RNA–Protein interactions for RNA: ENST00000625767.1

CCNA1-203, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-203ENST00000625767 UCKL1Q9NWZ5 548 aa16.29■□□□□ 0.2
CCNA1-203ENST00000625767 IKZF3Q9UKT9 509 aa16.29■□□□□ 0.2
CCNA1-203ENST00000625767 RAB23Q9ULC3 237 aa16.29■□□□□ 0.2
CCNA1-203ENST00000625767 PSMD13Q9UNM6 376 aa16.29■□□□□ 0.2
CCNA1-203ENST00000625767 A0A096LPK6 155 aa16.28■□□□□ 0.2
CCNA1-203ENST00000625767 SLC5A10A0PJK1 596 aa16.28■□□□□ 0.2
CCNA1-203ENST00000625767 MGAT4DA6NG13 374 aa16.28■□□□□ 0.2
CCNA1-203ENST00000625767 QSOX1O00391 747 aa16.28■□□□□ 0.2
CCNA1-203ENST00000625767 MAGEC1O60732 1142 aa16.28■□□□□ 0.2
CCNA1-203ENST00000625767 GPC4O75487 556 aa16.28■□□□□ 0.2
CCNA1-203ENST00000625767 TSPAN12O95859 305 aa16.28■□□□□ 0.2
CCNA1-203ENST00000625767 MYZAPP0CAP1 466 aa16.28■□□□□ 0.2
CCNA1-203ENST00000625767 ZNF37AP17032 561 aaPredicted RBP16.28■□□□□ 0.2
CCNA1-203ENST00000625767 SLC12A2P55011 1212 aa16.28■□□□□ 0.2
CCNA1-203ENST00000625767 BNIP3Q12983 259 aa16.28■□□□□ 0.2
CCNA1-203ENST00000625767 LGSNQ5TDP6 509 aa16.28■□□□□ 0.2
CCNA1-203ENST00000625767 TIFABQ6ZNK6 161 aa16.28■□□□□ 0.2
CCNA1-203ENST00000625767 PIWIL4Q7Z3Z4 852 aaKnown RBP16.28■□□□□ 0.2
CCNA1-203ENST00000625767 CENPLQ8N0S6 344 aaPredicted RBP16.28■□□□□ 0.2
CCNA1-203ENST00000625767 HM13Q8TCT9 377 aa16.28■□□□□ 0.2
CCNA1-203ENST00000625767 MTBPQ96DY7 904 aa16.28■□□□□ 0.2
CCNA1-203ENST00000625767 PRRX2Q99811 253 aa16.28■□□□□ 0.2
CCNA1-203ENST00000625767 SH3GL2Q99962 352 aa16.28■□□□□ 0.2
CCNA1-203ENST00000625767 TIMM29Q9BSF4 260 aa16.28■□□□□ 0.2
CCNA1-203ENST00000625767 C12orf65Q9H3J6 166 aaKnown RBP16.28■□□□□ 0.2
CCNA1-203ENST00000625767 LATS2Q9NRM7 1088 aa16.28■□□□□ 0.2
CCNA1-203ENST00000625767 WDR37Q9Y2I8 494 aa16.28■□□□□ 0.2
CCNA1-203ENST00000625767 EP300Q09472 2414 aaPredicted RBP16.28■□□□□ 0.2
CCNA1-203ENST00000625767 SNX2O60749 519 aa16.27■□□□□ 0.2
CCNA1-203ENST00000625767 SYF2O95926 243 aaKnown RBP16.27■□□□□ 0.2
CCNA1-203ENST00000625767 MT-ND3P03897 115 aa16.27■□□□□ 0.2
CCNA1-203ENST00000625767 HOXD12P35452 270 aa16.27■□□□□ 0.2
CCNA1-203ENST00000625767 GBX1Q14549 363 aa16.27■□□□□ 0.2
CCNA1-203ENST00000625767 SYTL3Q4VX76 610 aa16.27■□□□□ 0.2
CCNA1-203ENST00000625767 LAIR1Q6GTX8 287 aa16.27■□□□□ 0.2
CCNA1-203ENST00000625767 SLC23A3Q6PIS1 610 aa16.27■□□□□ 0.2
CCNA1-203ENST00000625767 KCTD4Q8WVF5 259 aa16.27■□□□□ 0.2
CCNA1-203ENST00000625767 LOXL4Q96JB6 756 aa16.27■□□□□ 0.2
CCNA1-203ENST00000625767 SLC13A1Q9BZW2 595 aa16.27■□□□□ 0.2
CCNA1-203ENST00000625767 PRDM8Q9NQV8 689 aa16.27■□□□□ 0.2
CCNA1-203ENST00000625767 TBC1D29Q9UFV1 150 aa16.27■□□□□ 0.2
CCNA1-203ENST00000625767 NOVA2Q9UNW9 492 aaKnown RBP16.27■□□□□ 0.2
CCNA1-203ENST00000625767 DMXL1Q9Y485 3027 aa16.27■□□□□ 0.2
CCNA1-203ENST00000625767 GOLGA4Q13439 2230 aaKnown RBP16.27■□□□□ 0.2
CCNA1-203ENST00000625767 KRT87PA6NCN2 255 aa16.27■□□□□ 0.19
CCNA1-203ENST00000625767 CCDC166P0CW27 439 aa16.27■□□□□ 0.19
CCNA1-203ENST00000625767 CTSEP14091 401 aa16.27■□□□□ 0.19
CCNA1-203ENST00000625767 KRT4P19013 534 aa16.27■□□□□ 0.19
CCNA1-203ENST00000625767 CD9P21926 228 aa16.27■□□□□ 0.19
CCNA1-203ENST00000625767 ACTR1BP42025 376 aa16.27■□□□□ 0.19
CCNA1-203ENST00000625767 ACTR1AP61163 376 aa16.27■□□□□ 0.19
CCNA1-203ENST00000625767 CSHL1Q14406 222 aa16.27■□□□□ 0.19
CCNA1-203ENST00000625767 HLA-BQ31612 363 aa16.27■□□□□ 0.19
CCNA1-203ENST00000625767 PLA2G2CQ5R387 149 aa16.27■□□□□ 0.19
CCNA1-203ENST00000625767 CDHR3Q6ZTQ4 885 aa16.27■□□□□ 0.19
CCNA1-203ENST00000625767 EXOC3L1Q86VI1 746 aa16.27■□□□□ 0.19
CCNA1-203ENST00000625767 LMX1AQ8TE12 382 aa16.27■□□□□ 0.19
CCNA1-203ENST00000625767 PATE1Q8WXA2 126 aa16.27■□□□□ 0.19
CCNA1-203ENST00000625767 INPP5DQ92835 1189 aa16.27■□□□□ 0.19
CCNA1-203ENST00000625767 SKA1Q96BD8 255 aa16.27■□□□□ 0.19
CCNA1-203ENST00000625767 LINGO1Q96FE5 620 aa16.27■□□□□ 0.19
CCNA1-203ENST00000625767 PGM2Q96G03 612 aa16.27■□□□□ 0.19
CCNA1-203ENST00000625767 PHOX2BQ99453 314 aa16.27■□□□□ 0.19
CCNA1-203ENST00000625767 ELF4Q99607 663 aaPredicted RBP16.27■□□□□ 0.19
CCNA1-203ENST00000625767 TRNAU1APQ9NX07 287 aaKnown RBP16.27■□□□□ 0.19
CCNA1-203ENST00000625767 SCHIP1Q9P0W5 487 aaPredicted RBP16.27■□□□□ 0.19
CCNA1-203ENST00000625767 RAPGEFL1Q9UHV5 662 aa16.27■□□□□ 0.19
CCNA1-203ENST00000625767 SLC6A14Q9UN76 642 aa16.27■□□□□ 0.19
CCNA1-203ENST00000625767 CFAP20Q9Y6A4 193 aaKnown RBP16.27■□□□□ 0.19
CCNA1-203ENST00000625767 ZFHX2Q9C0A1 2572 aaPredicted RBP16.26■□□□□ 0.19
CCNA1-203ENST00000625767 C17orf113A0A1B0GUU1 675 aa16.26■□□□□ 0.19
CCNA1-203ENST00000625767 SPAG7O75391 227 aa16.26■□□□□ 0.19
CCNA1-203ENST00000625767 BRAFP15056 766 aa16.26■□□□□ 0.19
CCNA1-203ENST00000625767 CRABP2P29373 138 aa16.26■□□□□ 0.19
CCNA1-203ENST00000625767 DMPKQ09013 629 aa16.26■□□□□ 0.19
CCNA1-203ENST00000625767 SF3A2Q15428 464 aaKnown RBP16.26■□□□□ 0.19
CCNA1-203ENST00000625767 METRNLQ641Q3 311 aa16.26■□□□□ 0.19
CCNA1-203ENST00000625767 ZNF548Q8NEK5 533 aaPredicted RBP16.26■□□□□ 0.19
CCNA1-203ENST00000625767 CEP76Q8TAP6 659 aa16.26■□□□□ 0.19
CCNA1-203ENST00000625767 GPBAR1Q8TDU6 330 aa16.26■□□□□ 0.19
CCNA1-203ENST00000625767 ASZ1Q8WWH4 475 aa16.26■□□□□ 0.19
CCNA1-203ENST00000625767 NXNL1Q96CM4 212 aa16.26■□□□□ 0.19
CCNA1-203ENST00000625767 TSPAN17Q96FV3 270 aa16.26■□□□□ 0.19
CCNA1-203ENST00000625767 UBXN10Q96LJ8 280 aa16.26■□□□□ 0.19
CCNA1-203ENST00000625767 TSSK1BQ9BXA7 367 aa16.26■□□□□ 0.19
CCNA1-203ENST00000625767 WWP1Q9H0M0 922 aa16.26■□□□□ 0.19
CCNA1-203ENST00000625767 OR52A5Q9H2C5 316 aa16.26■□□□□ 0.19
CCNA1-203ENST00000625767 IGSF5Q9NSI5 407 aa16.26■□□□□ 0.19
CCNA1-203ENST00000625767 GMEB2Q9UKD1 530 aa16.26■□□□□ 0.19
CCNA1-203ENST00000625767 DNMT3AQ9Y6K1 912 aaPredicted RBP16.26■□□□□ 0.19
CCNA1-203ENST00000625767 ZNF292O60281 2723 aa16.25■□□□□ 0.19
CCNA1-203ENST00000625767 PRAMEF33A0A0G2JMD5 474 aa16.25■□□□□ 0.19
CCNA1-203ENST00000625767 PIAS2O75928 621 aa16.25■□□□□ 0.19
CCNA1-203ENST00000625767 SLCO2B1O94956 709 aa16.25■□□□□ 0.19
CCNA1-203ENST00000625767 APOA4P06727 396 aa16.25■□□□□ 0.19
CCNA1-203ENST00000625767 CCNFP41002 786 aa16.25■□□□□ 0.19
CCNA1-203ENST00000625767 SKIV2L2P42285 1042 aaKnown RBP16.25■□□□□ 0.19
CCNA1-203ENST00000625767 GLRBP48167 497 aa16.25■□□□□ 0.19
CCNA1-203ENST00000625767 CLCNKAP51800 687 aa16.25■□□□□ 0.19
CCNA1-203ENST00000625767 DNAJC3Q13217 504 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms