RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 AGAP9Q5VTM2 703 aa12.93□□□□□ -0.34
GTF3A-209ENST00000640289 ABRAXAS1Q6UWZ7 409 aa12.93□□□□□ -0.34
GTF3A-209ENST00000640289 WASH2PQ6VEQ5 465 aa12.93□□□□□ -0.34
GTF3A-209ENST00000640289 CCNI2Q6ZMN8 369 aaPredicted RBP12.93□□□□□ -0.34
GTF3A-209ENST00000640289 CYS1Q717R9 158 aa12.93□□□□□ -0.34
GTF3A-209ENST00000640289 STRA8Q7Z7C7 330 aa12.93□□□□□ -0.34
GTF3A-209ENST00000640289 VRK3Q8IV63 474 aa12.93□□□□□ -0.34
GTF3A-209ENST00000640289 CTAGE3PQ8IX95 158 aa12.93□□□□□ -0.34
GTF3A-209ENST00000640289 UHMK1Q8TAS1 419 aaKnown RBP12.93□□□□□ -0.34
GTF3A-209ENST00000640289 MAPK15Q8TD08 544 aa12.93□□□□□ -0.34
GTF3A-209ENST00000640289 ATXN7L3BQ96GX2 97 aa12.93□□□□□ -0.34
GTF3A-209ENST00000640289 RMDN2Q96LZ7 410 aa12.93□□□□□ -0.34
GTF3A-209ENST00000640289 PANX3Q96QZ0 392 aa12.93□□□□□ -0.34
GTF3A-209ENST00000640289 INSM2Q96T92 566 aaPredicted RBP12.93□□□□□ -0.34
GTF3A-209ENST00000640289 SLC30A3Q99726 388 aa12.93□□□□□ -0.34
GTF3A-209ENST00000640289 AARSD1Q9BTE6 412 aaKnown RBP12.93□□□□□ -0.34
GTF3A-209ENST00000640289 TSSK1BQ9BXA7 367 aa12.93□□□□□ -0.34
GTF3A-209ENST00000640289 OR52A5Q9H2C5 316 aa12.93□□□□□ -0.34
GTF3A-209ENST00000640289 CCDC68Q9H2F9 335 aa12.93□□□□□ -0.34
GTF3A-209ENST00000640289 WASH6PQ9NQA3 447 aa12.93□□□□□ -0.34
GTF3A-209ENST00000640289 TOR4AQ9NXH8 423 aa12.93□□□□□ -0.34
GTF3A-209ENST00000640289 ZNF624Q9P2J8 865 aaPredicted RBP12.93□□□□□ -0.34
GTF3A-209ENST00000640289 RABGEF1Q9UJ41 708 aa12.93□□□□□ -0.34
GTF3A-209ENST00000640289 CFAP20Q9Y6A4 193 aaKnown RBP12.93□□□□□ -0.34
GTF3A-209ENST00000640289 RNF215Q9Y6U7 377 aa12.93□□□□□ -0.34
GTF3A-209ENST00000640289 ASCC3Q8N3C0 2202 aaKnown RBP12.92□□□□□ -0.34
GTF3A-209ENST00000640289 KLHL33A6NCF5 533 aa12.92□□□□□ -0.34
GTF3A-209ENST00000640289 E5RI56 91 aa12.92□□□□□ -0.34
GTF3A-209ENST00000640289 F8W8V4 182 aa12.92□□□□□ -0.34
GTF3A-209ENST00000640289 H3BMM5 538 aa12.92□□□□□ -0.34
GTF3A-209ENST00000640289 PPM1DO15297 605 aa12.92□□□□□ -0.34
GTF3A-209ENST00000640289 SPAG6O75602 509 aa12.92□□□□□ -0.34
GTF3A-209ENST00000640289 GSTM1P09488 218 aa12.92□□□□□ -0.34
GTF3A-209ENST00000640289 SLC2A4P14672 509 aa12.92□□□□□ -0.34
GTF3A-209ENST00000640289 ACP1P24666 158 aa12.92□□□□□ -0.34
GTF3A-209ENST00000640289 SLC19A1P41440 591 aa12.92□□□□□ -0.34
GTF3A-209ENST00000640289 ID4P47928 161 aa12.92□□□□□ -0.34
GTF3A-209ENST00000640289 RPIAP49247 311 aa12.92□□□□□ -0.34
GTF3A-209ENST00000640289 PGGT1BP53609 377 aa12.92□□□□□ -0.34
GTF3A-209ENST00000640289 SIM1P81133 766 aaPredicted RBP12.92□□□□□ -0.34
GTF3A-209ENST00000640289 GSTM4Q03013 218 aa12.92□□□□□ -0.34
GTF3A-209ENST00000640289 HSPA14Q0VDF9 509 aa12.92□□□□□ -0.34
GTF3A-209ENST00000640289 DUS1LQ6P1R4 473 aaKnown RBP12.92□□□□□ -0.34
GTF3A-209ENST00000640289 ZNF449Q6P9G9 518 aa12.92□□□□□ -0.34
GTF3A-209ENST00000640289 EFL1Q7Z2Z2 1120 aaKnown RBP12.92□□□□□ -0.34
GTF3A-209ENST00000640289 GALNT7Q86SF2 657 aa12.92□□□□□ -0.34
GTF3A-209ENST00000640289 GLRX5Q86SX6 157 aa12.92□□□□□ -0.34
GTF3A-209ENST00000640289 SLCO6A1Q86UG4 719 aa12.92□□□□□ -0.34
GTF3A-209ENST00000640289 SLC26A11Q86WA9 606 aa12.92□□□□□ -0.34
GTF3A-209ENST00000640289 ZNF761Q86XN6 746 aaPredicted RBP12.92□□□□□ -0.34
GTF3A-209ENST00000640289 PPM1NQ8N819 430 aa12.92□□□□□ -0.34
GTF3A-209ENST00000640289 GPATCH11Q8N954 259 aa12.92□□□□□ -0.34
GTF3A-209ENST00000640289 EIF1ADQ8N9N8 165 aaKnown RBP12.92□□□□□ -0.34
GTF3A-209ENST00000640289 SIDT2Q8NBJ9 832 aaKnown RBP12.92□□□□□ -0.34
GTF3A-209ENST00000640289 ACVR1CQ8NER5 493 aa12.92□□□□□ -0.34
GTF3A-209ENST00000640289 IFI44Q8TCB0 444 aa12.92□□□□□ -0.34
GTF3A-209ENST00000640289 CDKL2Q92772 493 aa12.92□□□□□ -0.34
GTF3A-209ENST00000640289 CCDC74AQ96AQ1 378 aa12.92□□□□□ -0.34
GTF3A-209ENST00000640289 TMEM159Q96B96 161 aa12.92□□□□□ -0.34
GTF3A-209ENST00000640289 TXLNGYQ9BZA5 131 aa12.92□□□□□ -0.34
GTF3A-209ENST00000640289 LRIT1Q9P2V4 623 aa12.92□□□□□ -0.34
GTF3A-209ENST00000640289 ACSL5Q9ULC5 683 aa12.92□□□□□ -0.34
GTF3A-209ENST00000640289 CDYLQ9Y232 598 aa12.92□□□□□ -0.34
GTF3A-209ENST00000640289 PTPRZ1P23471 2315 aaPredicted RBP12.91□□□□□ -0.34
GTF3A-209ENST00000640289 COL5A1P20908 1838 aaPredicted RBP12.91□□□□□ -0.34
GTF3A-209ENST00000640289 KIR2DS5A0A0G2JLQ3 304 aa12.91□□□□□ -0.34
GTF3A-209ENST00000640289 A0A0G2JNG1 304 aa12.91□□□□□ -0.34
GTF3A-209ENST00000640289 OR5K4A6NMS3 321 aa12.91□□□□□ -0.34
GTF3A-209ENST00000640289 KIR2DS3K7RE56 304 aa12.91□□□□□ -0.34
GTF3A-209ENST00000640289 GPC4O75487 556 aa12.91□□□□□ -0.34
GTF3A-209ENST00000640289 FAM155BO75949 473 aa12.91□□□□□ -0.34
GTF3A-209ENST00000640289 SLC35G4P0C7Q5 338 aa12.91□□□□□ -0.34
GTF3A-209ENST00000640289 FTH1P19P0C7X4 201 aa12.91□□□□□ -0.34
GTF3A-209ENST00000640289 XRCC1P18887 633 aaPredicted RBP12.91□□□□□ -0.34
GTF3A-209ENST00000640289 PHBP35232 272 aa12.91□□□□□ -0.34
GTF3A-209ENST00000640289 HALP42357 657 aa12.91□□□□□ -0.34
GTF3A-209ENST00000640289 DUSP3P51452 185 aaPredicted RBP12.91□□□□□ -0.34
GTF3A-209ENST00000640289 CLCN7P51798 805 aa12.91□□□□□ -0.34
GTF3A-209ENST00000640289 PMS2P54278 862 aa12.91□□□□□ -0.34
GTF3A-209ENST00000640289 CDKN2DP55273 166 aa12.91□□□□□ -0.34
GTF3A-209ENST00000640289 UBE2IP63279 158 aaKnown RBP12.91□□□□□ -0.34
GTF3A-209ENST00000640289 TIAL1Q01085 375 aaKnown RBP eCLIP12.91□□□□□ -0.34
GTF3A-209ENST00000640289 HHEXQ03014 270 aa12.91□□□□□ -0.34
GTF3A-209ENST00000640289 PUM1Q14671 1186 aaKnown RBP eCLIP12.91□□□□□ -0.347e-7■■■□□ 15.3
GTF3A-209ENST00000640289 KIR2DS5Q14953 304 aa12.91□□□□□ -0.34
GTF3A-209ENST00000640289 RPE65Q16518 533 aa12.91□□□□□ -0.34
GTF3A-209ENST00000640289 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.91□□□□□ -0.34
GTF3A-209ENST00000640289 HECTD2Q5U5R9 776 aa12.91□□□□□ -0.34
GTF3A-209ENST00000640289 CAPRIN2Q6IMN6 1127 aaKnown RBP12.91□□□□□ -0.34
GTF3A-209ENST00000640289 OTOAQ7RTW8 1153 aa12.91□□□□□ -0.34
GTF3A-209ENST00000640289 SLC9B2Q86UD5 537 aa12.91□□□□□ -0.34
GTF3A-209ENST00000640289 ZC3HC1Q86WB0 502 aaKnown RBP12.91□□□□□ -0.34
GTF3A-209ENST00000640289 GIMAP7Q8NHV1 300 aa12.91□□□□□ -0.34
GTF3A-209ENST00000640289 KCNJ9Q92806 393 aa12.91□□□□□ -0.34
GTF3A-209ENST00000640289 CXorf40BQ96DE9 158 aa12.91□□□□□ -0.34
GTF3A-209ENST00000640289 MRRFQ96E11 262 aaKnown RBP12.91□□□□□ -0.34
GTF3A-209ENST00000640289 C12orf66Q96MD2 445 aa12.91□□□□□ -0.34
GTF3A-209ENST00000640289 GPR21Q99679 349 aa12.91□□□□□ -0.34
GTF3A-209ENST00000640289 MCMBPQ9BTE3 642 aa12.91□□□□□ -0.34
GTF3A-209ENST00000640289 PARD6BQ9BYG5 372 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms