RNA–Protein interactions for RNA: ENST00000636934.1

CLN8-211, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-211ENST00000636934 GJA8P48165 433 aa18.21■□□□□ 0.51
CLN8-211ENST00000636934 HSPA7P48741 367 aa18.21■□□□□ 0.51
CLN8-211ENST00000636934 EEFSECP57772 596 aaKnown RBP18.21■□□□□ 0.51
CLN8-211ENST00000636934 UFM1P61960 85 aa18.21■□□□□ 0.51
CLN8-211ENST00000636934 TRAF3Q13114 568 aa18.21■□□□□ 0.51
CLN8-211ENST00000636934 NR6A1Q15406 480 aa18.21■□□□□ 0.51
CLN8-211ENST00000636934 LCN8Q6JVE9 175 aa18.21■□□□□ 0.51
CLN8-211ENST00000636934 ELMSAN1Q6PJG2 1045 aa18.21■□□□□ 0.51
CLN8-211ENST00000636934 CYP2R1Q6VVX0 501 aa18.21■□□□□ 0.51
CLN8-211ENST00000636934 Q6ZSR9 355 aa18.21■□□□□ 0.51
CLN8-211ENST00000636934 TCAIMQ8N3R3 496 aa18.21■□□□□ 0.51
CLN8-211ENST00000636934 SLC22A17Q8WUG5 538 aa18.21■□□□□ 0.51
CLN8-211ENST00000636934 CDK15Q96Q40 435 aa18.21■□□□□ 0.51
CLN8-211ENST00000636934 BBS2Q9BXC9 721 aa18.21■□□□□ 0.51
CLN8-211ENST00000636934 SMG9Q9H0W8 520 aaKnown RBP18.21■□□□□ 0.51
CLN8-211ENST00000636934 PKD2L2Q9NZM6 624 aa18.21■□□□□ 0.51
CLN8-211ENST00000636934 TRPS1Q9UHF7 1281 aa18.21■□□□□ 0.51
CLN8-211ENST00000636934 ZMYM5Q9UJ78 669 aa18.21■□□□□ 0.51
CLN8-211ENST00000636934 PCDHA9Q9Y5H5 950 aa18.21■□□□□ 0.51
CLN8-211ENST00000636934 A8MX80 341 aa18.2■□□□□ 0.5
CLN8-211ENST00000636934 TAPBPO15533 448 aa18.2■□□□□ 0.5
CLN8-211ENST00000636934 BNIP3LO60238 219 aa18.2■□□□□ 0.5
CLN8-211ENST00000636934 GUCA1CO95843 209 aa18.2■□□□□ 0.5
CLN8-211ENST00000636934 ENO2P09104 434 aaPredicted RBP18.2■□□□□ 0.5
CLN8-211ENST00000636934 CYP2A6P11509 494 aaPredicted RBP18.2■□□□□ 0.5
CLN8-211ENST00000636934 IL10P22301 178 aa18.2■□□□□ 0.5
CLN8-211ENST00000636934 CA5AP35218 305 aa18.2■□□□□ 0.5
CLN8-211ENST00000636934 AASDHQ4L235 1098 aaPredicted RBP18.2■□□□□ 0.5
CLN8-211ENST00000636934 ZFAND4Q86XD8 727 aa18.2■□□□□ 0.5
CLN8-211ENST00000636934 TMEM25Q86YD3 366 aa18.2■□□□□ 0.5
CLN8-211ENST00000636934 SFRP1Q8N474 314 aa18.2■□□□□ 0.5
CLN8-211ENST00000636934 IRF7Q92985 503 aa18.2■□□□□ 0.5
CLN8-211ENST00000636934 RHBDF1Q96CC6 855 aa18.2■□□□□ 0.5
CLN8-211ENST00000636934 C1orf50Q9BV19 199 aa18.2■□□□□ 0.5
CLN8-211ENST00000636934 RAD18Q9NS91 495 aa18.2■□□□□ 0.5
CLN8-211ENST00000636934 CMTM6Q9NX76 183 aa18.2■□□□□ 0.5
CLN8-211ENST00000636934 ELOVL2Q9NXB9 296 aa18.2■□□□□ 0.5
CLN8-211ENST00000636934 IGLV3-16A0A075B6K0 115 aa18.19■□□□□ 0.5
CLN8-211ENST00000636934 KANSL1LA0AUZ9 987 aa18.19■□□□□ 0.5
CLN8-211ENST00000636934 PABPN1LA6NDY0 278 aaKnown RBP18.19■□□□□ 0.5
CLN8-211ENST00000636934 WASH3PC4AMC7 463 aa18.19■□□□□ 0.5
CLN8-211ENST00000636934 NEDD8-MDP1E9PL57 170 aa18.19■□□□□ 0.5
CLN8-211ENST00000636934 HNRNPRO43390 633 aaKnown RBP18.19■□□□□ 0.5
CLN8-211ENST00000636934 DNAJA2O60884 412 aa18.19■□□□□ 0.5
CLN8-211ENST00000636934 KATNA1O75449 491 aa18.19■□□□□ 0.5
CLN8-211ENST00000636934 ARHGEF15O94989 841 aa18.19■□□□□ 0.5
CLN8-211ENST00000636934 UGT2B4P06133 528 aa18.19■□□□□ 0.5
CLN8-211ENST00000636934 ANXA5P08758 320 aa18.19■□□□□ 0.5
CLN8-211ENST00000636934 LINC00271P0C7V0 271 aa18.19■□□□□ 0.5
CLN8-211ENST00000636934 EBLN1P0CF75 366 aa18.19■□□□□ 0.5
CLN8-211ENST00000636934 ZNF30P17039 623 aa18.19■□□□□ 0.5
CLN8-211ENST00000636934 GRIA3P42263 894 aa18.19■□□□□ 0.5
CLN8-211ENST00000636934 BRAT1Q6PJG6 821 aa18.19■□□□□ 0.5
CLN8-211ENST00000636934 GDPD4Q6W3E5 623 aa18.19■□□□□ 0.5
CLN8-211ENST00000636934 DPY19L3Q6ZPD9 716 aa18.19■□□□□ 0.5
CLN8-211ENST00000636934 DPP10Q8N608 796 aa18.19■□□□□ 0.5
CLN8-211ENST00000636934 TMEM125Q96AQ2 219 aa18.19■□□□□ 0.5
CLN8-211ENST00000636934 CCDC97Q96F63 343 aaPredicted RBP18.19■□□□□ 0.5
CLN8-211ENST00000636934 ZBTB18Q99592 522 aa18.19■□□□□ 0.5
CLN8-211ENST00000636934 CENPKQ9BS16 269 aa18.19■□□□□ 0.5
CLN8-211ENST00000636934 NTMT1Q9BV86 223 aa18.19■□□□□ 0.5
CLN8-211ENST00000636934 SLC29A3Q9BZD2 475 aa18.19■□□□□ 0.5
CLN8-211ENST00000636934 BRD9Q9H8M2 597 aa18.19■□□□□ 0.5
CLN8-211ENST00000636934 CCM2LQ9NUG4 571 aaPredicted RBP18.19■□□□□ 0.5
CLN8-211ENST00000636934 TDP1Q9NUW8 608 aa18.19■□□□□ 0.5
CLN8-211ENST00000636934 CNOT6Q9ULM6 557 aaKnown RBP18.19■□□□□ 0.5
CLN8-211ENST00000636934 EIF3LQ9Y262 564 aaKnown RBP18.19■□□□□ 0.5
CLN8-211ENST00000636934 AP4B1Q9Y6B7 739 aa18.19■□□□□ 0.5
CLN8-211ENST00000636934 LSM1O15116 133 aaKnown RBP18.19■□□□□ 0.5
CLN8-211ENST00000636934 KPNA5O15131 536 aa18.19■□□□□ 0.5
CLN8-211ENST00000636934 C8GP07360 202 aa18.19■□□□□ 0.5
CLN8-211ENST00000636934 EPB42P16452 691 aa18.19■□□□□ 0.5
CLN8-211ENST00000636934 PSMA4P25789 261 aaKnown RBP18.19■□□□□ 0.5
CLN8-211ENST00000636934 CCR2P41597 374 aa18.19■□□□□ 0.5
CLN8-211ENST00000636934 ZFP36L2P47974 494 aaKnown RBP18.19■□□□□ 0.5
CLN8-211ENST00000636934 SPINT3P49223 89 aa18.19■□□□□ 0.5
CLN8-211ENST00000636934 CDKL1Q00532 357 aa18.19■□□□□ 0.5
CLN8-211ENST00000636934 PTSQ03393 145 aa18.19■□□□□ 0.5
CLN8-211ENST00000636934 ARHGEF7Q14155 803 aa18.19■□□□□ 0.5
CLN8-211ENST00000636934 CAPRIN1Q14444 709 aaKnown RBP18.19■□□□□ 0.5
CLN8-211ENST00000636934 TLR1Q15399 786 aa18.19■□□□□ 0.5
CLN8-211ENST00000636934 TEAD2Q15562 447 aa18.19■□□□□ 0.5
CLN8-211ENST00000636934 C18orf21Q32NC0 220 aaPredicted RBP18.19■□□□□ 0.5
CLN8-211ENST00000636934 UGT2A3Q6UWM9 527 aa18.19■□□□□ 0.5
CLN8-211ENST00000636934 MRPL43Q8N983 215 aaKnown RBP18.19■□□□□ 0.5
CLN8-211ENST00000636934 LRTOMTQ8WZ04 291 aa18.19■□□□□ 0.5
CLN8-211ENST00000636934 SLCO4A1Q96BD0 722 aa18.19■□□□□ 0.5
CLN8-211ENST00000636934 OTUB2Q96DC9 234 aa18.19■□□□□ 0.5
CLN8-211ENST00000636934 LRCH3Q96II8 777 aa18.19■□□□□ 0.5
CLN8-211ENST00000636934 SLC2A11Q9BYW1 496 aa18.19■□□□□ 0.5
CLN8-211ENST00000636934 CCL26Q9Y258 94 aa18.19■□□□□ 0.5
CLN8-211ENST00000636934 SNX13Q9Y5W8 968 aa18.19■□□□□ 0.5
CLN8-211ENST00000636934 ZNF839A8K0R7 811 aa18.18■□□□□ 0.5
CLN8-211ENST00000636934 C9JVG2 144 aa18.18■□□□□ 0.5
CLN8-211ENST00000636934 ARNTLO00327 626 aa18.18■□□□□ 0.5
CLN8-211ENST00000636934 FGBP02675 491 aa18.18■□□□□ 0.5
CLN8-211ENST00000636934 GPIP06744 558 aa18.18■□□□□ 0.5
CLN8-211ENST00000636934 MPC1LP0DKB6 136 aa18.18■□□□□ 0.5
CLN8-211ENST00000636934 ATP6V1B2P21281 511 aa18.18■□□□□ 0.5
CLN8-211ENST00000636934 HTR6P50406 440 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms