RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 PSMC1P62191 440 aaKnown RBP3.35□□□□□ -1.87
CCDC7-213ENST00000639290 TBX2Q13207 712 aaPredicted RBP3.35□□□□□ -1.87
CCDC7-213ENST00000639290 GALEQ14376 348 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 DLG2Q15700 870 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 TMTC4Q5T4D3 741 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 TTC22Q5TAA0 569 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 ANKRD40Q6AI12 368 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 SLFN12LQ6IEE8 588 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 FOXR2Q6PJQ5 311 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 PAOXQ6QHF9 649 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 UGT2A3Q6UWM9 527 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 UBE2R2Q712K3 238 aaPredicted RBP3.35□□□□□ -1.87
CCDC7-213ENST00000639290 BRAPQ7Z569 592 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 ZNF589Q86UQ0 364 aaPredicted RBP3.35□□□□□ -1.87
CCDC7-213ENST00000639290 CCDC71Q8IV32 467 aaPredicted RBP3.35□□□□□ -1.87
CCDC7-213ENST00000639290 KBTBD2Q8IY47 623 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 SYTL1Q8IYJ3 562 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 D2HGDHQ8N465 521 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 SLC20A1Q8WUM9 679 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 FKBP10Q96AY3 582 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 FAM149B1Q96BN6 582 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 FAF2Q96CS3 445 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.35□□□□□ -1.87
CCDC7-213ENST00000639290 GNPTGQ9UJJ9 305 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 FBXL4Q9UKA2 621 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 PCDHGB3Q9Y5G1 929 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 SNX9Q9Y5X1 595 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 NFS1Q9Y697 457 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 PRSS38A1L453 326 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 HMX2A2RU54 273 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 CCDC66A2RUB6 948 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 O00370 1275 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 DVL2O14641 736 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 GNB5O14775 395 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 CASKO14936 926 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 BNIP3LO60238 219 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 HIP1RO75146 1068 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 HTR3BO95264 441 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 IGHV4-31P0DP07 118 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 POLR2BP30876 1174 aaKnown RBP3.35□□□□□ -1.87
CCDC7-213ENST00000639290 ELP6Q0PNE2 266 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 ZNF460Q14592 562 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 LRRC73Q5JTD7 316 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 MAATS1Q7Z4T9 603 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 PEG10Q86TG7 708 aaKnown RBP3.35□□□□□ -1.87
CCDC7-213ENST00000639290 MYLK4Q86YV6 388 aaPredicted RBP3.35□□□□□ -1.87
CCDC7-213ENST00000639290 DIS3L2Q8IYB7 885 aaKnown RBP3.35□□□□□ -1.87
CCDC7-213ENST00000639290 IGSF22Q8N9C0 903 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 OR2A12Q8NGT7 310 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 PARD3BQ8TEW8 1205 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 CDK5RAP3Q96JB5 506 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 ZBTB45Q96K62 511 aaPredicted RBP3.35□□□□□ -1.87
CCDC7-213ENST00000639290 ART5Q96L15 291 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 PRICKLE1Q96MT3 831 aaPredicted RBP3.35□□□□□ -1.87
CCDC7-213ENST00000639290 RHNO1Q9BSD3 238 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 KRTAP4-9Q9BYQ8 210 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 NOL6Q9H6R4 1146 aaKnown RBP3.35□□□□□ -1.87
CCDC7-213ENST00000639290 WDR54Q9H977 334 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 FGF22Q9HCT0 170 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 PCMTD2Q9NV79 361 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 TMEM30AQ9NV96 361 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 NECAP2Q9NVZ3 263 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 NAGPAQ9UK23 515 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 AGAP1Q9UPQ3 857 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 KIF3AQ9Y496 699 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 CCDC169A6NNP5 214 aa3.34□□□□□ -1.87
CCDC7-213ENST00000639290 PRSS47A8MTI9 375 aa3.34□□□□□ -1.87
CCDC7-213ENST00000639290 CCDC188H7C350 402 aa3.34□□□□□ -1.87
CCDC7-213ENST00000639290 EIF3DO15371 548 aaKnown RBP eCLIP3.34□□□□□ -1.87
CCDC7-213ENST00000639290 WDR1O75083 606 aa3.34□□□□□ -1.87
CCDC7-213ENST00000639290 PROCP04070 461 aa3.34□□□□□ -1.87
CCDC7-213ENST00000639290 ITGAXP20702 1163 aa3.34□□□□□ -1.87
CCDC7-213ENST00000639290 TRIM23P36406 574 aa3.34□□□□□ -1.87
CCDC7-213ENST00000639290 MATR3P43243 847 aaKnown RBP eCLIP3.34□□□□□ -1.87
CCDC7-213ENST00000639290 SGSHP51688 502 aa3.34□□□□□ -1.87
CCDC7-213ENST00000639290 RPS4XP62701 263 aaKnown RBP3.34□□□□□ -1.87
CCDC7-213ENST00000639290 HHEXQ03014 270 aa3.34□□□□□ -1.87
CCDC7-213ENST00000639290 PMPCAQ10713 525 aa3.34□□□□□ -1.87
CCDC7-213ENST00000639290 HYAL2Q12891 473 aa3.34□□□□□ -1.87
CCDC7-213ENST00000639290 SF3B4Q15427 424 aaKnown RBP eCLIP3.34□□□□□ -1.87
CCDC7-213ENST00000639290 GOLGA7BQ2TAP0 167 aa3.34□□□□□ -1.87
CCDC7-213ENST00000639290 ZNF766Q5HY98 468 aa3.34□□□□□ -1.87
CCDC7-213ENST00000639290 SAMD5Q5TGI4 173 aa3.34□□□□□ -1.87
CCDC7-213ENST00000639290 NLRC3Q7RTR2 1065 aa3.34□□□□□ -1.87
CCDC7-213ENST00000639290 MB21D2Q8IYB1 491 aaPredicted RBP3.34□□□□□ -1.87
CCDC7-213ENST00000639290 PCDH20Q8N6Y1 951 aaKnown RBP3.34□□□□□ -1.87
CCDC7-213ENST00000639290 CCDC110Q8TBZ0 833 aa3.34□□□□□ -1.87
CCDC7-213ENST00000639290 CREB3L4Q8TEY5 395 aa3.34□□□□□ -1.87
CCDC7-213ENST00000639290 ZFPM2Q8WW38 1151 aa3.34□□□□□ -1.87
CCDC7-213ENST00000639290 DNAI2Q9GZS0 605 aa3.34□□□□□ -1.87
CCDC7-213ENST00000639290 AKIRIN1Q9H9L7 192 aaPredicted RBP3.34□□□□□ -1.87
CCDC7-213ENST00000639290 NMUR1Q9HB89 426 aa3.34□□□□□ -1.87
CCDC7-213ENST00000639290 MBNL1Q9NR56 388 aaKnown RBP3.34□□□□□ -1.87
CCDC7-213ENST00000639290 NXT1Q9UKK6 140 aaKnown RBP3.34□□□□□ -1.87
CCDC7-213ENST00000639290 TESMINQ9Y4I5 508 aa3.34□□□□□ -1.87
CCDC7-213ENST00000639290 STYXL1Q9Y6J8 313 aa3.34□□□□□ -1.87
CCDC7-213ENST00000639290 NOTCH3Q9UM47 2321 aa3.34□□□□□ -1.87
CCDC7-213ENST00000639290 ABCA1O95477 2261 aa3.34□□□□□ -1.87
CCDC7-213ENST00000639290 A0A1W2PPR1 153 aa3.34□□□□□ -1.88
CCDC7-213ENST00000639290 ANKRD34BA5PLL1 514 aa3.34□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms