RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 KIAA0754O94854 1291 aa15.26■□□□□ 0.03
SNRNP48-203ENST00000634363 UBXN7O94888 489 aa15.26■□□□□ 0.03
SNRNP48-203ENST00000634363 CRTAMO95727 393 aa15.26■□□□□ 0.03
SNRNP48-203ENST00000634363 APRTP07741 180 aa15.26■□□□□ 0.03
SNRNP48-203ENST00000634363 GP1BBP13224 206 aa15.26■□□□□ 0.03
SNRNP48-203ENST00000634363 BPIP17213 487 aa15.26■□□□□ 0.03
SNRNP48-203ENST00000634363 CASQ1P31415 396 aa15.26■□□□□ 0.03
SNRNP48-203ENST00000634363 COILP38432 576 aaPredicted RBP15.26■□□□□ 0.03
SNRNP48-203ENST00000634363 FNTAP49354 379 aa15.26■□□□□ 0.03
SNRNP48-203ENST00000634363 SH3BP2P78314 561 aa15.26■□□□□ 0.03
SNRNP48-203ENST00000634363 PDE1BQ01064 536 aa15.26■□□□□ 0.03
SNRNP48-203ENST00000634363 KLRB1Q12918 225 aa15.26■□□□□ 0.03
SNRNP48-203ENST00000634363 TAF1AQ15573 450 aaPredicted RBP15.26■□□□□ 0.03
SNRNP48-203ENST00000634363 INSCQ1MX18 579 aa15.26■□□□□ 0.03
SNRNP48-203ENST00000634363 PDPK2PQ6A1A2 396 aa15.26■□□□□ 0.03
SNRNP48-203ENST00000634363 TTC27Q6P3X3 843 aa15.26■□□□□ 0.03
SNRNP48-203ENST00000634363 TRAM1L1Q8N609 369 aa15.26■□□□□ 0.03
SNRNP48-203ENST00000634363 DNAAF3Q8N9W5 541 aa15.26■□□□□ 0.03
SNRNP48-203ENST00000634363 TEX19Q8NA77 164 aa15.26■□□□□ 0.03
SNRNP48-203ENST00000634363 AVL9Q8NBF6 648 aa15.26■□□□□ 0.03
SNRNP48-203ENST00000634363 GPR26Q8NDV2 337 aa15.26■□□□□ 0.03
SNRNP48-203ENST00000634363 BRSK1Q8TDC3 778 aa15.26■□□□□ 0.03
SNRNP48-203ENST00000634363 STAMBPL1Q96FJ0 436 aa15.26■□□□□ 0.03
SNRNP48-203ENST00000634363 ARNT2Q9HBZ2 717 aa15.26■□□□□ 0.03
SNRNP48-203ENST00000634363 TRIM39Q9HCM9 518 aa15.26■□□□□ 0.03
SNRNP48-203ENST00000634363 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.26■□□□□ 0.03
SNRNP48-203ENST00000634363 OGFRQ9NZT2 677 aa15.26■□□□□ 0.03
SNRNP48-203ENST00000634363 SLC23A2Q9UGH3 650 aa15.26■□□□□ 0.03
SNRNP48-203ENST00000634363 CROTQ9UKG9 612 aa15.26■□□□□ 0.03
SNRNP48-203ENST00000634363 KCTD3Q9Y597 815 aa15.26■□□□□ 0.03
SNRNP48-203ENST00000634363 ARL5AQ9Y689 179 aa15.26■□□□□ 0.03
SNRNP48-203ENST00000634363 ZNF106Q9H2Y7 1883 aaKnown RBP15.26■□□□□ 0.03
SNRNP48-203ENST00000634363 PTPN13Q12923 2485 aa15.26■□□□□ 0.03
SNRNP48-203ENST00000634363 LILRA5A6NI73 299 aa15.25■□□□□ 0.03
SNRNP48-203ENST00000634363 PDZK1P1A8MUH7 402 aa15.25■□□□□ 0.03
SNRNP48-203ENST00000634363 MKRN2OSH3BPM6 223 aa15.25■□□□□ 0.03
SNRNP48-203ENST00000634363 K7EM74 188 aa15.25■□□□□ 0.03
SNRNP48-203ENST00000634363 BUD23O43709 281 aaKnown RBP15.25■□□□□ 0.03
SNRNP48-203ENST00000634363 C9P02748 559 aa15.25■□□□□ 0.03
SNRNP48-203ENST00000634363 FURINP09958 794 aa15.25■□□□□ 0.03
SNRNP48-203ENST00000634363 XRCC1P18887 633 aaPredicted RBP15.25■□□□□ 0.03
SNRNP48-203ENST00000634363 LPOP22079 712 aaPredicted RBP15.25■□□□□ 0.03
SNRNP48-203ENST00000634363 RPL10P27635 214 aaKnown RBP15.25■□□□□ 0.03
SNRNP48-203ENST00000634363 SPAM1P38567 509 aa15.25■□□□□ 0.03
SNRNP48-203ENST00000634363 SLC19A1P41440 591 aa15.25■□□□□ 0.03
SNRNP48-203ENST00000634363 PAFAH1B1P43034 410 aa15.25■□□□□ 0.03
SNRNP48-203ENST00000634363 LEPRP48357 1165 aaKnown RBP15.25■□□□□ 0.03
SNRNP48-203ENST00000634363 MLLT10P55197 1068 aa15.25■□□□□ 0.03
SNRNP48-203ENST00000634363 ETF1P62495 437 aaKnown RBP15.25■□□□□ 0.03
SNRNP48-203ENST00000634363 CDH17Q12864 832 aa15.25■□□□□ 0.03
SNRNP48-203ENST00000634363 DENND5AQ6IQ26 1287 aa15.25■□□□□ 0.03
SNRNP48-203ENST00000634363 TMEM26Q6ZUK4 368 aa15.25■□□□□ 0.03
SNRNP48-203ENST00000634363 SIDT1Q9NXL6 827 aaKnown RBP15.25■□□□□ 0.03
SNRNP48-203ENST00000634363 IL17CQ9P0M4 197 aa15.25■□□□□ 0.03
SNRNP48-203ENST00000634363 ZNF624Q9P2J8 865 aaPredicted RBP15.25■□□□□ 0.03
SNRNP48-203ENST00000634363 LNPEPQ9UIQ6 1025 aa15.25■□□□□ 0.03
SNRNP48-203ENST00000634363 MAN2B2Q9Y2E5 1009 aa15.25■□□□□ 0.03
SNRNP48-203ENST00000634363 MN1Q10571 1320 aaPredicted RBP15.24■□□□□ 0.03
SNRNP48-203ENST00000634363 GLYATL1P3A0A0U1RQE8 302 aa15.24■□□□□ 0.03
SNRNP48-203ENST00000634363 PIPSLA2A3N6 862 aa15.24■□□□□ 0.03
SNRNP48-203ENST00000634363 CDC14CA4D256 554 aa15.24■□□□□ 0.03
SNRNP48-203ENST00000634363 MTX2O75431 263 aa15.24■□□□□ 0.03
SNRNP48-203ENST00000634363 SUN1O94901 812 aa15.24■□□□□ 0.03
SNRNP48-203ENST00000634363 KRT14P02533 472 aa15.24■□□□□ 0.03
SNRNP48-203ENST00000634363 NTRK1P04629 796 aa15.24■□□□□ 0.03
SNRNP48-203ENST00000634363 ANKRD34CP0C6C1 535 aa15.24■□□□□ 0.03
SNRNP48-203ENST00000634363 CCNYL3P0C7X3 344 aa15.24■□□□□ 0.03
SNRNP48-203ENST00000634363 VPS41P49754 854 aa15.24■□□□□ 0.03
SNRNP48-203ENST00000634363 UBE2IP63279 158 aaKnown RBP15.24■□□□□ 0.03
SNRNP48-203ENST00000634363 MAP7Q14244 749 aa15.24■□□□□ 0.03
SNRNP48-203ENST00000634363 POU6F1Q14863 301 aa15.24■□□□□ 0.03
SNRNP48-203ENST00000634363 TRIP13Q15645 432 aaPredicted RBP15.24■□□□□ 0.03
SNRNP48-203ENST00000634363 CRTC2Q53ET0 693 aaPredicted RBP15.24■□□□□ 0.03
SNRNP48-203ENST00000634363 CACHD1Q5VU97 1274 aa15.24■□□□□ 0.03
SNRNP48-203ENST00000634363 SYT10Q6XYQ8 523 aa15.24■□□□□ 0.03
SNRNP48-203ENST00000634363 FAM92BQ6ZTR7 304 aa15.24■□□□□ 0.03
SNRNP48-203ENST00000634363 ADGRG6Q86SQ4 1221 aa15.24■□□□□ 0.03
SNRNP48-203ENST00000634363 TMEM135Q86UB9 458 aa15.24■□□□□ 0.03
SNRNP48-203ENST00000634363 FAM26EQ8N5C1 309 aa15.24■□□□□ 0.03
SNRNP48-203ENST00000634363 OR52K1Q8NGK4 314 aa15.24■□□□□ 0.03
SNRNP48-203ENST00000634363 EIF2B3Q9NR50 452 aaKnown RBP15.24■□□□□ 0.03
SNRNP48-203ENST00000634363 PIH1D1Q9NWS0 290 aaKnown RBP15.24■□□□□ 0.03
SNRNP48-203ENST00000634363 RNF14Q9UBS8 474 aa15.24■□□□□ 0.03
SNRNP48-203ENST00000634363 POLHQ9Y253 713 aa15.24■□□□□ 0.03
SNRNP48-203ENST00000634363 COL12A1Q99715 3063 aa15.24■□□□□ 0.03
SNRNP48-203ENST00000634363 BSNQ9UPA5 3926 aa15.24■□□□□ 0.03
SNRNP48-203ENST00000634363 BLACEA4D250 179 aa15.23■□□□□ 0.03
SNRNP48-203ENST00000634363 KMOO15229 486 aa15.23■□□□□ 0.03
SNRNP48-203ENST00000634363 KIF1CO43896 1103 aaKnown RBP15.23■□□□□ 0.03
SNRNP48-203ENST00000634363 ZNF7P17097 686 aaPredicted RBP15.23■□□□□ 0.03
SNRNP48-203ENST00000634363 TPH1P17752 444 aa15.23■□□□□ 0.03
SNRNP48-203ENST00000634363 HADHAP40939 763 aa15.23■□□□□ 0.03
SNRNP48-203ENST00000634363 CLCNKAP51800 687 aa15.23■□□□□ 0.03
SNRNP48-203ENST00000634363 DRG2P55039 364 aaKnown RBP15.23■□□□□ 0.03
SNRNP48-203ENST00000634363 GPS1Q13098 491 aa15.23■□□□□ 0.03
SNRNP48-203ENST00000634363 IL11RAQ14626 422 aa15.23■□□□□ 0.03
SNRNP48-203ENST00000634363 PPP1R7Q15435 360 aa15.23■□□□□ 0.03
SNRNP48-203ENST00000634363 IRGCQ6NXR0 463 aa15.23■□□□□ 0.03
SNRNP48-203ENST00000634363 FAM151BQ6UXP7 276 aa15.23■□□□□ 0.03
SNRNP48-203ENST00000634363 ASB18Q6ZVZ8 466 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms