RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 GALNT2Q10471 571 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 GPR19Q15760 415 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 SEPT7Q16181 437 aaKnown RBP4.44□□□□□ -1.7
SNCA-213ENST00000618500 CYP2A13Q16696 494 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 ZNF658BQ4V348 819 aaPredicted RBP4.44□□□□□ -1.7
SNCA-213ENST00000618500 RAB6CQ53S08 254 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 LDLRAP1Q5SW96 308 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 IRGCQ6NXR0 463 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 FAM199XQ6PEV8 388 aaPredicted RBP4.44□□□□□ -1.7
SNCA-213ENST00000618500 GJB7Q6PEY0 223 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 RIPOR1Q6ZS17 1223 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 FJX1Q86VR8 437 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 LGI4Q8N135 537 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 PYROXD2Q8N2H3 581 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 CCHCR1Q8TD31 782 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 NSMCE1Q8WV22 266 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 ASB5Q8WWX0 329 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 TRIB3Q96RU7 358 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 KCTD15Q96SI1 283 aaPredicted RBP4.44□□□□□ -1.7
SNCA-213ENST00000618500 MAP3K3Q99759 626 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 VKORC1Q9BQB6 163 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 RAB6CQ9H0N0 254 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 GANQ9H2C0 597 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 AKIRIN1Q9H9L7 192 aaPredicted RBP4.44□□□□□ -1.7
SNCA-213ENST00000618500 GPAMQ9HCL2 828 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 NDOR1Q9UHB4 597 aa4.44□□□□□ -1.7
SNCA-213ENST00000618500 IDSB3KWA1 339 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 CCL21O00585 134 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 PRLP01236 227 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 MMEP08473 750 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 HOXD4P09016 255 aaPredicted RBP4.43□□□□□ -1.7
SNCA-213ENST00000618500 ERCC2P18074 760 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 TNFAIP3P21580 790 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 DNAJA1P31689 397 aaKnown RBP4.43□□□□□ -1.7
SNCA-213ENST00000618500 KIR3DL1P43629 444 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 ART1P52961 327 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 Q0VFX4 171 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 PAFAH1B3Q15102 231 aaKnown RBP4.43□□□□□ -1.7
SNCA-213ENST00000618500 IRAK1BP1Q5VVH5 260 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 NAA35Q5VZE5 725 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 METRNLQ641Q3 311 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 DUS1LQ6P1R4 473 aaKnown RBP4.43□□□□□ -1.7
SNCA-213ENST00000618500 VSIG1Q86XK7 387 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 EMC1Q8N766 993 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 SCMH1Q96GD3 660 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 GPR137Q96N19 417 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 KCNK17Q96T54 332 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 SEC14L3Q9UDX4 400 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 SLC23A2Q9UGH3 650 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 KLHL3Q9UH77 587 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 SLC24A2Q9UI40 661 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 FBXL4Q9UKA2 621 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 FER1L5A0AVI2 2057 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 CACNA1DQ01668 2161 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 IGLV3-12A0A075B6K2 115 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 PRAMEF2O60811 474 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 PRAMEF1O95521 474 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 TYRP1P17643 537 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 CCNCP24863 283 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 ARSFP54793 590 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 KRTAP10-9P60411 292 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 DSC2Q02487 901 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 CDC16Q13042 620 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 GTF2H3Q13889 308 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 MARC1Q5VT66 337 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 WDR59Q6PJI9 974 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 GFRALQ6UXV0 394 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 NAPRTQ6XQN6 538 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 OVCH1Q7RTY7 1134 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 DMRTC2Q8IXT2 367 aaPredicted RBP4.43□□□□□ -1.7
SNCA-213ENST00000618500 NIPA2Q8N8Q9 360 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 ACVR1CQ8NER5 493 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 ARRDC2Q8TBH0 407 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 DNAJB14Q8TBM8 379 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 ADAMTS18Q8TE60 1221 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.43□□□□□ -1.7
SNCA-213ENST00000618500 CLIP3Q96DZ5 547 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 ELMO2Q96JJ3 720 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 TRABDQ9H4I3 376 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 LUC7LQ9NQ29 371 aaKnown RBP4.43□□□□□ -1.7
SNCA-213ENST00000618500 CTNND2Q9UQB3 1225 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 PCDHGC4Q9Y5F7 938 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 COLEC10Q9Y6Z7 277 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 LOC102723996A0A087X1L8 192 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 C17orf113A0A1B0GUU1 675 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 C19orf84I3L1E1 186 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 MATN3O15232 486 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 ASMTLO95671 621 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 IFI35P80217 286 aaPredicted RBP4.43□□□□□ -1.7
SNCA-213ENST00000618500 RPA4Q13156 261 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 KCNAB1Q14722 419 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 INSCQ1MX18 579 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 VWA3BQ502W6 1294 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 ANKRD20A8PQ5CZ79 823 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 CCDC183Q5T5S1 534 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 TMEM211Q6ICI0 200 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 ARMC6Q6NXE6 501 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 H3F3CQ6NXT2 135 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 TMEM207Q6UWW9 146 aa4.43□□□□□ -1.7
SNCA-213ENST00000618500 B4GALNT4Q76KP1 1039 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms