RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 CAPN15O75808 1086 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 RAB36O95755 333 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 IGFBP1P08833 259 aaPredicted RBP5.95□□□□□ -1.46
SCN1A-212ENST00000636194 TGFB3P10600 412 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 IL1R1P14778 569 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 UCHL3P15374 230 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 CDC25AP30304 524 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 CDC25CP30307 473 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 PNLIPRP1P54315 467 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 GPX6P59796 221 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 E2F1Q01094 437 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 TLE1Q04724 770 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 MCL1Q07820 350 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 EXOC3L2Q2M3D2 409 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 LINGO2Q7L985 606 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 PLEKHH3Q7Z736 793 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 FAM83AQ86UY5 434 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 CACUL1Q86Y37 369 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 SLC34A3Q8N130 599 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 LNX2Q8N448 690 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 SLC7A6OSQ96CW6 309 aaPredicted RBP5.95□□□□□ -1.46
SCN1A-212ENST00000636194 CCDC120Q96HB5 630 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 MAPKAP1Q9BPZ7 522 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 VCPKMTQ9H867 229 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 GRHL1Q9NZI5 618 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 ZMAT5Q9UDW3 170 aaKnown RBP5.95□□□□□ -1.46
SCN1A-212ENST00000636194 SCP2D1Q9UJQ7 156 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 SLC7A11Q9UPY5 501 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 SQORQ9Y6N5 450 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 GPR89AB7ZAQ6 455 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 CDC7O00311 574 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 ERAL1O75616 437 aaKnown RBP5.95□□□□□ -1.46
SCN1A-212ENST00000636194 GPR89BP0CG08 455 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 CYP2F1P24903 491 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 ADORA1P30542 326 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 KIR3DL1P43629 444 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 ERVK-21P61565 698 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 NCS1P62166 190 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 DYNLL1P63167 89 aaKnown RBP5.95□□□□□ -1.46
SCN1A-212ENST00000636194 ERN2Q76MJ5 926 aaKnown RBP5.95□□□□□ -1.46
SCN1A-212ENST00000636194 DYNLL2Q96FJ2 89 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 UROC1Q96N76 676 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 MRPL57Q9BQC6 102 aaKnown RBP5.95□□□□□ -1.46
SCN1A-212ENST00000636194 C12orf65Q9H3J6 166 aaKnown RBP5.95□□□□□ -1.46
SCN1A-212ENST00000636194 PNPLA3Q9NST1 481 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 MARCH2Q9P0N8 246 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 CLCA3PQ9Y6N3 262 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 ATP7BP35670 1465 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 SDK2Q58EX2 2172 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 NPIPA5E9PKD4 350 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 CRYZL1O95825 349 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 PLEKP08567 350 aaPredicted RBP5.95□□□□□ -1.46
SCN1A-212ENST00000636194 ADIGQ0VDE8 80 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 FSTL1Q12841 308 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 GRK1Q15835 563 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 RASGRP2Q7LDG7 609 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 COX18Q8N8Q8 333 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 OR5J2Q8NH18 312 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 UFD1Q92890 307 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 MOAP1Q96BY2 351 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 EQTNQ9NQ60 294 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 COMMD3Q9UBI1 195 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 NPIPA1Q9UND3 350 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 PCDHGA8Q9Y5G5 932 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 SNCAIPQ9Y6H5 919 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 COMMD3-BMI1R4GMX3 469 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 ABCA8O94911 1581 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 A0A1B0GVM2 712 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 TCAF2A6NFQ2 919 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 MATN2O00339 956 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 KHNYNO15037 678 aaKnown RBP5.95□□□□□ -1.46
SCN1A-212ENST00000636194 NARSO43776 548 aaKnown RBP5.95□□□□□ -1.46
SCN1A-212ENST00000636194 B3GALT2O43825 422 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 ZMPSTE24O75844 475 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 JCHAINP01591 159 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 RHCEP18577 417 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 CDK2P24941 298 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 ACSL1P33121 698 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 FOXM1Q08050 763 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 PCDH1Q08174 1060 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 SLC41A1Q8IVJ1 513 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 FOXRED2Q8IWF2 684 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 ZNF619Q8N2I2 560 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 FBXO36Q8NEA4 188 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 GLYATL1Q969I3 302 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 OR52E6Q96RD3 313 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 RGCCQ9H4X1 137 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 ZNF358Q9NW07 568 aa5.95□□□□□ -1.46
SCN1A-212ENST00000636194 SH2D7A6NKC9 451 aaPredicted RBP5.94□□□□□ -1.46
SCN1A-212ENST00000636194 H7C2Y5 167 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 AGPSO00116 658 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 CPNE3O75131 537 aaKnown RBP5.94□□□□□ -1.46
SCN1A-212ENST00000636194 CYP11A1P05108 521 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 NUDT17P0C025 328 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 ATP1A3P13637 1013 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 HGFP14210 728 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 HTR2BP41595 481 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 GRIA1P42261 906 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 TKTL1P51854 596 aa5.94□□□□□ -1.46
SCN1A-212ENST00000636194 GALCP54803 685 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms