RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-229ENST00000639953 ERLEC1Q96DZ1 483 aa6.04□□□□□ -1.44
ATM-229ENST00000639953 CLIP3Q96DZ5 547 aa6.04□□□□□ -1.44
ATM-229ENST00000639953 PRICKLE1Q96MT3 831 aaPredicted RBP6.04□□□□□ -1.44
ATM-229ENST00000639953 SERPINB11Q96P15 392 aa6.04□□□□□ -1.44
ATM-229ENST00000639953 AGAP3Q96P47 875 aa6.04□□□□□ -1.44
ATM-229ENST00000639953 AGAP2Q99490 1192 aa6.04□□□□□ -1.44
ATM-229ENST00000639953 P2RY13Q9BPV8 354 aa6.04□□□□□ -1.44
ATM-229ENST00000639953 PAIP2Q9BPZ3 127 aaKnown RBP6.04□□□□□ -1.44
ATM-229ENST00000639953 MECRQ9BV79 373 aa6.04□□□□□ -1.44
ATM-229ENST00000639953 BBS2Q9BXC9 721 aa6.04□□□□□ -1.44
ATM-229ENST00000639953 SIK2Q9H0K1 926 aa6.04□□□□□ -1.44
ATM-229ENST00000639953 KCNK13Q9HB14 408 aa6.04□□□□□ -1.44
ATM-229ENST00000639953 TRIM39Q9HCM9 518 aa6.04□□□□□ -1.44
ATM-229ENST00000639953 CASS4Q9NQ75 786 aa6.04□□□□□ -1.44
ATM-229ENST00000639953 CLEC4EQ9ULY5 219 aa6.04□□□□□ -1.44
ATM-229ENST00000639953 MRPS17Q9Y2R5 130 aaKnown RBP6.04□□□□□ -1.44
ATM-229ENST00000639953 HBS1LQ9Y450 684 aaKnown RBP6.04□□□□□ -1.44
ATM-229ENST00000639953 WDR87Q6ZQQ6 2873 aa6.04□□□□□ -1.44
ATM-229ENST00000639953 CUL9Q8IWT3 2517 aa6.03□□□□□ -1.44
ATM-229ENST00000639953 USP34Q70CQ2 3546 aa6.03□□□□□ -1.44
ATM-229ENST00000639953 A0A087X1B8 175 aa6.03□□□□□ -1.44
ATM-229ENST00000639953 ZCWPW2A0A1B0GU75 182 aa6.03□□□□□ -1.44
ATM-229ENST00000639953 CFAP69A5D8W1 941 aa6.03□□□□□ -1.44
ATM-229ENST00000639953 FAM47DPA6NHR8 397 aa6.03□□□□□ -1.44
ATM-229ENST00000639953 A8MUI8 341 aa6.03□□□□□ -1.44
ATM-229ENST00000639953 J3KR12 359 aa6.03□□□□□ -1.44
ATM-229ENST00000639953 EBAG9O00559 213 aa6.03□□□□□ -1.44
ATM-229ENST00000639953 HOXC11O43248 304 aaPredicted RBP6.03□□□□□ -1.44
ATM-229ENST00000639953 ITM2AO43736 263 aa6.03□□□□□ -1.44
ATM-229ENST00000639953 CACNG3O60359 315 aa6.03□□□□□ -1.44
ATM-229ENST00000639953 ACSL4O60488 711 aa6.03□□□□□ -1.44
ATM-229ENST00000639953 TBL1XO60907 577 aa6.03□□□□□ -1.44
ATM-229ENST00000639953 TULP3O75386 442 aa6.03□□□□□ -1.44
ATM-229ENST00000639953 ALDH1A2O94788 518 aa6.03□□□□□ -1.44
ATM-229ENST00000639953 APOEP02649 317 aa6.03□□□□□ -1.44
ATM-229ENST00000639953 MMP2P08253 660 aa6.03□□□□□ -1.44
ATM-229ENST00000639953 BGNP21810 368 aa6.03□□□□□ -1.44
ATM-229ENST00000639953 NMBRP28336 390 aa6.03□□□□□ -1.44
ATM-229ENST00000639953 MSH2P43246 934 aa6.03□□□□□ -1.44
ATM-229ENST00000639953 HCAR3P49019 387 aa6.03□□□□□ -1.44
ATM-229ENST00000639953 NR2C2P49116 596 aa6.03□□□□□ -1.44
ATM-229ENST00000639953 MECP2P51608 486 aaKnown RBP6.03□□□□□ -1.44
ATM-229ENST00000639953 SNX16P57768 344 aa6.03□□□□□ -1.44
ATM-229ENST00000639953 TPI1P60174 286 aa6.03□□□□□ -1.44
ATM-229ENST00000639953 NCALDP61601 193 aa6.03□□□□□ -1.44
ATM-229ENST00000639953 ACTN3Q08043 901 aaPredicted RBP6.03□□□□□ -1.44
ATM-229ENST00000639953 GRSF1Q12849 480 aaKnown RBP eCLIP6.03□□□□□ -1.44
ATM-229ENST00000639953 OVGP1Q12889 678 aa6.03□□□□□ -1.44
ATM-229ENST00000639953 PTPRCAPQ14761 206 aa6.03□□□□□ -1.44
ATM-229ENST00000639953 PTPRRQ15256 657 aa6.03□□□□□ -1.44
ATM-229ENST00000639953 ANGPT1Q15389 498 aa6.03□□□□□ -1.44
ATM-229ENST00000639953 SMN1Q16637 294 aaKnown RBP6.03□□□□□ -1.44
ATM-229ENST00000639953 PARP6Q2NL67 630 aa6.03□□□□□ -1.44
ATM-229ENST00000639953 FAM133BQ5BKY9 247 aaKnown RBP6.03□□□□□ -1.44
ATM-229ENST00000639953 RNF187Q5TA31 235 aaPredicted RBP6.03□□□□□ -1.44
ATM-229ENST00000639953 RAP1GAP2Q684P5 730 aa6.03□□□□□ -1.44
ATM-229ENST00000639953 LRRC8BQ6P9F7 803 aa6.03□□□□□ -1.44
ATM-229ENST00000639953 TSSK4Q6SA08 328 aa6.03□□□□□ -1.44
ATM-229ENST00000639953 BEND5Q7L4P6 421 aa6.03□□□□□ -1.44
ATM-229ENST00000639953 PID1Q7Z2X4 250 aa6.03□□□□□ -1.44
ATM-229ENST00000639953 LDLRAD3Q86YD5 345 aa6.03□□□□□ -1.44
ATM-229ENST00000639953 FAM217AQ8IXS0 508 aa6.03□□□□□ -1.44
ATM-229ENST00000639953 MAML2Q8IZL2 1156 aaPredicted RBP6.03□□□□□ -1.44
ATM-229ENST00000639953 PDIK1LQ8N165 341 aa6.03□□□□□ -1.44
ATM-229ENST00000639953 CFAP52Q8N1V2 620 aa6.03□□□□□ -1.44
ATM-229ENST00000639953 FITM2Q8N6M3 262 aa6.03□□□□□ -1.44
ATM-229ENST00000639953 ANKRD53Q8N9V6 530 aa6.03□□□□□ -1.44
ATM-229ENST00000639953 CCNYQ8ND76 341 aa6.03□□□□□ -1.44
ATM-229ENST00000639953 WFDC5Q8TCV5 224 aa6.03□□□□□ -1.44
ATM-229ENST00000639953 ZNF483Q8TF39 744 aaPredicted RBP6.03□□□□□ -1.44
ATM-229ENST00000639953 DDI1Q8WTU0 396 aa6.03□□□□□ -1.44
ATM-229ENST00000639953 C10orf82Q8WW14 230 aa6.03□□□□□ -1.44
ATM-229ENST00000639953 CLDN23Q96B33 292 aa6.03□□□□□ -1.44
ATM-229ENST00000639953 MAGEB18Q96M61 343 aa6.03□□□□□ -1.44
ATM-229ENST00000639953 TTC25Q96NG3 672 aa6.03□□□□□ -1.44
ATM-229ENST00000639953 CLUHP3Q96NS8 147 aa6.03□□□□□ -1.44
ATM-229ENST00000639953 TSGA13Q96PP4 275 aa6.03□□□□□ -1.44
ATM-229ENST00000639953 OSBPL6Q9BZF3 934 aa6.03□□□□□ -1.44
ATM-229ENST00000639953 OSBPL2Q9H1P3 480 aa6.03□□□□□ -1.44
ATM-229ENST00000639953 SLC6A15Q9H2J7 730 aa6.03□□□□□ -1.44
ATM-229ENST00000639953 WDCPQ9H6R7 721 aa6.03□□□□□ -1.44
ATM-229ENST00000639953 RCOR3Q9P2K3 495 aaPredicted RBP6.03□□□□□ -1.44
ATM-229ENST00000639953 PSMC3IPQ9P2W1 217 aaPredicted RBP6.03□□□□□ -1.44
ATM-229ENST00000639953 OR12D3Q9UGF7 316 aa6.03□□□□□ -1.44
ATM-229ENST00000639953 SLC2A6Q9UGQ3 507 aa6.03□□□□□ -1.44
ATM-229ENST00000639953 ZNF510Q9Y2H8 683 aa6.03□□□□□ -1.44
ATM-229ENST00000639953 MTO1Q9Y2Z2 717 aaKnown RBP6.03□□□□□ -1.44
ATM-229ENST00000639953 VWA7Q9Y334 891 aa6.03□□□□□ -1.44
ATM-229ENST00000639953 SHROOM3Q8TF72 1996 aa6.03□□□□□ -1.44
ATM-229ENST00000639953 MYO15AQ9UKN7 3530 aa6.02□□□□□ -1.45
ATM-229ENST00000639953 HACD1B0YJ81 288 aa6.02□□□□□ -1.45
ATM-229ENST00000639953 PRRT4C9JH25 899 aa6.02□□□□□ -1.45
ATM-229ENST00000639953 GOLGA8TH3BQL2 631 aa6.02□□□□□ -1.45
ATM-229ENST00000639953 NCAM2O15394 837 aa6.02□□□□□ -1.45
ATM-229ENST00000639953 EDF1O60869 148 aaKnown RBP6.02□□□□□ -1.45
ATM-229ENST00000639953 H2AFYO75367 372 aaKnown RBP6.02□□□□□ -1.45
ATM-229ENST00000639953 SUN1O94901 812 aa6.02□□□□□ -1.45
ATM-229ENST00000639953 KAT7O95251 611 aa6.02□□□□□ -1.45
ATM-229ENST00000639953 MT-CYBP00156 380 aaPredicted RBP6.02□□□□□ -1.45
ATM-229ENST00000639953 PENKP01210 267 aaPredicted RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms