642021	RBM23	Q86U06	439 aa	Known RBP	13.6	□□□□□ -0.23
PHGDH-233	ENST00000642021	ZDHHC13	Q8IUH4	622 aa		13.6	□□□□□ -0.23
PHGDH-233	ENST00000642021	MSRB3	Q8IXL7	192 aa		13.6	□□□□□ -0.23
PHGDH-233	ENST00000642021	SPART	Q8N0X7	666 aa		13.6	□□□□□ -0.23
PHGDH-233	ENST00000642021	TTC30B	Q8N4P2	665 aa		13.6	□□□□□ -0.23
PHGDH-233	ENST00000642021	SLC15A4	Q8N697	577 aa		13.6	□□□□□ -0.23
PHGDH-233	ENST00000642021	OR2T12	Q8NG77	320 aa		13.6	□□□□□ -0.23
PHGDH-233	ENST00000642021	GTF2H4	Q92759	462 aa		13.6	□□□□□ -0.23
PHGDH-233	ENST00000642021	CNDP2	Q96KP4	475 aa	Known RBP	13.6	□□□□□ -0.23
PHGDH-233	ENST00000642021	THUMPD3	Q9BV44	507 aa	Known RBP	13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms