RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 ZDHHC3Q9NYG2 299 aa9.27□□□□□ -0.93
PHGDH-228ENST00000641847 CTNNAL1Q9UBT7 734 aa9.27□□□□□ -0.93
PHGDH-228ENST00000641847 FBXO5Q9UKT4 447 aa9.27□□□□□ -0.93
PHGDH-228ENST00000641847 TMPRSS11EQ9UL52 423 aa9.27□□□□□ -0.93
PHGDH-228ENST00000641847 PCDHB1Q9Y5F3 818 aa9.27□□□□□ -0.93
PHGDH-228ENST00000641847 NBPF19A0A087WUL8 3843 aa9.27□□□□□ -0.93
PHGDH-228ENST00000641847 TLN1Q9Y490 2541 aaKnown RBP9.27□□□□□ -0.93
PHGDH-228ENST00000641847 UBA6A0AVT1 1052 aaPredicted RBP9.26□□□□□ -0.93
PHGDH-228ENST00000641847 TLDC2A0PJX2 215 aa9.26□□□□□ -0.93
PHGDH-228ENST00000641847 AGAP14A8MT82 685 aa9.26□□□□□ -0.93
PHGDH-228ENST00000641847 RASGRF2O14827 1237 aa9.26□□□□□ -0.93
PHGDH-228ENST00000641847 OR1I1O60431 355 aa9.26□□□□□ -0.93
PHGDH-228ENST00000641847 NDUFS3O75489 264 aa9.26□□□□□ -0.93
PHGDH-228ENST00000641847 S1PR4O95977 384 aa9.26□□□□□ -0.93
PHGDH-228ENST00000641847 TEAD1P28347 426 aa9.26□□□□□ -0.93
PHGDH-228ENST00000641847 GABRB3P28472 473 aa9.26□□□□□ -0.93
PHGDH-228ENST00000641847 AKT1P31749 480 aa9.26□□□□□ -0.93
PHGDH-228ENST00000641847 PPARGP37231 505 aaPredicted RBP9.26□□□□□ -0.93
PHGDH-228ENST00000641847 LEPRP48357 1165 aaKnown RBP9.26□□□□□ -0.93
PHGDH-228ENST00000641847 LIMK2P53671 638 aa9.26□□□□□ -0.93
PHGDH-228ENST00000641847 CDK3Q00526 305 aa9.26□□□□□ -0.93
PHGDH-228ENST00000641847 BMPR2Q13873 1038 aa9.26□□□□□ -0.93
PHGDH-228ENST00000641847 INPP5AQ14642 412 aa9.26□□□□□ -0.93
PHGDH-228ENST00000641847 ZNF789Q5FWF6 425 aa9.26□□□□□ -0.93
PHGDH-228ENST00000641847 GRTP1Q5TC63 336 aa9.26□□□□□ -0.93
PHGDH-228ENST00000641847 PNCKQ6P2M8 343 aa9.26□□□□□ -0.93
PHGDH-228ENST00000641847 TRIM74Q86UV6 250 aa9.26□□□□□ -0.93
PHGDH-228ENST00000641847 ZC3HC1Q86WB0 502 aaKnown RBP9.26□□□□□ -0.93
PHGDH-228ENST00000641847 TDRPQ86YL5 185 aa9.26□□□□□ -0.93
PHGDH-228ENST00000641847 RBFAQ8N0V3 343 aa9.26□□□□□ -0.93
PHGDH-228ENST00000641847 RIBC1Q8N443 379 aaPredicted RBP9.26□□□□□ -0.93
PHGDH-228ENST00000641847 DDHD1Q8NEL9 900 aa9.26□□□□□ -0.93
PHGDH-228ENST00000641847 GDAP1Q8TB36 358 aa9.26□□□□□ -0.93
PHGDH-228ENST00000641847 BTN2A2Q8WVV5 523 aa9.26□□□□□ -0.93
PHGDH-228ENST00000641847 LPGAT1Q92604 370 aa9.26□□□□□ -0.93
PHGDH-228ENST00000641847 CENPTQ96BT3 561 aa9.26□□□□□ -0.93
PHGDH-228ENST00000641847 GRAMD1AQ96CP6 724 aa9.26□□□□□ -0.93
PHGDH-228ENST00000641847 VPS39Q96JC1 886 aa9.26□□□□□ -0.93
PHGDH-228ENST00000641847 SERAC1Q96JX3 654 aa9.26□□□□□ -0.93
PHGDH-228ENST00000641847 LENG8Q96PV6 779 aaPredicted RBP9.26□□□□□ -0.93
PHGDH-228ENST00000641847 TCF12Q99081 682 aa9.26□□□□□ -0.93
PHGDH-228ENST00000641847 KLF6Q99612 283 aaPredicted RBP9.26□□□□□ -0.93
PHGDH-228ENST00000641847 COPS8Q99627 209 aa9.26□□□□□ -0.93
PHGDH-228ENST00000641847 RBBP8Q99708 897 aa9.26□□□□□ -0.93
PHGDH-228ENST00000641847 TMEM109Q9BVC6 243 aa9.26□□□□□ -0.93
PHGDH-228ENST00000641847 ROPN1BQ9BZX4 212 aaPredicted RBP9.26□□□□□ -0.93
PHGDH-228ENST00000641847 RHOJQ9H4E5 214 aa9.26□□□□□ -0.93
PHGDH-228ENST00000641847 WDR26Q9H7D7 661 aa9.26□□□□□ -0.93
PHGDH-228ENST00000641847 ROPN1Q9HAT0 212 aaPredicted RBP9.26□□□□□ -0.93
PHGDH-228ENST00000641847 TBK1Q9UHD2 729 aa9.26□□□□□ -0.93
PHGDH-228ENST00000641847 ZNF180Q9UJW8 692 aa9.26□□□□□ -0.93
PHGDH-228ENST00000641847 CNOT6Q9ULM6 557 aaKnown RBP9.26□□□□□ -0.93
PHGDH-228ENST00000641847 DMTF1Q9Y222 760 aa9.26□□□□□ -0.93
PHGDH-228ENST00000641847 VPS9D1Q9Y2B5 631 aa9.26□□□□□ -0.93
PHGDH-228ENST00000641847 CA5BQ9Y2D0 317 aa9.26□□□□□ -0.93
PHGDH-228ENST00000641847 OR1A2Q9Y585 309 aa9.26□□□□□ -0.93
PHGDH-228ENST00000641847 IGLV3-16A0A075B6K0 115 aa9.25□□□□□ -0.93
PHGDH-228ENST00000641847 IQANK1A0A1B0GTG1 560 aa9.25□□□□□ -0.93
PHGDH-228ENST00000641847 GOLGA6L10A6NI86 522 aa9.25□□□□□ -0.93
PHGDH-228ENST00000641847 CFAP99D6REC4 459 aa9.25□□□□□ -0.93
PHGDH-228ENST00000641847 AGPSO00116 658 aa9.25□□□□□ -0.93
PHGDH-228ENST00000641847 FPGTO14772 594 aa9.25□□□□□ -0.93
PHGDH-228ENST00000641847 SUV39H1O43463 412 aa9.25□□□□□ -0.93
PHGDH-228ENST00000641847 ATP8B1O43520 1251 aa9.25□□□□□ -0.93
PHGDH-228ENST00000641847 CDH16O75309 829 aa9.25□□□□□ -0.93
PHGDH-228ENST00000641847 CSO75390 466 aaKnown RBP9.25□□□□□ -0.93
PHGDH-228ENST00000641847 MTX2O75431 263 aa9.25□□□□□ -0.93
PHGDH-228ENST00000641847 HAUS5O94927 633 aa9.25□□□□□ -0.93
PHGDH-228ENST00000641847 SLC25A14O95258 325 aaPredicted RBP9.25□□□□□ -0.93
PHGDH-228ENST00000641847 AHSGP02765 367 aa9.25□□□□□ -0.93
PHGDH-228ENST00000641847 ITGB2P05107 769 aa9.25□□□□□ -0.93
PHGDH-228ENST00000641847 ITGA2BP08514 1039 aa9.25□□□□□ -0.93
PHGDH-228ENST00000641847 MYZAPP0CAP1 466 aa9.25□□□□□ -0.93
PHGDH-228ENST00000641847 ALPPL2P10696 532 aa9.25□□□□□ -0.93
PHGDH-228ENST00000641847 MYF5P13349 255 aa9.25□□□□□ -0.93
PHGDH-228ENST00000641847 ZNF7P17097 686 aaPredicted RBP9.25□□□□□ -0.93
PHGDH-228ENST00000641847 MSH3P20585 1137 aa9.25□□□□□ -0.93
PHGDH-228ENST00000641847 SPRP35270 261 aaPredicted RBP9.25□□□□□ -0.93
PHGDH-228ENST00000641847 NUDT1P36639 197 aa9.25□□□□□ -0.93
PHGDH-228ENST00000641847 SERPINB9P50453 376 aa9.25□□□□□ -0.93
PHGDH-228ENST00000641847 DUSP3P51452 185 aaPredicted RBP9.25□□□□□ -0.93
PHGDH-228ENST00000641847 CLDN2P57739 230 aa9.25□□□□□ -0.93
PHGDH-228ENST00000641847 NXPH1P58417 271 aa9.25□□□□□ -0.93
PHGDH-228ENST00000641847 B4GALNT1Q00973 533 aa9.25□□□□□ -0.93
PHGDH-228ENST00000641847 OVGP1Q12889 678 aa9.25□□□□□ -0.93
PHGDH-228ENST00000641847 BNIP3Q12983 259 aa9.25□□□□□ -0.93
PHGDH-228ENST00000641847 RASA2Q15283 850 aa9.25□□□□□ -0.93
PHGDH-228ENST00000641847 SHBQ15464 509 aa9.25□□□□□ -0.93
PHGDH-228ENST00000641847 PROX2Q3B8N5 592 aa9.25□□□□□ -0.93
PHGDH-228ENST00000641847 KHDC1Q4VXA5 237 aaKnown RBP9.25□□□□□ -0.93
PHGDH-228ENST00000641847 LDLRAP1Q5SW96 308 aa9.25□□□□□ -0.93
PHGDH-228ENST00000641847 RBM20Q5T481 1227 aaKnown RBP9.25□□□□□ -0.93
PHGDH-228ENST00000641847 ZNF648Q5T619 568 aaPredicted RBP9.25□□□□□ -0.93
PHGDH-228ENST00000641847 CNSTQ6PJW8 725 aa9.25□□□□□ -0.93
PHGDH-228ENST00000641847 DOK6Q6PKX4 331 aa9.25□□□□□ -0.93
PHGDH-228ENST00000641847 ADGRD1Q6QNK2 874 aa9.25□□□□□ -0.93
PHGDH-228ENST00000641847 IGF2-ASQ6U949 168 aa9.25□□□□□ -0.93
PHGDH-228ENST00000641847 GCNT7Q6ZNI0 430 aa9.25□□□□□ -0.93
PHGDH-228ENST00000641847 CROCCP2Q86T23 111 aa9.25□□□□□ -0.93
PHGDH-228ENST00000641847 ARL14Q8N4G2 192 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms