RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 TGFBIQ15582 683 aa6.9□□□□□ -1.31
SRGAP3-213ENST00000618999 ATP6AP1LQ52LC2 224 aa6.9□□□□□ -1.31
SRGAP3-213ENST00000618999 TECRLQ5HYJ1 363 aa6.9□□□□□ -1.31
SRGAP3-213ENST00000618999 RBM20Q5T481 1227 aaKnown RBP6.9□□□□□ -1.31
SRGAP3-213ENST00000618999 GPR158Q5T848 1215 aa6.9□□□□□ -1.31
SRGAP3-213ENST00000618999 HMBOX1Q6NT76 420 aa6.9□□□□□ -1.31
SRGAP3-213ENST00000618999 MSANTD2Q6P1R3 559 aa6.9□□□□□ -1.31
SRGAP3-213ENST00000618999 THAP5Q7Z6K1 395 aa6.9□□□□□ -1.31
SRGAP3-213ENST00000618999 PROSER1Q86XN7 944 aa6.9□□□□□ -1.31
SRGAP3-213ENST00000618999 PLD3Q8IV08 490 aa6.9□□□□□ -1.31
SRGAP3-213ENST00000618999 DENND1CQ8IV53 801 aa6.9□□□□□ -1.31
SRGAP3-213ENST00000618999 NPWQ8N729 165 aa6.9□□□□□ -1.31
SRGAP3-213ENST00000618999 OR7A2PQ8NGA2 310 aa6.9□□□□□ -1.31
SRGAP3-213ENST00000618999 POF1BQ8WVV4 589 aa6.9□□□□□ -1.31
SRGAP3-213ENST00000618999 S100ZQ8WXG8 99 aa6.9□□□□□ -1.31
SRGAP3-213ENST00000618999 CCDC74AQ96AQ1 378 aa6.9□□□□□ -1.31
SRGAP3-213ENST00000618999 CDK5RAP1Q96SZ6 601 aaKnown RBP6.9□□□□□ -1.31
SRGAP3-213ENST00000618999 CERS4Q9HA82 394 aa6.9□□□□□ -1.31
SRGAP3-213ENST00000618999 RC3H2Q9HBD1 1191 aaKnown RBP6.9□□□□□ -1.31
SRGAP3-213ENST00000618999 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.9□□□□□ -1.31
SRGAP3-213ENST00000618999 SLC2A6Q9UGQ3 507 aa6.9□□□□□ -1.31
SRGAP3-213ENST00000618999 DGKBQ9Y6T7 804 aa6.9□□□□□ -1.31
SRGAP3-213ENST00000618999 LAMA2P24043 3122 aaKnown RBP6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 F5H5T6 163 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 NME4O00746 187 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 FGF10O15520 208 aaPredicted RBP6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 TGM5O43548 720 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 C8AP07357 584 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 THRBP10828 461 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 DCKP27707 260 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 GABRR2P28476 465 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 BMPR1AP36894 532 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 MAGEA10P43363 369 aaPredicted RBP6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 PSMD8P48556 350 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 BMXP51813 675 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 PFKPQ01813 784 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 CREMQ03060 361 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 IMPG1Q17R60 797 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 SLC36A3Q495N2 470 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 ANKS6Q68DC2 871 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 LCN8Q6JVE9 175 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 TMEM214Q6NUQ4 689 aaKnown RBP6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 CCDC80Q76M96 950 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 SLC15A3Q8IY34 581 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 LGI2Q8N0V4 545 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 CFAP52Q8N1V2 620 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 PELI3Q8N2H9 469 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 FBXO39Q8N4B4 442 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 KREMEN2Q8NCW0 462 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 TBC1D15Q8TC07 691 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 MRPS31Q92665 395 aaKnown RBP6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 ITPKCQ96DU7 683 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 CYP2S1Q96SQ9 504 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 CHID1Q9BWS9 393 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 LGR4Q9BXB1 951 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 AGPAT4Q9NRZ5 378 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 IL37Q9NZH6 218 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 UXTQ9UBK9 157 aaPredicted RBP6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 PRKAB1Q9Y478 270 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 SLC30A1Q9Y6M5 507 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 RHOBTB1O94844 696 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 SNAP29O95721 258 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 GLP2RO95838 553 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 AGR2O95994 175 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 GLUD1P00367 558 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 PCNAP12004 261 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 MYOGP15173 224 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 HOXB8P17481 243 aaPredicted RBP6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 CCNCP24863 283 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 GSK3BP49841 420 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 ARHGDIAP52565 204 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 WNT3AP56704 352 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 ERVFC1P60507 584 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 FOXM1Q08050 763 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 SEMA3BQ13214 749 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 TUBA3CQ13748 450 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 TCEA2Q15560 299 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 MAPK11Q15759 364 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 ATP6AP1Q15904 470 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 DGUOKQ16854 277 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 TIGD2Q4W5G0 525 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 MS4A13Q5J8X5 152 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 PIK3R6Q5UE93 754 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 FBXL22Q6P050 247 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 CCDC149Q6ZUS6 474 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 LYSMD3Q7Z3D4 306 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 C2CD4AQ8NCU7 369 aaPredicted RBP6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 RORBQ92753 470 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 BHMTQ93088 406 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 SLCO4A1Q96BD0 722 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 MYRFLQ96LU7 910 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 DCBLD2Q96PD2 775 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 FCRL5Q96RD9 977 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 UHRF1Q96T88 793 aaPredicted RBP6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 CORO1BQ9BR76 489 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 ZYG11BQ9C0D3 744 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 SOX17Q9H6I2 414 aaPredicted RBP6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 NT5MQ9NPB1 228 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 DUS2Q9NX74 493 aaKnown RBP6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 ACTR10Q9NZ32 417 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms