RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 PCSK2P16519 638 aa17.32■□□□□ 0.36
SCARB2-223ENST00000640640 SLC26A3P40879 764 aa17.32■□□□□ 0.36
SCARB2-223ENST00000640640 PTPRCAPQ14761 206 aa17.32■□□□□ 0.36
SCARB2-223ENST00000640640 VN1R5Q7Z5H4 357 aa17.32■□□□□ 0.36
SCARB2-223ENST00000640640 ARMC8Q8IUR7 673 aa17.32■□□□□ 0.36
SCARB2-223ENST00000640640 UMODL1-AS1Q8N2C9 162 aa17.32■□□□□ 0.36
SCARB2-223ENST00000640640 RERGQ96A58 199 aaPredicted RBP17.32■□□□□ 0.36
SCARB2-223ENST00000640640 RAD51AP1Q96B01 352 aa17.32■□□□□ 0.36
SCARB2-223ENST00000640640 NUAK2Q9H093 628 aa17.32■□□□□ 0.36
SCARB2-223ENST00000640640 CCDC189A1A4V9 331 aa17.32■□□□□ 0.36
SCARB2-223ENST00000640640 IL6P05231 212 aa17.32■□□□□ 0.36
SCARB2-223ENST00000640640 ITGAXP20702 1163 aa17.32■□□□□ 0.36
SCARB2-223ENST00000640640 RPS9P46781 194 aaKnown RBP17.32■□□□□ 0.36
SCARB2-223ENST00000640640 AQP4P55087 323 aa17.32■□□□□ 0.36
SCARB2-223ENST00000640640 CCDC157Q569K6 752 aa17.32■□□□□ 0.36
SCARB2-223ENST00000640640 RNF220Q5VTB9 566 aa17.32■□□□□ 0.36
SCARB2-223ENST00000640640 EPGNQ6UW88 154 aa17.32■□□□□ 0.36
SCARB2-223ENST00000640640 CHMP1BQ7LBR1 199 aa17.32■□□□□ 0.36
SCARB2-223ENST00000640640 PHC3Q8NDX5 983 aa17.32■□□□□ 0.36
SCARB2-223ENST00000640640 FCRL3Q96P31 734 aaPredicted RBP17.32■□□□□ 0.36
SCARB2-223ENST00000640640 MCMBPQ9BTE3 642 aa17.32■□□□□ 0.36
SCARB2-223ENST00000640640 CLN6Q9NWW5 311 aa17.32■□□□□ 0.36
SCARB2-223ENST00000640640 SH3GLB1Q9Y371 365 aa17.32■□□□□ 0.36
SCARB2-223ENST00000640640 MBLAC1A4D2B0 266 aaPredicted RBP17.32■□□□□ 0.36
SCARB2-223ENST00000640640 SLC28A2O43868 658 aa17.32■□□□□ 0.36
SCARB2-223ENST00000640640 NUDT14O95848 222 aa17.32■□□□□ 0.36
SCARB2-223ENST00000640640 BUD31P41223 144 aaPredicted RBP17.32■□□□□ 0.36
SCARB2-223ENST00000640640 CHRNA6Q15825 494 aa17.32■□□□□ 0.36
SCARB2-223ENST00000640640 SAPCD2Q86UD0 394 aa17.32■□□□□ 0.36
SCARB2-223ENST00000640640 HIPK1Q86Z02 1210 aa17.32■□□□□ 0.36
SCARB2-223ENST00000640640 C2CD4AQ8NCU7 369 aaPredicted RBP17.32■□□□□ 0.36
SCARB2-223ENST00000640640 ZDHHC3Q9NYG2 299 aa17.32■□□□□ 0.36
SCARB2-223ENST00000640640 FBXL21Q9UKT6 434 aa17.32■□□□□ 0.36
SCARB2-223ENST00000640640 LYVE1Q9Y5Y7 322 aa17.32■□□□□ 0.36
SCARB2-223ENST00000640640 MYO18AQ92614 2054 aaKnown RBP17.32■□□□□ 0.36
SCARB2-223ENST00000640640 BTAF1O14981 1849 aa17.32■□□□□ 0.36
SCARB2-223ENST00000640640 KDELR3O43731 214 aa17.32■□□□□ 0.36
SCARB2-223ENST00000640640 XRCC1P18887 633 aaPredicted RBP17.32■□□□□ 0.36
SCARB2-223ENST00000640640 GSCP56915 257 aaPredicted RBP17.32■□□□□ 0.36
SCARB2-223ENST00000640640 ZNHIT3Q15649 155 aaPredicted RBP17.32■□□□□ 0.36
SCARB2-223ENST00000640640 TMC5Q6UXY8 1006 aa17.32■□□□□ 0.36
SCARB2-223ENST00000640640 OR14C36Q8NHC7 312 aa17.32■□□□□ 0.36
SCARB2-223ENST00000640640 MTERF1Q99551 399 aaKnown RBP17.32■□□□□ 0.36
SCARB2-223ENST00000640640 EBPLQ9BY08 206 aa17.32■□□□□ 0.36
SCARB2-223ENST00000640640 TXLNGYQ9BZA5 131 aa17.32■□□□□ 0.36
SCARB2-223ENST00000640640 MATN2O00339 956 aa17.31■□□□□ 0.36
SCARB2-223ENST00000640640 SCELO95171 688 aa17.31■□□□□ 0.36
SCARB2-223ENST00000640640 CLDN7O95471 211 aa17.31■□□□□ 0.36
SCARB2-223ENST00000640640 CCR3P51677 355 aa17.31■□□□□ 0.36
SCARB2-223ENST00000640640 RING1Q06587 406 aa17.31■□□□□ 0.36
SCARB2-223ENST00000640640 SIM2Q14190 667 aaPredicted RBP17.31■□□□□ 0.36
SCARB2-223ENST00000640640 LIN52Q52LA3 116 aa17.31■□□□□ 0.36
SCARB2-223ENST00000640640 TMEM135Q86UB9 458 aa17.31■□□□□ 0.36
SCARB2-223ENST00000640640 MYDGFQ969H8 173 aa17.31■□□□□ 0.36
SCARB2-223ENST00000640640 C11orf84Q9BUA3 381 aaPredicted RBP17.31■□□□□ 0.36
SCARB2-223ENST00000640640 ARHGAP39Q9C0H5 1083 aa17.31■□□□□ 0.36
SCARB2-223ENST00000640640 KLHL25Q9H0H3 589 aa17.31■□□□□ 0.36
SCARB2-223ENST00000640640 GON4LQ3T8J9 2241 aa17.31■□□□□ 0.36
SCARB2-223ENST00000640640 RBM47A0AV96 593 aaKnown RBP17.31■□□□□ 0.36
SCARB2-223ENST00000640640 FAM234BA2RU67 622 aa17.31■□□□□ 0.36
SCARB2-223ENST00000640640 FGF3P11487 239 aaPredicted RBP17.31■□□□□ 0.36
SCARB2-223ENST00000640640 MTPNP58546 118 aa17.31■□□□□ 0.36
SCARB2-223ENST00000640640 HMGCS1Q01581 520 aa17.31■□□□□ 0.36
SCARB2-223ENST00000640640 C9orf64Q5T6V5 341 aa17.31■□□□□ 0.36
SCARB2-223ENST00000640640 DEF8Q6ZN54 512 aa17.31■□□□□ 0.36
SCARB2-223ENST00000640640 DCAF4L2Q8NA75 395 aa17.31■□□□□ 0.36
SCARB2-223ENST00000640640 C11orf65Q8NCR3 313 aa17.31■□□□□ 0.36
SCARB2-223ENST00000640640 WDR36Q8NI36 951 aaKnown RBP17.31■□□□□ 0.36
SCARB2-223ENST00000640640 ERVW-1Q9UQF0 538 aa17.31■□□□□ 0.36
SCARB2-223ENST00000640640 INSL6Q9Y581 213 aa17.31■□□□□ 0.36
SCARB2-223ENST00000640640 INSL5Q9Y5Q6 135 aa17.31■□□□□ 0.36
SCARB2-223ENST00000640640 ZNF780BQ9Y6R6 833 aa17.31■□□□□ 0.36
SCARB2-223ENST00000640640 LCHNA4D1U4 455 aa17.31■□□□□ 0.36
SCARB2-223ENST00000640640 COPZ1P61923 177 aa17.31■□□□□ 0.36
SCARB2-223ENST00000640640 ADGRE1Q14246 886 aa17.31■□□□□ 0.36
SCARB2-223ENST00000640640 GDPD4Q6W3E5 623 aa17.31■□□□□ 0.36
SCARB2-223ENST00000640640 AMER2Q8N7J2 671 aa17.31■□□□□ 0.36
SCARB2-223ENST00000640640 WDR60Q8WVS4 1066 aa17.31■□□□□ 0.36
SCARB2-223ENST00000640640 FNDC11Q9BVV2 318 aa17.31■□□□□ 0.36
SCARB2-223ENST00000640640 MRM3Q9HC36 420 aaKnown RBP17.31■□□□□ 0.36
SCARB2-223ENST00000640640 SOHLH2Q9NX45 425 aa17.31■□□□□ 0.36
SCARB2-223ENST00000640640 RUVBL1Q9Y265 456 aaKnown RBP17.31■□□□□ 0.36
SCARB2-223ENST00000640640 AHCYL1O43865 530 aa17.3■□□□□ 0.36
SCARB2-223ENST00000640640 OR10H2O60403 315 aa17.3■□□□□ 0.36
SCARB2-223ENST00000640640 TULP3O75386 442 aa17.3■□□□□ 0.36
SCARB2-223ENST00000640640 UGT2B15P54855 530 aa17.3■□□□□ 0.36
SCARB2-223ENST00000640640 ADARP55265 1226 aaKnown RBP17.3■□□□□ 0.36
SCARB2-223ENST00000640640 LDLRAP1Q5SW96 308 aa17.3■□□□□ 0.36
SCARB2-223ENST00000640640 Q6ZVU0 165 aa17.3■□□□□ 0.36
SCARB2-223ENST00000640640 XAGE5Q8WWM1 108 aa17.3■□□□□ 0.36
SCARB2-223ENST00000640640 PAWRQ96IZ0 340 aaKnown RBP17.3■□□□□ 0.36
SCARB2-223ENST00000640640 Q96MT0 163 aa17.3■□□□□ 0.36
SCARB2-223ENST00000640640 CNOT6Q9ULM6 557 aaKnown RBP17.3■□□□□ 0.36
SCARB2-223ENST00000640640 AP3D1O14617 1153 aa17.3■□□□□ 0.36
SCARB2-223ENST00000640640 IFNA16P05015 189 aa17.3■□□□□ 0.36
SCARB2-223ENST00000640640 MAGEA10P43363 369 aaPredicted RBP17.3■□□□□ 0.36
SCARB2-223ENST00000640640 IRF5Q13568 498 aa17.3■□□□□ 0.36
SCARB2-223ENST00000640640 CYS1Q717R9 158 aa17.3■□□□□ 0.36
SCARB2-223ENST00000640640 TMEM174Q8WUU8 243 aa17.3■□□□□ 0.36
SCARB2-223ENST00000640640 EEF1AKMT1Q8WVE0 214 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms