RNA–Protein interactions for RNA: ENST00000633813.1

LINC00254-202, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-202ENST00000633813 HMGA1P17096 107 aaKnown RBP5.71□□□□□ -1.5
LINC00254-202ENST00000633813 DNAJB1P25685 340 aa5.71□□□□□ -1.5
LINC00254-202ENST00000633813 CHRNA3P32297 505 aa5.71□□□□□ -1.5
LINC00254-202ENST00000633813 CA8P35219 290 aa5.71□□□□□ -1.5
LINC00254-202ENST00000633813 GJC1P36383 396 aa5.71□□□□□ -1.5
LINC00254-202ENST00000633813 PGFP49763 221 aa5.71□□□□□ -1.5
LINC00254-202ENST00000633813 ARSEP51690 589 aa5.71□□□□□ -1.5
LINC00254-202ENST00000633813 CDH6P55285 790 aa5.71□□□□□ -1.5
LINC00254-202ENST00000633813 TBX4P57082 545 aa5.71□□□□□ -1.5
LINC00254-202ENST00000633813 PITX1P78337 314 aaPredicted RBP5.71□□□□□ -1.5
LINC00254-202ENST00000633813 NME3Q13232 169 aa5.71□□□□□ -1.5
LINC00254-202ENST00000633813 MTA1Q13330 715 aa5.71□□□□□ -1.5
LINC00254-202ENST00000633813 PLD1Q13393 1074 aa5.71□□□□□ -1.5
LINC00254-202ENST00000633813 GPM6BQ13491 265 aa5.71□□□□□ -1.5
LINC00254-202ENST00000633813 CAMK1Q14012 370 aa5.71□□□□□ -1.5
LINC00254-202ENST00000633813 TFDP2Q14188 446 aa5.71□□□□□ -1.5
LINC00254-202ENST00000633813 RAB30Q15771 203 aa5.71□□□□□ -1.5
LINC00254-202ENST00000633813 TAF12Q16514 161 aa5.71□□□□□ -1.5
LINC00254-202ENST00000633813 DPYSL2Q16555 572 aa5.71□□□□□ -1.5
LINC00254-202ENST00000633813 SMTNL2Q2TAL5 461 aa5.71□□□□□ -1.5
LINC00254-202ENST00000633813 RAB6CQ53S08 254 aa5.71□□□□□ -1.5
LINC00254-202ENST00000633813 BRMS1LQ5PSV4 323 aa5.71□□□□□ -1.5
LINC00254-202ENST00000633813 PRAMEF17Q5VTA0 474 aa5.71□□□□□ -1.5
LINC00254-202ENST00000633813 OTUD1Q5VV17 481 aaPredicted RBP5.71□□□□□ -1.5
LINC00254-202ENST00000633813 CCDC70Q6NSX1 233 aa5.71□□□□□ -1.5
LINC00254-202ENST00000633813 AADACL2Q6P093 401 aa5.71□□□□□ -1.5
LINC00254-202ENST00000633813 MSANTD2Q6P1R3 559 aa5.71□□□□□ -1.5
LINC00254-202ENST00000633813 MFSD7Q6UXD7 560 aa5.71□□□□□ -1.5
LINC00254-202ENST00000633813 PTCHD4Q6ZW05 846 aa5.71□□□□□ -1.5
LINC00254-202ENST00000633813 MAATS1Q7Z4T9 603 aa5.71□□□□□ -1.5
LINC00254-202ENST00000633813 DNAJB7Q7Z6W7 309 aaPredicted RBP5.71□□□□□ -1.5
LINC00254-202ENST00000633813 TADA2BQ86TJ2 420 aa5.71□□□□□ -1.5
LINC00254-202ENST00000633813 ITIH5Q86UX2 942 aa5.71□□□□□ -1.5
LINC00254-202ENST00000633813 FAM131BQ86XD5 332 aa5.71□□□□□ -1.5
LINC00254-202ENST00000633813 ATP11CQ8NB49 1132 aa5.71□□□□□ -1.5
LINC00254-202ENST00000633813 NOA1Q8NC60 698 aaKnown RBP5.71□□□□□ -1.5
LINC00254-202ENST00000633813 STKLD1Q8NE28 680 aa5.71□□□□□ -1.5
LINC00254-202ENST00000633813 DQX1Q8TE96 717 aaKnown RBP5.71□□□□□ -1.5
LINC00254-202ENST00000633813 HDAC7Q8WUI4 952 aa5.71□□□□□ -1.5
LINC00254-202ENST00000633813 HSPH1Q92598 858 aa5.71□□□□□ -1.5
LINC00254-202ENST00000633813 PSMG2Q969U7 264 aa5.71□□□□□ -1.5
LINC00254-202ENST00000633813 NTAN1Q96AB6 310 aa5.71□□□□□ -1.5
LINC00254-202ENST00000633813 RUNDC3BQ96NL0 473 aa5.71□□□□□ -1.5
LINC00254-202ENST00000633813 LENG8Q96PV6 779 aaPredicted RBP5.71□□□□□ -1.5
LINC00254-202ENST00000633813 HIST1H2AAQ96QV6 131 aa5.71□□□□□ -1.5
LINC00254-202ENST00000633813 SNX18Q96RF0 628 aa5.71□□□□□ -1.5
LINC00254-202ENST00000633813 ZNF670Q9BS34 389 aa5.71□□□□□ -1.5
LINC00254-202ENST00000633813 THAP7Q9BT49 309 aaPredicted RBP5.71□□□□□ -1.5
LINC00254-202ENST00000633813 SNRNP25Q9BV90 132 aaKnown RBP5.71□□□□□ -1.5
LINC00254-202ENST00000633813 AP1M1Q9BXS5 423 aa5.71□□□□□ -1.5
LINC00254-202ENST00000633813 MAK16Q9BXY0 300 aaKnown RBP5.71□□□□□ -1.5
LINC00254-202ENST00000633813 CIPCQ9C0C6 399 aa5.71□□□□□ -1.5
LINC00254-202ENST00000633813 RAB6CQ9H0N0 254 aa5.71□□□□□ -1.5
LINC00254-202ENST00000633813 PLEKHA4Q9H4M7 779 aa5.71□□□□□ -1.5
LINC00254-202ENST00000633813 LRRC19Q9H756 370 aa5.71□□□□□ -1.5
LINC00254-202ENST00000633813 PRDM16Q9HAZ2 1276 aa5.71□□□□□ -1.5
LINC00254-202ENST00000633813 NMUR1Q9HB89 426 aa5.71□□□□□ -1.5
LINC00254-202ENST00000633813 WDR6Q9NNW5 1121 aaKnown RBP5.71□□□□□ -1.5
LINC00254-202ENST00000633813 PIGVQ9NUD9 493 aa5.71□□□□□ -1.5
LINC00254-202ENST00000633813 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.71□□□□□ -1.5
LINC00254-202ENST00000633813 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.71□□□□□ -1.5
LINC00254-202ENST00000633813 OSER1Q9NX31 292 aa5.71□□□□□ -1.5
LINC00254-202ENST00000633813 SMARCAL1Q9NZC9 954 aa5.71□□□□□ -1.5
LINC00254-202ENST00000633813 RCOR3Q9P2K3 495 aaPredicted RBP5.71□□□□□ -1.5
LINC00254-202ENST00000633813 UXTQ9UBK9 157 aaPredicted RBP5.71□□□□□ -1.5
LINC00254-202ENST00000633813 FZD10Q9ULW2 581 aa5.71□□□□□ -1.5
LINC00254-202ENST00000633813 MAGED2Q9UNF1 606 aaPredicted RBP5.71□□□□□ -1.5
LINC00254-202ENST00000633813 YIPF1Q9Y548 306 aa5.71□□□□□ -1.5
LINC00254-202ENST00000633813 INSL5Q9Y5Q6 135 aa5.71□□□□□ -1.5
LINC00254-202ENST00000633813 VWA8A3KMH1 1905 aa5.71□□□□□ -1.5
LINC00254-202ENST00000633813 SYNJ2BP-COX16A0A087WUM0 186 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 UQCRHLA0A096LP55 91 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 TARSL2A2RTX5 802 aaKnown RBP5.7□□□□□ -1.5
LINC00254-202ENST00000633813 ZNF840PA6NDX5 716 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 HIDE1A8MVS5 230 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 H0YGN5 161 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 IRAK2O43187 625 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 TMPRSS11DO60235 418 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 GLUD1P00367 558 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 UQCRHP07919 91 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 CD48P09326 243 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 SLC2A3P11169 496 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 RARGP13631 454 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 KRT10P13645 584 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 CREB1P16220 341 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 IL4RP24394 825 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 HOXA9P31269 272 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 CCR1P32246 355 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 ATP5C1P36542 298 aaKnown RBP5.7□□□□□ -1.5
LINC00254-202ENST00000633813 HCAR3P49019 387 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 TUBP50607 506 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 CLCN4P51793 760 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 TUBA4AP68366 448 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 C2orf54Q08AI8 447 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 TWF1Q12792 350 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 DPYSL3Q14195 570 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 KRT81Q14533 505 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 SIX1Q15475 284 aaPredicted RBP5.7□□□□□ -1.5
LINC00254-202ENST00000633813 CCNG2Q16589 344 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 ST3GAL2Q16842 350 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms