RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 SUN2Q9UH99 717 aa21.15■□□□□ 0.98
CLN6-224ENST00000638076 ANGPTL3Q9Y5C1 460 aa21.15■□□□□ 0.98
CLN6-224ENST00000638076 HELZP42694 1942 aaKnown RBP21.14■□□□□ 0.98
CLN6-224ENST00000638076 EEDO75530 441 aaKnown RBP21.14■□□□□ 0.97
CLN6-224ENST00000638076 HSD17B1P14061 328 aa21.14■□□□□ 0.97
CLN6-224ENST00000638076 TYRP14679 529 aa21.14■□□□□ 0.97
CLN6-224ENST00000638076 HMOX2P30519 316 aa21.14■□□□□ 0.97
CLN6-224ENST00000638076 B4GALNT1Q00973 533 aa21.14■□□□□ 0.97
CLN6-224ENST00000638076 NR6A1Q15406 480 aa21.14■□□□□ 0.97
CLN6-224ENST00000638076 APLFQ8IW19 511 aaPredicted RBP21.14■□□□□ 0.97
CLN6-224ENST00000638076 GALNT4Q8N4A0 578 aa21.14■□□□□ 0.97
CLN6-224ENST00000638076 MRPL43Q8N983 215 aaKnown RBP21.14■□□□□ 0.97
CLN6-224ENST00000638076 PHC3Q8NDX5 983 aa21.14■□□□□ 0.97
CLN6-224ENST00000638076 DNAJB14Q8TBM8 379 aa21.14■□□□□ 0.97
CLN6-224ENST00000638076 PROKR1Q8TCW9 393 aa21.14■□□□□ 0.97
CLN6-224ENST00000638076 TRIM54Q9BYV2 358 aa21.14■□□□□ 0.97
CLN6-224ENST00000638076 CD244Q9BZW8 370 aa21.14■□□□□ 0.97
CLN6-224ENST00000638076 OPTCQ9UBM4 332 aa21.14■□□□□ 0.97
CLN6-224ENST00000638076 B4GALT6Q9UBX8 382 aa21.14■□□□□ 0.97
CLN6-224ENST00000638076 EGFL7Q9UHF1 273 aa21.14■□□□□ 0.97
CLN6-224ENST00000638076 PCDHA9Q9Y5H5 950 aa21.14■□□□□ 0.97
CLN6-224ENST00000638076 ZNF839A8K0R7 811 aa21.13■□□□□ 0.97
CLN6-224ENST00000638076 LSM1O15116 133 aaKnown RBP21.13■□□□□ 0.97
CLN6-224ENST00000638076 DENRO43583 198 aaKnown RBP21.13■□□□□ 0.97
CLN6-224ENST00000638076 C1SP09871 688 aa21.13■□□□□ 0.97
CLN6-224ENST00000638076 PTPN2P17706 415 aa21.13■□□□□ 0.97
CLN6-224ENST00000638076 DDX6P26196 483 aaKnown RBP eCLIP21.13■□□□□ 0.972e-8■■□□□ 11.6
CLN6-224ENST00000638076 EPHA5P54756 1037 aa21.13■□□□□ 0.97
CLN6-224ENST00000638076 SLC5A9Q2M3M2 681 aa21.13■□□□□ 0.97
CLN6-224ENST00000638076 TIGD2Q4W5G0 525 aa21.13■□□□□ 0.97
CLN6-224ENST00000638076 HABP4Q5JVS0 413 aaKnown RBP21.13■□□□□ 0.97
CLN6-224ENST00000638076 RNF220Q5VTB9 566 aa21.13■□□□□ 0.97
CLN6-224ENST00000638076 SPHK2Q9NRA0 654 aa21.13■□□□□ 0.97
CLN6-224ENST00000638076 KCTD5Q9NXV2 234 aa21.13■□□□□ 0.97
CLN6-224ENST00000638076 CXXC1Q9P0U4 656 aaPredicted RBP21.13■□□□□ 0.97
CLN6-224ENST00000638076 RAB26Q9ULW5 256 aa21.13■□□□□ 0.97
CLN6-224ENST00000638076 FAM234BA2RU67 622 aa21.13■□□□□ 0.97
CLN6-224ENST00000638076 RHOP08100 348 aa21.13■□□□□ 0.97
CLN6-224ENST00000638076 CASP2P42575 452 aa21.13■□□□□ 0.97
CLN6-224ENST00000638076 MBOAT1Q6ZNC8 495 aa21.13■□□□□ 0.97
CLN6-224ENST00000638076 ZUFSPQ96AP4 578 aa21.13■□□□□ 0.97
CLN6-224ENST00000638076 EME1Q96AY2 570 aa21.13■□□□□ 0.97
CLN6-224ENST00000638076 HEBP1Q9NRV9 189 aa21.13■□□□□ 0.97
CLN6-224ENST00000638076 CD84Q9UIB8 345 aa21.13■□□□□ 0.97
CLN6-224ENST00000638076 LEF1Q9UJU2 399 aaPredicted RBP21.13■□□□□ 0.97
CLN6-224ENST00000638076 SNX13Q9Y5W8 968 aa21.13■□□□□ 0.97
CLN6-224ENST00000638076 CREB5Q02930 508 aa21.12■□□□□ 0.97
CLN6-224ENST00000638076 EMX2Q04743 252 aa21.12■□□□□ 0.97
CLN6-224ENST00000638076 CRY1Q16526 586 aa21.12■□□□□ 0.97
CLN6-224ENST00000638076 AP5B1Q2VPB7 878 aa21.12■□□□□ 0.97
CLN6-224ENST00000638076 ARHGAP15Q53QZ3 475 aa21.12■□□□□ 0.97
CLN6-224ENST00000638076 ADIPOR2Q86V24 386 aa21.12■□□□□ 0.97
CLN6-224ENST00000638076 CANT1Q8WVQ1 401 aa21.12■□□□□ 0.97
CLN6-224ENST00000638076 TMEM125Q96AQ2 219 aa21.12■□□□□ 0.97
CLN6-224ENST00000638076 EFHD1Q9BUP0 239 aa21.12■□□□□ 0.97
CLN6-224ENST00000638076 Q9H521 79 aa21.12■□□□□ 0.97
CLN6-224ENST00000638076 RDH14Q9HBH5 336 aa21.12■□□□□ 0.97
CLN6-224ENST00000638076 AP4B1Q9Y6B7 739 aa21.12■□□□□ 0.97
CLN6-224ENST00000638076 PIKFYVEQ9Y2I7 2098 aa21.12■□□□□ 0.97
CLN6-224ENST00000638076 FGBP02675 491 aa21.12■□□□□ 0.97
CLN6-224ENST00000638076 G6PDP11413 515 aa21.12■□□□□ 0.97
CLN6-224ENST00000638076 CCR7P32248 378 aa21.12■□□□□ 0.97
CLN6-224ENST00000638076 SPINT3P49223 89 aa21.12■□□□□ 0.97
CLN6-224ENST00000638076 BNIP2Q12982 314 aa21.12■□□□□ 0.97
CLN6-224ENST00000638076 ARHGEF7Q14155 803 aa21.12■□□□□ 0.97
CLN6-224ENST00000638076 RABL3Q5HYI8 236 aa21.12■□□□□ 0.97
CLN6-224ENST00000638076 GDPD4Q6W3E5 623 aa21.12■□□□□ 0.97
CLN6-224ENST00000638076 SPPL2CQ8IUH8 684 aa21.12■□□□□ 0.97
CLN6-224ENST00000638076 OR2A12Q8NGT7 310 aa21.12■□□□□ 0.97
CLN6-224ENST00000638076 SLAMF8Q9P0V8 285 aa21.12■□□□□ 0.97
CLN6-224ENST00000638076 CNOT6Q9ULM6 557 aaKnown RBP21.12■□□□□ 0.97
CLN6-224ENST00000638076 FGF19O95750 216 aa21.11■□□□□ 0.97
CLN6-224ENST00000638076 CBSLP0DN79 551 aa21.11■□□□□ 0.97
CLN6-224ENST00000638076 PIM1P11309 404 aaPredicted RBP21.11■□□□□ 0.97
CLN6-224ENST00000638076 CBSP35520 551 aa21.11■□□□□ 0.97
CLN6-224ENST00000638076 PIK3CGP48736 1102 aa21.11■□□□□ 0.97
CLN6-224ENST00000638076 PRKG2Q13237 762 aa21.11■□□□□ 0.97
CLN6-224ENST00000638076 RFTN2Q52LD8 501 aaPredicted RBP21.11■□□□□ 0.97
CLN6-224ENST00000638076 LY6G5CQ5SRR4 150 aa21.11■□□□□ 0.97
CLN6-224ENST00000638076 UGT2A3Q6UWM9 527 aa21.11■□□□□ 0.97
CLN6-224ENST00000638076 ZFAND4Q86XD8 727 aa21.11■□□□□ 0.97
CLN6-224ENST00000638076 MARVELD2Q8N4S9 558 aa21.11■□□□□ 0.97
CLN6-224ENST00000638076 ZNF784Q8NCA9 323 aaPredicted RBP21.11■□□□□ 0.97
CLN6-224ENST00000638076 UBTD2Q8WUN7 234 aa21.11■□□□□ 0.97
CLN6-224ENST00000638076 AK5Q9Y6K8 562 aa21.11■□□□□ 0.97
CLN6-224ENST00000638076 K7EPI3 171 aa21.11■□□□□ 0.97
CLN6-224ENST00000638076 FFAR3O14843 346 aa21.11■□□□□ 0.97
CLN6-224ENST00000638076 GPR42O15529 346 aa21.11■□□□□ 0.97
CLN6-224ENST00000638076 ZNF26P17031 533 aaPredicted RBP21.11■□□□□ 0.97
CLN6-224ENST00000638076 CTNNB1P35222 781 aa21.11■□□□□ 0.97
CLN6-224ENST00000638076 TMEM215Q68D42 235 aa21.11■□□□□ 0.97
CLN6-224ENST00000638076 ELMSAN1Q6PJG2 1045 aa21.11■□□□□ 0.97
CLN6-224ENST00000638076 CHCHD4Q8N4Q1 142 aa21.11■□□□□ 0.97
CLN6-224ENST00000638076 NAT16Q8N8M0 369 aa21.11■□□□□ 0.97
CLN6-224ENST00000638076 POF1BQ8WVV4 589 aa21.11■□□□□ 0.97
CLN6-224ENST00000638076 ULK4Q96C45 1275 aa21.11■□□□□ 0.97
CLN6-224ENST00000638076 TMEM45AQ9NWC5 275 aa21.11■□□□□ 0.97
CLN6-224ENST00000638076 CNOT11Q9UKZ1 510 aaKnown RBP21.11■□□□□ 0.97
CLN6-224ENST00000638076 TMPRSS11EQ9UL52 423 aa21.11■□□□□ 0.97
CLN6-224ENST00000638076 POLR3HQ9Y535 204 aaPredicted RBP21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms