RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 GDE1Q9NZC3 331 aa21.68■■□□□ 1.06
PNKP-220ENST00000627232 NDUFAF1Q9Y375 327 aa21.68■■□□□ 1.06
PNKP-220ENST00000627232 PCDHGA7Q9Y5G6 932 aa21.68■■□□□ 1.06
PNKP-220ENST00000627232 PSMD11O00231 422 aa21.67■■□□□ 1.06
PNKP-220ENST00000627232 TRIM38O00635 465 aa21.67■■□□□ 1.06
PNKP-220ENST00000627232 SLC16A5O15375 505 aa21.67■■□□□ 1.06
PNKP-220ENST00000627232 NVLO15381 856 aaKnown RBP21.67■■□□□ 1.06
PNKP-220ENST00000627232 CFLARO15519 480 aa21.67■■□□□ 1.06
PNKP-220ENST00000627232 GUCA1CO95843 209 aa21.67■■□□□ 1.06
PNKP-220ENST00000627232 AKT1P31749 480 aa21.67■■□□□ 1.06
PNKP-220ENST00000627232 MMP12P39900 470 aa21.67■■□□□ 1.06
PNKP-220ENST00000627232 DPP6P42658 865 aa21.67■■□□□ 1.06
PNKP-220ENST00000627232 PIK3CGP48736 1102 aa21.67■■□□□ 1.06
PNKP-220ENST00000627232 HSPA7P48741 367 aa21.67■■□□□ 1.06
PNKP-220ENST00000627232 THOP1P52888 689 aa21.67■■□□□ 1.06
PNKP-220ENST00000627232 TRAF3Q13114 568 aa21.67■■□□□ 1.06
PNKP-220ENST00000627232 CEACAM7Q14002 265 aa21.67■■□□□ 1.06
PNKP-220ENST00000627232 PDGFRLQ15198 375 aa21.67■■□□□ 1.06
PNKP-220ENST00000627232 TLDC1Q6P9B6 456 aa21.67■■□□□ 1.06
PNKP-220ENST00000627232 Q6ZVL8 140 aa21.67■■□□□ 1.06
PNKP-220ENST00000627232 NEK10Q6ZWH5 1172 aa21.67■■□□□ 1.06
PNKP-220ENST00000627232 NRSN1Q8IZ57 195 aa21.67■■□□□ 1.06
PNKP-220ENST00000627232 CDYL2Q8N8U2 506 aa21.67■■□□□ 1.06
PNKP-220ENST00000627232 PCYOX1LQ8NBM8 494 aa21.67■■□□□ 1.06
PNKP-220ENST00000627232 PPFIBP2Q8ND30 876 aa21.67■■□□□ 1.06
PNKP-220ENST00000627232 VN1R2Q8NFZ6 395 aa21.67■■□□□ 1.06
PNKP-220ENST00000627232 FGF13Q92913 245 aa21.67■■□□□ 1.06
PNKP-220ENST00000627232 ATP6V1E2Q96A05 226 aa21.67■■□□□ 1.06
PNKP-220ENST00000627232 VPS35Q96QK1 796 aa21.67■■□□□ 1.06
PNKP-220ENST00000627232 FAM83CQ9BQN1 747 aa21.67■■□□□ 1.06
PNKP-220ENST00000627232 TMEM79Q9BSE2 394 aa21.67■■□□□ 1.06
PNKP-220ENST00000627232 IPPKQ9H8X2 491 aa21.67■■□□□ 1.06
PNKP-220ENST00000627232 AIG1Q9NVV5 245 aa21.67■■□□□ 1.06
PNKP-220ENST00000627232 THG1LQ9NWX6 298 aaKnown RBP21.67■■□□□ 1.06
PNKP-220ENST00000627232 DEC1Q9P2X7 70 aa21.67■■□□□ 1.06
PNKP-220ENST00000627232 OPTCQ9UBM4 332 aa21.67■■□□□ 1.06
PNKP-220ENST00000627232 GIMAP2Q9UG22 337 aa21.67■■□□□ 1.06
PNKP-220ENST00000627232 MCM8Q9UJA3 840 aa21.67■■□□□ 1.06
PNKP-220ENST00000627232 GPR45Q9Y5Y3 372 aa21.67■■□□□ 1.06
PNKP-220ENST00000627232 EDDM13A0A1B0GTR0 161 aa21.66■■□□□ 1.06
PNKP-220ENST00000627232 HEPACAM2A8MVW5 462 aa21.66■■□□□ 1.06
PNKP-220ENST00000627232 ANXA5P08758 320 aa21.66■■□□□ 1.06
PNKP-220ENST00000627232 ERVK-8P63133 956 aa21.66■■□□□ 1.06
PNKP-220ENST00000627232 SP140Q13342 867 aa21.66■■□□□ 1.06
PNKP-220ENST00000627232 RPS6KA2Q15349 733 aa21.66■■□□□ 1.06
PNKP-220ENST00000627232 SHHQ15465 462 aa21.66■■□□□ 1.06
PNKP-220ENST00000627232 TAF11Q15544 211 aa21.66■■□□□ 1.06
PNKP-220ENST00000627232 ZNF284Q2VY69 593 aa21.66■■□□□ 1.06
PNKP-220ENST00000627232 COQ5Q5HYK3 327 aa21.66■■□□□ 1.06
PNKP-220ENST00000627232 LIPIQ6XZB0 460 aa21.66■■□□□ 1.06
PNKP-220ENST00000627232 KBTBD6Q86V97 674 aa21.66■■□□□ 1.06
PNKP-220ENST00000627232 TCAIMQ8N3R3 496 aa21.66■■□□□ 1.06
PNKP-220ENST00000627232 TMIEQ8NEW7 156 aa21.66■■□□□ 1.06
PNKP-220ENST00000627232 OR4F6Q8NGB9 312 aa21.66■■□□□ 1.06
PNKP-220ENST00000627232 OR9I1Q8NGQ6 314 aa21.66■■□□□ 1.06
PNKP-220ENST00000627232 METTL6Q8TCB7 284 aa21.66■■□□□ 1.06
PNKP-220ENST00000627232 SLC26A7Q8TE54 656 aa21.66■■□□□ 1.06
PNKP-220ENST00000627232 SCAMP4Q969E2 229 aa21.66■■□□□ 1.06
PNKP-220ENST00000627232 BRINP2Q9C0B6 783 aa21.66■■□□□ 1.06
PNKP-220ENST00000627232 EBF3Q9H4W6 596 aa21.66■■□□□ 1.06
PNKP-220ENST00000627232 PPM1HQ9ULR3 514 aa21.66■■□□□ 1.06
PNKP-220ENST00000627232 ANGPTL3Q9Y5C1 460 aa21.66■■□□□ 1.06
PNKP-220ENST00000627232 PRRT4C9JH25 899 aa21.65■■□□□ 1.06
PNKP-220ENST00000627232 K7EPI3 171 aa21.65■■□□□ 1.06
PNKP-220ENST00000627232 CAPN1P07384 714 aa21.65■■□□□ 1.06
PNKP-220ENST00000627232 MSH3P20585 1137 aa21.65■■□□□ 1.06
PNKP-220ENST00000627232 ETV3P41162 512 aa21.65■■□□□ 1.06
PNKP-220ENST00000627232 SLC6A11P48066 632 aa21.65■■□□□ 1.06
PNKP-220ENST00000627232 PDCD4Q53EL6 469 aaKnown RBP21.65■■□□□ 1.06
PNKP-220ENST00000627232 LDLRAP1Q5SW96 308 aa21.65■■□□□ 1.06
PNKP-220ENST00000627232 C8orf82Q6P1X6 216 aaPredicted RBP21.65■■□□□ 1.06
PNKP-220ENST00000627232 PARS2Q7L3T8 475 aaKnown RBP21.65■■□□□ 1.06
PNKP-220ENST00000627232 MILR1Q7Z6M3 343 aa21.65■■□□□ 1.06
PNKP-220ENST00000627232 NXPE3Q969Y0 559 aa21.65■■□□□ 1.06
PNKP-220ENST00000627232 RSRC1Q96IZ7 334 aaKnown RBP21.65■■□□□ 1.06
PNKP-220ENST00000627232 RIOK2Q9BVS4 552 aaKnown RBP21.65■■□□□ 1.06
PNKP-220ENST00000627232 SLC12A9Q9BXP2 914 aa21.65■■□□□ 1.06
PNKP-220ENST00000627232 TRIM54Q9BYV2 358 aa21.65■■□□□ 1.06
PNKP-220ENST00000627232 ABCG8Q9H221 673 aa21.65■■□□□ 1.06
PNKP-220ENST00000627232 NMRK1Q9NWW6 199 aa21.65■■□□□ 1.06
PNKP-220ENST00000627232 CROTQ9UKG9 612 aa21.65■■□□□ 1.06
PNKP-220ENST00000627232 FTH1P02794 183 aa21.65■■□□□ 1.06
PNKP-220ENST00000627232 GGT5P36269 586 aa21.65■■□□□ 1.06
PNKP-220ENST00000627232 HNRNPA1L2Q32P51 320 aaKnown RBP21.65■■□□□ 1.06
PNKP-220ENST00000627232 FNDC3BQ53EP0 1204 aaKnown RBP21.65■■□□□ 1.06
PNKP-220ENST00000627232 RARS2Q5T160 578 aaKnown RBP21.65■■□□□ 1.06
PNKP-220ENST00000627232 OR2T11Q8NH01 316 aa21.65■■□□□ 1.06
PNKP-220ENST00000627232 BTN2A2Q8WVV5 523 aa21.65■■□□□ 1.06
PNKP-220ENST00000627232 DNAJC9Q8WXX5 260 aa21.65■■□□□ 1.06
PNKP-220ENST00000627232 OR8D1Q8WZ84 308 aa21.65■■□□□ 1.06
PNKP-220ENST00000627232 ACOX2Q99424 681 aa21.65■■□□□ 1.06
PNKP-220ENST00000627232 NTMT1Q9BV86 223 aa21.65■■□□□ 1.06
PNKP-220ENST00000627232 CERS4Q9HA82 394 aa21.65■■□□□ 1.06
PNKP-220ENST00000627232 SUN2Q9UH99 717 aa21.65■■□□□ 1.06
PNKP-220ENST00000627232 H0Y858 1186 aa21.64■■□□□ 1.05
PNKP-220ENST00000627232 BCAS2O75934 225 aaPredicted RBP21.64■■□□□ 1.05
PNKP-220ENST00000627232 WDR47O94967 919 aa21.64■■□□□ 1.05
PNKP-220ENST00000627232 ELFN1P0C7U0 828 aa21.64■■□□□ 1.05
PNKP-220ENST00000627232 XRCC1P18887 633 aaPredicted RBP21.64■■□□□ 1.05
PNKP-220ENST00000627232 ITGB7P26010 798 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms