RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 CTAGE3PQ8IX95 158 aa6.61□□□□□ -1.35
UPF3B-205ENST00000636792 PHACTR4Q8IZ21 702 aa6.61□□□□□ -1.35
UPF3B-205ENST00000636792 SLC22A18ASQ8N1D0 253 aa6.61□□□□□ -1.35
UPF3B-205ENST00000636792 OR2L2Q8NH16 312 aa6.61□□□□□ -1.35
UPF3B-205ENST00000636792 UBLCP1Q8WVY7 318 aaPredicted RBP6.61□□□□□ -1.35
UPF3B-205ENST00000636792 PIGKQ92643 395 aa6.61□□□□□ -1.35
UPF3B-205ENST00000636792 ATOH1Q92858 354 aaPredicted RBP6.61□□□□□ -1.35
UPF3B-205ENST00000636792 KLK6Q92876 244 aa6.61□□□□□ -1.35
UPF3B-205ENST00000636792 GLMNQ92990 594 aa6.61□□□□□ -1.35
UPF3B-205ENST00000636792 CABS1Q96KC9 395 aa6.61□□□□□ -1.35
UPF3B-205ENST00000636792 BIRC8Q96P09 236 aa6.61□□□□□ -1.35
UPF3B-205ENST00000636792 PAFAH2Q99487 392 aa6.61□□□□□ -1.35
UPF3B-205ENST00000636792 AGAP2Q99490 1192 aa6.61□□□□□ -1.35
UPF3B-205ENST00000636792 ELF4Q99607 663 aaPredicted RBP6.61□□□□□ -1.35
UPF3B-205ENST00000636792 CCM2Q9BSQ5 444 aa6.61□□□□□ -1.35
UPF3B-205ENST00000636792 AARSD1Q9BTE6 412 aaKnown RBP6.61□□□□□ -1.35
UPF3B-205ENST00000636792 GSDMCQ9BYG8 508 aa6.61□□□□□ -1.35
UPF3B-205ENST00000636792 KRTAP9-9Q9BYP9 154 aa6.61□□□□□ -1.35
UPF3B-205ENST00000636792 KRTAP9-4Q9BYQ2 154 aa6.61□□□□□ -1.35
UPF3B-205ENST00000636792 SLC13A1Q9BZW2 595 aa6.61□□□□□ -1.35
UPF3B-205ENST00000636792 STMN4Q9H169 189 aaPredicted RBP6.61□□□□□ -1.35
UPF3B-205ENST00000636792 EPB41L4BQ9H329 900 aa6.61□□□□□ -1.35
UPF3B-205ENST00000636792 ACBD3Q9H3P7 528 aa6.61□□□□□ -1.35
UPF3B-205ENST00000636792 DPEP2Q9H4A9 486 aa6.61□□□□□ -1.35
UPF3B-205ENST00000636792 SUDS3Q9H7L9 328 aaPredicted RBP6.61□□□□□ -1.35
UPF3B-205ENST00000636792 FZD3Q9NPG1 666 aa6.61□□□□□ -1.35
UPF3B-205ENST00000636792 WASH6PQ9NQA3 447 aa6.61□□□□□ -1.35
UPF3B-205ENST00000636792 IARS2Q9NSE4 1012 aaKnown RBP6.61□□□□□ -1.35
UPF3B-205ENST00000636792 SPATS2LQ9NUQ6 558 aaKnown RBP6.61□□□□□ -1.35
UPF3B-205ENST00000636792 SENP1Q9P0U3 644 aa6.61□□□□□ -1.35
UPF3B-205ENST00000636792 MARCH4Q9P2E8 410 aaPredicted RBP6.61□□□□□ -1.35
UPF3B-205ENST00000636792 PSMC3IPQ9P2W1 217 aaPredicted RBP6.61□□□□□ -1.35
UPF3B-205ENST00000636792 ATXN10Q9UBB4 475 aa6.61□□□□□ -1.35
UPF3B-205ENST00000636792 SPASTQ9UBP0 616 aa6.61□□□□□ -1.35
UPF3B-205ENST00000636792 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.61□□□□□ -1.35
UPF3B-205ENST00000636792 APOBEC3BQ9UH17 382 aaKnown RBP6.61□□□□□ -1.35
UPF3B-205ENST00000636792 PCOLCE2Q9UKZ9 415 aa6.61□□□□□ -1.35
UPF3B-205ENST00000636792 TMPRSS11EQ9UL52 423 aa6.61□□□□□ -1.35
UPF3B-205ENST00000636792 ANKRD6Q9Y2G4 727 aa6.61□□□□□ -1.35
UPF3B-205ENST00000636792 OR1A2Q9Y585 309 aa6.61□□□□□ -1.35
UPF3B-205ENST00000636792 PCDHGB2Q9Y5G2 931 aa6.61□□□□□ -1.35
UPF3B-205ENST00000636792 V9GYY5 206 aaPredicted RBP6.61□□□□□ -1.35
UPF3B-205ENST00000636792 KIR2DS5A0A0G2JLQ3 304 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 A0A0G2JNG1 304 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 A0A0U1RQS6 177 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 IQANK1A0A1B0GTG1 560 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 A0A1B0GTQ1 180 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 UBA6A0AVT1 1052 aaPredicted RBP6.6□□□□□ -1.35
UPF3B-205ENST00000636792 CCDC78A2IDD5 438 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 TMEM202A6NGA9 273 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 OR51F1A6NGY5 319 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 PRR19A6NJB7 356 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 E5RI56 91 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 H0Y8X5 98 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 KIR2DS3K7RE56 304 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 CCL22O00626 93 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 ATP8B1O43520 1251 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 HYAL3O43820 417 aaPredicted RBP6.6□□□□□ -1.35
UPF3B-205ENST00000636792 PCDHGA12O60330 932 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 KDM1AO60341 852 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 UGT1A9O60656 530 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 AHSGP02765 367 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 WNT1P04628 370 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 RPN2P04844 631 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 APOA4P06727 396 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 ERVK-10P10266 1014 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 ALPPL2P10696 532 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 ZNF8P17098 575 aaPredicted RBP6.6□□□□□ -1.35
UPF3B-205ENST00000636792 UGT1A6P19224 532 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 UGT1A1P22309 533 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 UGT1A4P22310 534 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 NDUFS1P28331 727 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 UGT1A3P35503 534 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 UGT1A5P35504 534 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 RGS4P49798 205 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 SERPINB8P50452 374 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 KPNA2P52292 529 aaKnown RBP6.6□□□□□ -1.35
UPF3B-205ENST00000636792 SLC12A2P55011 1212 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 CLDN2P57739 230 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 SRP54P61011 504 aaKnown RBP6.6□□□□□ -1.35
UPF3B-205ENST00000636792 B4GALNT1Q00973 533 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 IFFO1Q0D2I5 559 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 SRSF5Q13243 272 aaKnown RBP6.6□□□□□ -1.35
UPF3B-205ENST00000636792 FZD2Q14332 565 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 GBX1Q14549 363 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 SEMA3AQ14563 771 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 PTPRCAPQ14761 206 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 KIR2DS5Q14953 304 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 ZKSCAN8Q15776 578 aaPredicted RBP6.6□□□□□ -1.35
UPF3B-205ENST00000636792 UAP1Q16222 522 aaPredicted RBP6.6□□□□□ -1.35
UPF3B-205ENST00000636792 CSRP2Q16527 193 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 INSCQ1MX18 579 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 ALG11Q2TAA5 492 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 TRIM61Q5EBN2 209 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 AGAP9Q5VTM2 703 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 ENPP7Q6UWV6 458 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 RFLNAQ6ZTI6 216 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 ARMCX6Q7L4S7 300 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 STRA8Q7Z7C7 330 aa6.6□□□□□ -1.35
UPF3B-205ENST00000636792 C11orf96Q7Z7L8 435 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms